SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    501801 6kxl:B (1.35) BS02 NAG ? GO:0004553 ... F8WSX2 N/A
    501802 6kxl:B (1.35) BS03 MXE ? GO:0004553 ... F8WSX2 N/A
    501803 6kxl:B (1.35) BS04 NAG ? GO:0004553 ... F8WSX2 N/A
    501804 6kxm:A (1.95) BS01 NAG ? GO:0004553 ... F8WSX2 N/A
    501805 6kxm:A (1.95) BS02 NAG ? GO:0004553 ... F8WSX2 N/A
    501806 6kxm:B (1.95) BS01 NAG ? GO:0004553 ... F8WSX2 N/A
    501807 6kxm:B (1.95) BS02 NAG ? GO:0004553 ... F8WSX2 N/A
    501808 6kxn:A (1.5) BS01 NAG ? GO:0004553 ... F8WSX2 N/A
    501809 6kxn:A (1.5) BS02 NAG ? GO:0004553 ... F8WSX2 N/A
    501810 6kxn:B (1.5) BS01 NAG ? GO:0004553 ... F8WSX2 N/A
    501811 6kxn:B (1.5) BS02 NAG ? GO:0004553 ... F8WSX2 N/A
    501812 6kxo:A (1.49) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501813 6kxo:A (1.49) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501814 6kxo:A (1.49) BS03 MG 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501815 6kxo:A (1.49) BS04 MG 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501816 6kxo:A (1.49) BS05 NO9 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501817 6kxo:A (1.49) BS06 NO9 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501818 6kxo:B (1.49) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501819 6kxo:B (1.49) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501820 6kxo:B (1.49) BS03 MG 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501821 6kxo:B (1.49) BS04 MG 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501822 6kxo:B (1.49) BS05 NO9 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501823 6kxu:A (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501824 6kxu:B (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501825 6kxu:C (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501826 6kxu:D (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501827 6kxu:D (2.83) BS02 MN ? GO:0005544 ... Q941L3 N/A
    501828 6kxu:E (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501829 6kxu:F (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501830 6kxu:F (2.83) BS02 MN ? GO:0005544 ... Q941L3 N/A
    501831 6kxu:G (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501832 6kxu:H (2.83) BS01 MN ? GO:0005544 ... Q941L3 N/A
    501833 6kxv:A (3.63) BS01 dna ? GO:0000786 ... Q4QHB5 31722422
    501834 6kxv:A (3.63) BS02 dna ? GO:0000786 ... Q4QHB5 31722422
    501835 6kxv:B (3.63) BS01 dna ? GO:0000781 ... P62805 31722422
    501836 6kxv:B (3.63) BS02 dna ? GO:0000781 ... P62805 31722422
    501837 6kxv:C (3.63) BS01 dna ? GO:0000786 ... P04908 31722422
    501838 6kxv:C (3.63) BS02 dna ? GO:0000786 ... P04908 31722422
    501839 6kxv:D (3.63) BS01 dna ? GO:0000786 ... P06899 31722422
    501840 6kxv:D (3.63) BS02 dna ? GO:0000786 ... P06899 31722422
    501841 6kxv:E (3.63) BS01 dna ? GO:0000786 ... Q4QHB5 31722422
    501842 6kxv:E (3.63) BS02 dna ? GO:0000786 ... Q4QHB5 31722422
    501843 6kxv:F (3.63) BS01 dna ? GO:0000781 ... P62805 31722422
    501844 6kxv:F (3.63) BS02 dna ? GO:0000781 ... P62805 31722422
    501845 6kxv:G (3.63) BS01 dna ? GO:0000786 ... P04908 31722422
    501846 6kxv:G (3.63) BS02 dna ? GO:0000786 ... P04908 31722422
    501847 6kxv:H (3.63) BS01 dna ? GO:0000786 ... P06899 31722422
    501848 6kxv:H (3.63) BS02 dna ? GO:0000786 ... P06899 31722422
    501849 6kxx:A (1.95) BS01 peptide ? GO:0003677 ... Q07869 32376995
    501850 6kxx:A (1.95) BS02 T02 ? GO:0003677 ... Q07869 32376995 BindingDB: EC50=660nM
    501851 6kxy:A (2.0) BS01 peptide ? GO:0003677 ... Q07869 32376995
    501852 6kxy:A (2.0) BS02 T06 ? GO:0003677 ... Q07869 32376995 BindingDB: EC50=1530nM
    501853 6ky3:A (1.34) BS01 ARG 2.7.3.3 GO:0003824 ... A0A0A7CK57 32863281
    501854 6ky4:A (3.2) BS01 ADP 1.8.98.2 GO:0032542 ... Q8GY89 31604522
    501855 6ky6:A (2.07) BS01 NAP ? GO:0000166 ... Q9X265 31573681
    501856 6ky6:A (2.07) BS02 EPR ? GO:0000166 ... Q9X265 31573681
    501857 6ky6:B (2.07) BS01 NAP ? GO:0000166 ... Q9X265 31573681
    501858 6ky6:B (2.07) BS02 EPR ? GO:0000166 ... Q9X265 31573681
    501859 6ky7:A (2.27) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    501860 6ky7:A (2.27) BS02 HEM 1.11.1.7 GO:0004601 ... P80025 N/A
    501861 6ky7:A (2.27) BS03 OSM 1.11.1.7 GO:0004601 ... P80025 N/A
    501862 6ky7:A (2.27) BS04 OSM 1.11.1.7 GO:0004601 ... P80025 N/A
    501863 6ky7:A (2.27) BS05 OSM 1.11.1.7 GO:0004601 ... P80025 N/A
    501864 6ky7:A (2.27) BS06 OSM 1.11.1.7 GO:0004601 ... P80025 N/A
    501865 6ky9:A (1.7) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501866 6ky9:A (1.7) BS02 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501867 6ky9:B (1.7) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501868 6ky9:B (1.7) BS02 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501869 6ky9:C (1.7) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501870 6ky9:C (1.7) BS02 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31662460
    501871 6kya:A (2.89) BS01 DY3 ? GO:0002224 ... Q9NR97 32233366 BindingDB: IC50=30nM, Kd=225nM
    501872 6kya:A (2.89) BS02 DY3 ? GO:0002224 ... Q9NR97 32233366 BindingDB: IC50=30nM, Kd=225nM
    501873 6kya:B (2.89) BS01 DY3 ? GO:0002224 ... Q9NR97 32233366 BindingDB: IC50=30nM, Kd=225nM
    501874 6kya:B (2.89) BS02 DY3 ? GO:0002224 ... Q9NR97 32233366 BindingDB: IC50=30nM, Kd=225nM
    501875 6kye:A (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501876 6kye:B (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501877 6kye:C (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501878 6kye:D (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501879 6kye:E (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501880 6kye:F (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501881 6kye:G (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501882 6kye:H (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501883 6kye:I (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501884 6kye:J (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501885 6kye:K (2.28) BS01 HEM ? GO:0004601 ... P69905 31840728
    501886 6kye:L (2.28) BS01 HEM ? GO:0004601 ... P68871 31840728
    501887 6kyf:A (3.07) BS01 NAD N/A N/A N/A 33049228
    501888 6kyh:E (3.3) BS01 GNP 3.6.5.2 GO:0003924 ... Q61411 31879129
    501889 6kyh:E (3.3) BS02 MG 3.6.5.2 GO:0003924 ... Q61411 31879129
    501890 6kyh:F (3.3) BS01 GNP 3.6.5.2 GO:0003924 ... Q61411 31879129
    501891 6kyh:F (3.3) BS02 MG 3.6.5.2 GO:0003924 ... Q61411 31879129
    501892 6kyh:G (3.3) BS01 GNP 3.6.5.2 GO:0003924 ... Q61411 31879129
    501893 6kyh:G (3.3) BS02 MG 3.6.5.2 GO:0003924 ... Q61411 31879129
    501894 6kyh:H (3.3) BS01 GNP 3.6.5.2 GO:0003924 ... Q61411 31879129
    501895 6kyh:H (3.3) BS02 MG 3.6.5.2 GO:0003924 ... Q61411 31879129
    501896 6kyk:C (2.82) BS01 GNP 3.6.5.2 GO:0003924 ... P61224 31879129
    501897 6kyk:C (2.82) BS02 MG 3.6.5.2 GO:0003924 ... P61224 31879129
    501898 6kyk:D (2.82) BS01 GNP 3.6.5.2 GO:0003924 ... P61224 31879129
    501899 6kyk:D (2.82) BS02 MG 3.6.5.2 GO:0003924 ... P61224 31879129
    501900 6kyk:E (2.82) BS01 GNP 3.6.5.2 GO:0003924 ... P61224 31879129
    501901 6kyk:E (2.82) BS02 MG 3.6.5.2 GO:0003924 ... P61224 31879129
    501902 6kyk:F (2.82) BS01 GNP 3.6.5.2 GO:0003924 ... P61224 31879129
    501903 6kyk:F (2.82) BS02 MG 3.6.5.2 GO:0003924 ... P61224 31879129
    501904 6kyl:B (3.55) BS01 44E ? GO:0005515 ... Q05776 32843686
    501905 6kyl:D (3.55) BS01 44E ? GO:0005515 ... Q05776 32843686
    501906 6kyp:A (2.86) BS01 GW9 ? GO:0003677 ... Q07869 33205029
    501907 6kyp:A (2.86) BS02 GW9 ? GO:0003677 ... Q07869 33205029
    501908 6kyp:A (2.86) BS03 GW9 ? GO:0003677 ... Q07869 33205029
    501909 6kyp:B (2.86) BS01 GW9 ? GO:0003677 ... Q07869 33205029
    501910 6kyp:B (2.86) BS02 GW9 ? GO:0003677 ... Q07869 33205029
    501911 6kyp:B (2.86) BS03 GW9 ? GO:0003677 ... Q07869 33205029
    501912 6kyp:B (2.86) BS04 E0O ? GO:0003677 ... Q07869 33205029 BindingDB: EC50=55000nM
    501913 6kyu:A (1.5) BS01 peptide ? N/A A0A2Z4U0R6 N/A
    501914 6kyv:B (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501915 6kyv:B (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501916 6kyv:D (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501917 6kyv:D (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501918 6kyv:F (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501919 6kyv:F (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501920 6kyv:H (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501921 6kyv:H (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501922 6kyv:J (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501923 6kyv:J (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501924 6kyv:L (3.0) BS01 rna 3.6.4.13 GO:0003676 ... O95786 31852354
    501925 6kyv:L (3.0) BS02 ZN 3.6.4.13 GO:0003676 ... O95786 31852354
    501926 6kyy:A (2.8) BS01 FAD ? GO:0003955 ... P77212 31988242
    501927 6kyy:A (2.8) BS02 CU ? GO:0003955 ... P77212 31988242
    501928 6kyy:A (2.8) BS03 CU ? GO:0003955 ... P77212 31988242
    501929 6kyy:B (2.8) BS01 FAD ? GO:0003955 ... P77212 31988242
    501930 6kyy:B (2.8) BS02 CU ? GO:0003955 ... P77212 31988242
    501931 6kyy:B (2.8) BS03 CU ? GO:0003955 ... P77212 31988242
    501932 6kyy:C (2.8) BS01 FAD ? GO:0003955 ... P77212 31988242
    501933 6kyy:D (2.8) BS01 FAD ? GO:0003955 ... P77212 31988242
    501934 6kyy:D (2.8) BS02 CU ? GO:0003955 ... P77212 31988242
    501935 6kz1:A (1.694) BS01 peptide ? N/A Q9P202 33626355
    501936 6kz5:B (4.45) BS01 E4L ? GO:0003677 ... P22736 33087562 BindingDB: EC50=0.2780nM, Kd=1510nM
    501937 6kz6:A (2.187) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31748385
    501938 6kz6:B (2.187) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31748385
    501939 6kz6:B (2.187) BS02 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31748385
    501940 6kz6:C (2.187) BS01 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31748385
    501941 6kz6:C (2.187) BS02 UMP 3.6.1.23 GO:0004170 ... A0A2X0SE53 31748385
    501942 6kz8:A (2.291) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    501943 6kz8:B (2.291) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    501944 6kz9:A (1.801) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    501945 6kzb:A (3.55) BS01 GDP 2.3.1.-
    2.3.2.13
    3.4.-.-
    3.5.1.44
    GO:0000785 ... P21980 31991788
    501946 6kzb:B (3.55) BS01 GDP 2.3.1.-
    2.3.2.13
    3.4.-.-
    3.5.1.44
    GO:0000785 ... P21980 31991788
    501947 6kzb:C (3.55) BS01 GDP 2.3.1.-
    2.3.2.13
    3.4.-.-
    3.5.1.44
    GO:0000785 ... P21980 31991788
    501948 6kzc:A (2.0) BS01 DZC 2.7.10.1 GO:0004672 ... Q16288 31271959 MOAD: ic50=11.46nM
    501949 6kzd:A (1.708) BS01 DZ6 2.7.10.1 GO:0004672 ... Q16288 31271959 MOAD: ic50=2.95nM
    501950 6kze:A (2.50003) BS01 DZU 3.1.4.17 GO:0004114 ... Q9Y233 N/A
    501951 6kze:A (2.50003) BS02 ZN 3.1.4.17 GO:0004114 ... Q9Y233 N/A
    501952 6kze:B (2.50003) BS01 DZU 3.1.4.17 GO:0004114 ... Q9Y233 N/A
    501953 6kze:B (2.50003) BS02 ZN 3.1.4.17 GO:0004114 ... Q9Y233 N/A
    501954 6kzg:A (2.0) BS01 peptide ? GO:0005515 ... P27348 N/A
    501955 6kzg:B (2.0) BS01 peptide ? GO:0005515 ... P27348 N/A
    501956 6kzh:A (2.645) BS01 peptide ? GO:0005515 ... P27348 N/A
    501957 6kzh:B (2.645) BS01 peptide ? GO:0005515 ... P27348 N/A
    501958 6kzi:A (2.8) BS01 RTX 2.7.11.1 GO:0004672 ... P11309 32407627
    501959 6kzk:A (2.789) BS01 BEM ? N/A A0A249T061 31682837
    501960 6kzk:A (2.789) BS02 BEM ? N/A A0A249T061 31682837
    501961 6kzk:A (2.789) BS03 BEM ? N/A A0A249T061 31682837
    501962 6kzk:A (2.789) BS04 CA ? N/A A0A249T061 31682837
    501963 6kzk:B (2.789) BS01 BEM ? N/A A0A249T061 31682837
    501964 6kzk:B (2.789) BS02 BEM ? N/A A0A249T061 31682837
    501965 6kzk:B (2.789) BS03 BEM ? N/A A0A249T061 31682837
    501966 6kzk:B (2.789) BS04 CA ? N/A A0A249T061 31682837
    501967 6kzk:C (2.789) BS01 BEM ? N/A A0A249T061 31682837
    501968 6kzk:C (2.789) BS02 BEM ? N/A A0A249T061 31682837
    501969 6kzk:C (2.789) BS03 BEM ? N/A A0A249T061 31682837
    501970 6kzk:C (2.789) BS04 CA ? N/A A0A249T061 31682837
    501971 6kzl:A (1.763) BS01 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501972 6kzl:A (1.763) BS02 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501973 6kzl:A (1.763) BS03 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501974 6kzl:A (1.763) BS04 E1C 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501975 6kzl:B (1.763) BS01 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501976 6kzl:B (1.763) BS02 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501977 6kzl:B (1.763) BS03 ZN 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501978 6kzl:B (1.763) BS04 E1C 3.5.2.6 GO:0046872 ... E5KIY2 32184250
    501979 6kzn:A (1.5) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501980 6kzn:A (1.5) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501981 6kzn:A (1.5) BS03 E1C 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501982 6kzn:B (1.5) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501983 6kzn:B (1.5) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501984 6kzn:B (1.5) BS03 E1C 3.5.2.6 GO:0016787 ... Q9K2N0 32184250
    501985 6kzo:A (3.3) BS01 Y01 ? GO:0001508 ... O43497 31766050
    501986 6kzo:A (3.3) BS02 Y01 ? GO:0001508 ... O43497 31766050
    501987 6kzp:A (3.1) BS01 CA ? GO:0005216 ... O43497 31766050
    501988 6kzp:A (3.1) BS02 DZR ? GO:0005216 ... O43497 31766050 BindingDB: IC50=37nM
    501989 6kzp:A (3.1) BS03 Y01 ? GO:0005216 ... O43497 31766050
    501990 6kzp:A (3.1) BS04 Y01 ? GO:0005216 ... O43497 31766050
    501991 6kzp:A (3.1) BS05 Y01 ? GO:0005216 ... O43497 31766050
    501992 6kzq:A (1.7) BS01 peptide 3.1.3.48 GO:0004725 ... P43378 33764618
    501993 6kzr:A (2.304) BS01 CA ? N/A Q9D8Q7 32139512
    501994 6kzr:B (2.304) BS01 CA ? N/A Q9D8Q7 32139512
    501995 6kzs:A (1.601) BS01 HEM 1.14.-.- GO:0004497 ... Q4H2B8 N/A
    501996 6kzt:A (3.5) BS01 HEM 1.14.-.- GO:0004497 ... Q4H2B8 N/A
    501997 6kzu:A (1.79) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 32874502
    501998 6kzv:A (2.4) BS01 E0F 5.6.2.2 GO:0003677 ... P0AES6 32391502 MOAD: ic50=5.4uM
    501999 6kzx:A (2.1) BS01 E0L 5.6.2.2 GO:0003677 ... P0AES6 32391502 MOAD: ic50=0.2uM
    502000 6kzy:A (2.30057) BS01 CU 1.16.3.1 GO:0004322 ... D3JCC5 35359603

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).