SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    502601 6l4a:E (12.3) BS02 dna ? GO:0000786 ... P68431 31711756
    502602 6l4a:F (12.3) BS01 dna ? GO:0000781 ... P62805 31711756
    502603 6l4a:F (12.3) BS02 dna ? GO:0000781 ... P62805 31711756
    502604 6l4a:G (12.3) BS01 dna ? GO:0000786 ... P04908 31711756
    502605 6l4a:G (12.3) BS02 dna ? GO:0000786 ... P04908 31711756
    502606 6l4a:H (12.3) BS01 dna ? GO:0000786 ... P06899 31711756
    502607 6l4a:H (12.3) BS02 dna ? GO:0000786 ... P06899 31711756
    502608 6l4a:K (12.3) BS01 dna ? GO:0000786 ... P68431 31711756
    502609 6l4a:K (12.3) BS02 dna ? GO:0000786 ... P68431 31711756
    502610 6l4a:L (12.3) BS01 dna ? GO:0000781 ... P62805 31711756
    502611 6l4a:L (12.3) BS02 dna ? GO:0000781 ... P62805 31711756
    502612 6l4a:M (12.3) BS01 dna ? GO:0000786 ... P04908 31711756
    502613 6l4a:M (12.3) BS02 dna ? GO:0000786 ... P04908 31711756
    502614 6l4a:N (12.3) BS01 dna ? GO:0000786 ... P06899 31711756
    502615 6l4a:N (12.3) BS02 dna ? GO:0000786 ... P06899 31711756
    502616 6l4a:O (12.3) BS01 dna ? GO:0000786 ... P68431 31711756
    502617 6l4a:O (12.3) BS02 dna ? GO:0000786 ... P68431 31711756
    502618 6l4a:P (12.3) BS01 dna ? GO:0000781 ... P62805 31711756
    502619 6l4a:P (12.3) BS02 dna ? GO:0000781 ... P62805 31711756
    502620 6l4a:Q (12.3) BS01 dna ? GO:0000786 ... P04908 31711756
    502621 6l4a:Q (12.3) BS02 dna ? GO:0000786 ... P04908 31711756
    502622 6l4a:R (12.3) BS01 dna ? GO:0000786 ... P06899 31711756
    502623 6l4a:R (12.3) BS02 dna ? GO:0000786 ... P06899 31711756
    502624 6l4a:S (12.3) BS01 dna ? GO:0000786 ... P68431 31711756
    502625 6l4a:S (12.3) BS02 dna ? GO:0000786 ... P68431 31711756
    502626 6l4a:T (12.3) BS01 dna ? GO:0000781 ... P62805 31711756
    502627 6l4a:T (12.3) BS02 dna ? GO:0000781 ... P62805 31711756
    502628 6l4a:U (12.3) BS01 dna ? GO:0000786 ... P04908 31711756
    502629 6l4a:U (12.3) BS02 dna ? GO:0000786 ... P04908 31711756
    502630 6l4a:V (12.3) BS01 dna ? GO:0000786 ... P06899 31711756
    502631 6l4a:V (12.3) BS02 dna ? GO:0000786 ... P06899 31711756
    502632 6l4a:W (12.3) BS01 dna ? GO:0000786 ... P68431 31711756
    502633 6l4a:W (12.3) BS02 dna ? GO:0000786 ... P68431 31711756
    502634 6l4a:X (12.3) BS01 dna ? GO:0000781 ... P62805 31711756
    502635 6l4a:X (12.3) BS02 dna ? GO:0000781 ... P62805 31711756
    502636 6l4a:Y (12.3) BS01 dna ? GO:0000786 ... P04908 31711756
    502637 6l4a:Y (12.3) BS02 dna ? GO:0000786 ... P04908 31711756
    502638 6l4a:Z (12.3) BS01 dna ? GO:0000786 ... P06899 31711756
    502639 6l4a:Z (12.3) BS02 dna ? GO:0000786 ... P06899 31711756
    502640 6l4c:A (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    502641 6l4c:B (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    502642 6l4c:C (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    502643 6l4k:A (2.09) BS01 E5O ? GO:0003677 ... P02768 31693353
    502644 6l4m:A (3.302) BS01 SAL ? N/A B0JEU3 31753489
    502645 6l4n:A (2.431) BS01 MG ? GO:0004869 ... P02881
    P02882
    N/A
    502646 6l4n:A (2.431) BS02 MG ? GO:0004869 ... P02881
    P02882
    N/A
    502647 6l4n:A (2.431) BS03 MG ? GO:0004869 ... P02881
    P02882
    N/A
    502648 6l4q:A (3.1) BS01 E5R 6.1.1.6 GO:0000166 ... Q8IDJ8 N/A
    502649 6l4q:A (3.1) BS02 LYS 6.1.1.6 GO:0000166 ... Q8IDJ8 N/A
    502650 6l4q:B (3.1) BS01 E5R 6.1.1.6 GO:0000166 ... Q8IDJ8 N/A
    502651 6l4q:B (3.1) BS02 LYS 6.1.1.6 GO:0000166 ... Q8IDJ8 N/A
    502652 6l4t:10 (2.6) BS01 KC1 N/A GO:0009765 ... N/A N/A
    502653 6l4t:10 (2.6) BS02 KC1 N/A GO:0009765 ... N/A N/A
    502654 6l4t:10 (2.6) BS03 A86 N/A GO:0009765 ... N/A N/A
    502655 6l4t:10 (2.6) BS04 A86 N/A GO:0009765 ... N/A N/A
    502656 6l4t:10 (2.6) BS05 A86 N/A GO:0009765 ... N/A N/A
    502657 6l4t:10 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502658 6l4t:10 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502659 6l4t:10 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502660 6l4t:10 (2.6) BS09 KC1 N/A GO:0009765 ... N/A N/A
    502661 6l4t:10 (2.6) BS10 CLA N/A GO:0009765 ... N/A N/A
    502662 6l4t:10 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502663 6l4t:10 (2.6) BS12 CLA N/A GO:0009765 ... N/A N/A
    502664 6l4t:10 (2.6) BS13 KC1 N/A GO:0009765 ... N/A N/A
    502665 6l4t:10 (2.6) BS14 CLA N/A GO:0009765 ... N/A N/A
    502666 6l4t:10 (2.6) BS15 KC1 N/A GO:0009765 ... N/A N/A
    502667 6l4t:10 (2.6) BS16 DD6 N/A GO:0009765 ... N/A N/A
    502668 6l4t:10 (2.6) BS17 DD6 N/A GO:0009765 ... N/A N/A
    502669 6l4t:10 (2.6) BS18 A86 N/A GO:0009765 ... N/A N/A
    502670 6l4t:10 (2.6) BS19 A86 N/A GO:0009765 ... N/A N/A
    502671 6l4t:10 (2.6) BS20 A86 N/A GO:0009765 ... N/A N/A
    502672 6l4t:11 (2.6) BS01 KC1 N/A GO:0009765 ... N/A N/A
    502673 6l4t:11 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502674 6l4t:11 (2.6) BS03 KC1 N/A GO:0009765 ... N/A N/A
    502675 6l4t:11 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502676 6l4t:11 (2.6) BS05 KC1 N/A GO:0009765 ... N/A N/A
    502677 6l4t:11 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502678 6l4t:11 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502679 6l4t:11 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502680 6l4t:11 (2.6) BS09 KC1 N/A GO:0009765 ... N/A N/A
    502681 6l4t:11 (2.6) BS10 KC1 N/A GO:0009765 ... N/A N/A
    502682 6l4t:11 (2.6) BS11 DD6 N/A GO:0009765 ... N/A N/A
    502683 6l4t:11 (2.6) BS12 A86 N/A GO:0009765 ... N/A N/A
    502684 6l4t:11 (2.6) BS13 A86 N/A GO:0009765 ... N/A N/A
    502685 6l4t:11 (2.6) BS14 A86 N/A GO:0009765 ... N/A N/A
    502686 6l4t:12 (2.6) BS01 CLA N/A GO:0009765 ... N/A N/A
    502687 6l4t:12 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502688 6l4t:12 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502689 6l4t:12 (2.6) BS04 KC1 N/A GO:0009765 ... N/A N/A
    502690 6l4t:12 (2.6) BS05 CLA N/A GO:0009765 ... N/A N/A
    502691 6l4t:12 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502692 6l4t:12 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502693 6l4t:12 (2.6) BS08 KC1 N/A GO:0009765 ... N/A N/A
    502694 6l4t:12 (2.6) BS09 CLA N/A GO:0009765 ... N/A N/A
    502695 6l4t:12 (2.6) BS10 KC1 N/A GO:0009765 ... N/A N/A
    502696 6l4t:12 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502697 6l4t:12 (2.6) BS12 KC1 N/A GO:0009765 ... N/A N/A
    502698 6l4t:12 (2.6) BS13 A86 N/A GO:0009765 ... N/A N/A
    502699 6l4t:12 (2.6) BS14 DD6 N/A GO:0009765 ... N/A N/A
    502700 6l4t:12 (2.6) BS15 A86 N/A GO:0009765 ... N/A N/A
    502701 6l4t:12 (2.6) BS16 DD6 N/A GO:0009765 ... N/A N/A
    502702 6l4t:12 (2.6) BS17 CLA N/A GO:0009765 ... N/A N/A
    502703 6l4t:12 (2.6) BS18 A86 N/A GO:0009765 ... N/A N/A
    502704 6l4t:13 (2.6) BS01 CLA N/A GO:0009765 ... N/A N/A
    502705 6l4t:13 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502706 6l4t:13 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502707 6l4t:13 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502708 6l4t:13 (2.6) BS05 CLA N/A GO:0009765 ... N/A N/A
    502709 6l4t:13 (2.6) BS06 KC1 N/A GO:0009765 ... N/A N/A
    502710 6l4t:13 (2.6) BS07 KC1 N/A GO:0009765 ... N/A N/A
    502711 6l4t:13 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502712 6l4t:13 (2.6) BS09 KC1 N/A GO:0009765 ... N/A N/A
    502713 6l4t:13 (2.6) BS10 CLA N/A GO:0009765 ... N/A N/A
    502714 6l4t:13 (2.6) BS11 KC1 N/A GO:0009765 ... N/A N/A
    502715 6l4t:13 (2.6) BS12 KC1 N/A GO:0009765 ... N/A N/A
    502716 6l4t:13 (2.6) BS13 KC1 N/A GO:0009765 ... N/A N/A
    502717 6l4t:13 (2.6) BS14 A86 N/A GO:0009765 ... N/A N/A
    502718 6l4t:13 (2.6) BS15 DD6 N/A GO:0009765 ... N/A N/A
    502719 6l4t:13 (2.6) BS16 A86 N/A GO:0009765 ... N/A N/A
    502720 6l4t:13 (2.6) BS17 KC1 N/A GO:0009765 ... N/A N/A
    502721 6l4t:14 (2.6) BS01 CLA N/A GO:0009765 ... N/A N/A
    502722 6l4t:14 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502723 6l4t:14 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502724 6l4t:14 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502725 6l4t:14 (2.6) BS05 CLA N/A GO:0009765 ... N/A N/A
    502726 6l4t:14 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502727 6l4t:14 (2.6) BS07 KC1 N/A GO:0009765 ... N/A N/A
    502728 6l4t:14 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502729 6l4t:14 (2.6) BS09 KC1 N/A GO:0009765 ... N/A N/A
    502730 6l4t:14 (2.6) BS10 CLA N/A GO:0009765 ... N/A N/A
    502731 6l4t:14 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502732 6l4t:14 (2.6) BS12 KC1 N/A GO:0009765 ... N/A N/A
    502733 6l4t:14 (2.6) BS13 CLA N/A GO:0009765 ... N/A N/A
    502734 6l4t:14 (2.6) BS14 CLA N/A GO:0009765 ... N/A N/A
    502735 6l4t:14 (2.6) BS15 A86 N/A GO:0009765 ... N/A N/A
    502736 6l4t:14 (2.6) BS16 A86 N/A GO:0009765 ... N/A N/A
    502737 6l4t:14 (2.6) BS17 A86 N/A GO:0009765 ... N/A N/A
    502738 6l4t:14 (2.6) BS18 A86 N/A GO:0009765 ... N/A N/A
    502739 6l4t:14 (2.6) BS19 A86 N/A GO:0009765 ... N/A N/A
    502740 6l4t:14 (2.6) BS20 A86 N/A GO:0009765 ... N/A N/A
    502741 6l4t:14 (2.6) BS21 A86 N/A GO:0009765 ... N/A N/A
    502742 6l4t:15 (2.6) BS01 CLA N/A GO:0009765 ... N/A N/A
    502743 6l4t:15 (2.6) BS02 A86 N/A GO:0009765 ... N/A N/A
    502744 6l4t:15 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502745 6l4t:15 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502746 6l4t:15 (2.6) BS05 CLA N/A GO:0009765 ... N/A N/A
    502747 6l4t:15 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502748 6l4t:15 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502749 6l4t:15 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502750 6l4t:15 (2.6) BS09 CLA N/A GO:0009765 ... N/A N/A
    502751 6l4t:15 (2.6) BS10 CLA N/A GO:0009765 ... N/A N/A
    502752 6l4t:15 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502753 6l4t:15 (2.6) BS12 CLA N/A GO:0009765 ... N/A N/A
    502754 6l4t:15 (2.6) BS13 CLA N/A GO:0009765 ... N/A N/A
    502755 6l4t:15 (2.6) BS14 CLA N/A GO:0009765 ... N/A N/A
    502756 6l4t:15 (2.6) BS15 CLA N/A GO:0009765 ... N/A N/A
    502757 6l4t:15 (2.6) BS16 A86 N/A GO:0009765 ... N/A N/A
    502758 6l4t:15 (2.6) BS17 A86 N/A GO:0009765 ... N/A N/A
    502759 6l4t:15 (2.6) BS18 A86 N/A GO:0009765 ... N/A N/A
    502760 6l4t:15 (2.6) BS19 DD6 N/A GO:0009765 ... N/A N/A
    502761 6l4t:15 (2.6) BS20 DD6 N/A GO:0009765 ... N/A N/A
    502762 6l4t:15 (2.6) BS21 A86 N/A GO:0009765 ... N/A N/A
    502763 6l4t:15 (2.6) BS22 A86 N/A GO:0009765 ... N/A N/A
    502764 6l4t:15 (2.6) BS23 A86 N/A GO:0009765 ... N/A N/A
    502765 6l4t:16 (2.6) BS01 KC1 N/A GO:0009765 ... N/A N/A
    502766 6l4t:16 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502767 6l4t:16 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502768 6l4t:16 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502769 6l4t:16 (2.6) BS05 KC1 N/A GO:0009765 ... N/A N/A
    502770 6l4t:16 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502771 6l4t:16 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502772 6l4t:16 (2.6) BS08 CLA N/A GO:0009765 ... N/A N/A
    502773 6l4t:16 (2.6) BS09 CLA N/A GO:0009765 ... N/A N/A
    502774 6l4t:16 (2.6) BS10 CLA N/A GO:0009765 ... N/A N/A
    502775 6l4t:16 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502776 6l4t:16 (2.6) BS12 KC1 N/A GO:0009765 ... N/A N/A
    502777 6l4t:16 (2.6) BS13 A86 N/A GO:0009765 ... N/A N/A
    502778 6l4t:16 (2.6) BS14 DD6 N/A GO:0009765 ... N/A N/A
    502779 6l4t:16 (2.6) BS15 A86 N/A GO:0009765 ... N/A N/A
    502780 6l4t:6 (2.6) BS01 CLA N/A GO:0009765 ... N/A N/A
    502781 6l4t:6 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A
    502782 6l4t:6 (2.6) BS03 CLA N/A GO:0009765 ... N/A N/A
    502783 6l4t:6 (2.6) BS04 CLA N/A GO:0009765 ... N/A N/A
    502784 6l4t:6 (2.6) BS05 KC1 N/A GO:0009765 ... N/A N/A
    502785 6l4t:6 (2.6) BS06 CLA N/A GO:0009765 ... N/A N/A
    502786 6l4t:6 (2.6) BS07 CLA N/A GO:0009765 ... N/A N/A
    502787 6l4t:6 (2.6) BS08 KC1 N/A GO:0009765 ... N/A N/A
    502788 6l4t:6 (2.6) BS09 KC1 N/A GO:0009765 ... N/A N/A
    502789 6l4t:6 (2.6) BS10 KC1 N/A GO:0009765 ... N/A N/A
    502790 6l4t:6 (2.6) BS11 CLA N/A GO:0009765 ... N/A N/A
    502791 6l4t:6 (2.6) BS12 CLA N/A GO:0009765 ... N/A N/A
    502792 6l4t:6 (2.6) BS13 CLA N/A GO:0009765 ... N/A N/A
    502793 6l4t:6 (2.6) BS14 CLA N/A GO:0009765 ... N/A N/A
    502794 6l4t:6 (2.6) BS15 DD6 N/A GO:0009765 ... N/A N/A
    502795 6l4t:6 (2.6) BS16 DD6 N/A GO:0009765 ... N/A N/A
    502796 6l4t:6 (2.6) BS17 A86 N/A GO:0009765 ... N/A N/A
    502797 6l4t:6 (2.6) BS18 DD6 N/A GO:0009765 ... N/A N/A
    502798 6l4t:6 (2.6) BS19 DD6 N/A GO:0009765 ... N/A N/A
    502799 6l4t:7 (2.6) BS01 DD6 N/A GO:0009765 ... N/A N/A
    502800 6l4t:7 (2.6) BS02 CLA N/A GO:0009765 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).