SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    503001 6l4u:2u (2.4) BS02 CLA N/A N/A N/A N/A
    503002 6l4u:2u (2.4) BS03 CLA N/A N/A N/A N/A
    503003 6l4u:2u (2.4) BS04 A86 N/A N/A N/A N/A
    503004 6l4u:2u (2.4) BS05 A86 N/A N/A N/A N/A
    503005 6l4u:3 (2.4) BS01 CLA N/A GO:0009765 ... N/A N/A
    503006 6l4u:3 (2.4) BS02 CLA N/A GO:0009765 ... N/A N/A
    503007 6l4u:3 (2.4) BS03 CLA N/A GO:0009765 ... N/A N/A
    503008 6l4u:3 (2.4) BS04 KC1 N/A GO:0009765 ... N/A N/A
    503009 6l4u:3 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503010 6l4u:3 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503011 6l4u:3 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503012 6l4u:3 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503013 6l4u:3 (2.4) BS09 CLA N/A GO:0009765 ... N/A N/A
    503014 6l4u:3 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503015 6l4u:3 (2.4) BS11 DD6 N/A GO:0009765 ... N/A N/A
    503016 6l4u:3 (2.4) BS12 DD6 N/A GO:0009765 ... N/A N/A
    503017 6l4u:3 (2.4) BS13 A86 N/A GO:0009765 ... N/A N/A
    503018 6l4u:3 (2.4) BS14 A86 N/A GO:0009765 ... N/A N/A
    503019 6l4u:3 (2.4) BS15 DD6 N/A GO:0009765 ... N/A N/A
    503020 6l4u:4 (2.4) BS01 CLA N/A GO:0009765 ... N/A N/A
    503021 6l4u:4 (2.4) BS02 CLA N/A GO:0009765 ... N/A N/A
    503022 6l4u:4 (2.4) BS03 CLA N/A GO:0009765 ... N/A N/A
    503023 6l4u:4 (2.4) BS04 CLA N/A GO:0009765 ... N/A N/A
    503024 6l4u:4 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503025 6l4u:4 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503026 6l4u:4 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503027 6l4u:4 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503028 6l4u:4 (2.4) BS09 KC1 N/A GO:0009765 ... N/A N/A
    503029 6l4u:4 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503030 6l4u:4 (2.4) BS11 CLA N/A GO:0009765 ... N/A N/A
    503031 6l4u:4 (2.4) BS12 KC1 N/A GO:0009765 ... N/A N/A
    503032 6l4u:4 (2.4) BS13 CLA N/A GO:0009765 ... N/A N/A
    503033 6l4u:4 (2.4) BS14 A86 N/A GO:0009765 ... N/A N/A
    503034 6l4u:4 (2.4) BS15 DD6 N/A GO:0009765 ... N/A N/A
    503035 6l4u:4 (2.4) BS16 A86 N/A GO:0009765 ... N/A N/A
    503036 6l4u:4 (2.4) BS17 A86 N/A GO:0009765 ... N/A N/A
    503037 6l4u:4 (2.4) BS18 DD6 N/A GO:0009765 ... N/A N/A
    503038 6l4u:4 (2.4) BS19 A86 N/A GO:0009765 ... N/A N/A
    503039 6l4u:4 (2.4) BS20 A86 N/A GO:0009765 ... N/A N/A
    503040 6l4u:5 (2.4) BS01 KC1 N/A GO:0009765 ... N/A N/A
    503041 6l4u:5 (2.4) BS02 CLA N/A GO:0009765 ... N/A N/A
    503042 6l4u:5 (2.4) BS03 CLA N/A GO:0009765 ... N/A N/A
    503043 6l4u:5 (2.4) BS04 CLA N/A GO:0009765 ... N/A N/A
    503044 6l4u:5 (2.4) BS05 KC1 N/A GO:0009765 ... N/A N/A
    503045 6l4u:5 (2.4) BS06 KC1 N/A GO:0009765 ... N/A N/A
    503046 6l4u:5 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503047 6l4u:5 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503048 6l4u:5 (2.4) BS09 CLA N/A GO:0009765 ... N/A N/A
    503049 6l4u:5 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503050 6l4u:5 (2.4) BS11 CLA N/A GO:0009765 ... N/A N/A
    503051 6l4u:5 (2.4) BS12 KC1 N/A GO:0009765 ... N/A N/A
    503052 6l4u:5 (2.4) BS13 DD6 N/A GO:0009765 ... N/A N/A
    503053 6l4u:5 (2.4) BS14 DD6 N/A GO:0009765 ... N/A N/A
    503054 6l4u:5 (2.4) BS15 A86 N/A GO:0009765 ... N/A N/A
    503055 6l4u:5 (2.4) BS16 A86 N/A GO:0009765 ... N/A N/A
    503056 6l4u:5 (2.4) BS17 DD6 N/A GO:0009765 ... N/A N/A
    503057 6l4u:6 (2.4) BS01 KC1 N/A GO:0009765 ... N/A N/A
    503058 6l4u:6 (2.4) BS02 DD6 N/A GO:0009765 ... N/A N/A
    503059 6l4u:6 (2.4) BS03 CLA N/A GO:0009765 ... N/A N/A
    503060 6l4u:6 (2.4) BS04 CLA N/A GO:0009765 ... N/A N/A
    503061 6l4u:6 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503062 6l4u:6 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503063 6l4u:6 (2.4) BS07 KC1 N/A GO:0009765 ... N/A N/A
    503064 6l4u:6 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503065 6l4u:6 (2.4) BS09 CLA N/A GO:0009765 ... N/A N/A
    503066 6l4u:6 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503067 6l4u:6 (2.4) BS11 KC1 N/A GO:0009765 ... N/A N/A
    503068 6l4u:6 (2.4) BS12 KC1 N/A GO:0009765 ... N/A N/A
    503069 6l4u:6 (2.4) BS13 CLA N/A GO:0009765 ... N/A N/A
    503070 6l4u:6 (2.4) BS14 CLA N/A GO:0009765 ... N/A N/A
    503071 6l4u:6 (2.4) BS15 CLA N/A GO:0009765 ... N/A N/A
    503072 6l4u:6 (2.4) BS16 CLA N/A GO:0009765 ... N/A N/A
    503073 6l4u:6 (2.4) BS17 DD6 N/A GO:0009765 ... N/A N/A
    503074 6l4u:6 (2.4) BS18 DD6 N/A GO:0009765 ... N/A N/A
    503075 6l4u:6 (2.4) BS19 A86 N/A GO:0009765 ... N/A N/A
    503076 6l4u:6 (2.4) BS20 DD6 N/A GO:0009765 ... N/A N/A
    503077 6l4u:6 (2.4) BS21 DD6 N/A GO:0009765 ... N/A N/A
    503078 6l4u:7 (2.4) BS01 CLA N/A GO:0009765 ... N/A N/A
    503079 6l4u:7 (2.4) BS02 DD6 N/A GO:0009765 ... N/A N/A
    503080 6l4u:7 (2.4) BS03 CLA N/A GO:0009765 ... N/A N/A
    503081 6l4u:7 (2.4) BS04 CLA N/A GO:0009765 ... N/A N/A
    503082 6l4u:7 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503083 6l4u:7 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503084 6l4u:7 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503085 6l4u:7 (2.4) BS08 KC1 N/A GO:0009765 ... N/A N/A
    503086 6l4u:7 (2.4) BS09 CLA N/A GO:0009765 ... N/A N/A
    503087 6l4u:7 (2.4) BS10 CLA N/A GO:0009765 ... N/A N/A
    503088 6l4u:7 (2.4) BS11 CLA N/A GO:0009765 ... N/A N/A
    503089 6l4u:7 (2.4) BS12 CLA N/A GO:0009765 ... N/A N/A
    503090 6l4u:7 (2.4) BS13 KC1 N/A GO:0009765 ... N/A N/A
    503091 6l4u:7 (2.4) BS14 DD6 N/A GO:0009765 ... N/A N/A
    503092 6l4u:7 (2.4) BS15 A86 N/A GO:0009765 ... N/A N/A
    503093 6l4u:7 (2.4) BS16 A86 N/A GO:0009765 ... N/A N/A
    503094 6l4u:7 (2.4) BS17 DD6 N/A GO:0009765 ... N/A N/A
    503095 6l4u:7 (2.4) BS18 DD6 N/A GO:0009765 ... N/A N/A
    503096 6l4u:7 (2.4) BS19 CLA N/A GO:0009765 ... N/A N/A
    503097 6l4u:8 (2.4) BS01 CLA N/A GO:0009765 ... N/A N/A
    503098 6l4u:8 (2.4) BS02 CLA N/A GO:0009765 ... N/A N/A
    503099 6l4u:8 (2.4) BS03 KC1 N/A GO:0009765 ... N/A N/A
    503100 6l4u:8 (2.4) BS04 A86 N/A GO:0009765 ... N/A N/A
    503101 6l4u:8 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503102 6l4u:8 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503103 6l4u:8 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503104 6l4u:8 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503105 6l4u:8 (2.4) BS09 CLA N/A GO:0009765 ... N/A N/A
    503106 6l4u:8 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503107 6l4u:8 (2.4) BS11 KC1 N/A GO:0009765 ... N/A N/A
    503108 6l4u:8 (2.4) BS12 CLA N/A GO:0009765 ... N/A N/A
    503109 6l4u:8 (2.4) BS13 CLA N/A GO:0009765 ... N/A N/A
    503110 6l4u:8 (2.4) BS14 KC1 N/A GO:0009765 ... N/A N/A
    503111 6l4u:8 (2.4) BS15 KC1 N/A GO:0009765 ... N/A N/A
    503112 6l4u:8 (2.4) BS16 KC1 N/A GO:0009765 ... N/A N/A
    503113 6l4u:8 (2.4) BS17 KC1 N/A GO:0009765 ... N/A N/A
    503114 6l4u:8 (2.4) BS18 KC1 N/A GO:0009765 ... N/A N/A
    503115 6l4u:8 (2.4) BS19 A86 N/A GO:0009765 ... N/A N/A
    503116 6l4u:8 (2.4) BS20 DD6 N/A GO:0009765 ... N/A N/A
    503117 6l4u:8 (2.4) BS21 DD6 N/A GO:0009765 ... N/A N/A
    503118 6l4u:8 (2.4) BS22 A86 N/A GO:0009765 ... N/A N/A
    503119 6l4u:8 (2.4) BS23 A86 N/A GO:0009765 ... N/A N/A
    503120 6l4u:8 (2.4) BS24 A86 N/A GO:0009765 ... N/A N/A
    503121 6l4u:8 (2.4) BS25 A86 N/A GO:0009765 ... N/A N/A
    503122 6l4u:9 (2.4) BS01 KC1 N/A GO:0009765 ... N/A N/A
    503123 6l4u:9 (2.4) BS02 CLA N/A GO:0009765 ... N/A N/A
    503124 6l4u:9 (2.4) BS03 KC1 N/A GO:0009765 ... N/A N/A
    503125 6l4u:9 (2.4) BS04 CLA N/A GO:0009765 ... N/A N/A
    503126 6l4u:9 (2.4) BS05 CLA N/A GO:0009765 ... N/A N/A
    503127 6l4u:9 (2.4) BS06 CLA N/A GO:0009765 ... N/A N/A
    503128 6l4u:9 (2.4) BS07 CLA N/A GO:0009765 ... N/A N/A
    503129 6l4u:9 (2.4) BS08 CLA N/A GO:0009765 ... N/A N/A
    503130 6l4u:9 (2.4) BS09 KC1 N/A GO:0009765 ... N/A N/A
    503131 6l4u:9 (2.4) BS10 KC1 N/A GO:0009765 ... N/A N/A
    503132 6l4u:9 (2.4) BS11 KC1 N/A GO:0009765 ... N/A N/A
    503133 6l4u:9 (2.4) BS12 A86 N/A GO:0009765 ... N/A N/A
    503134 6l4u:9 (2.4) BS13 DD6 N/A GO:0009765 ... N/A N/A
    503135 6l4u:9 (2.4) BS14 A86 N/A GO:0009765 ... N/A N/A
    503136 6l4u:A (2.4) BS01 CL0 N/A GO:0009579 ... N/A N/A
    503137 6l4u:A (2.4) BS02 CLA N/A GO:0009579 ... N/A N/A
    503138 6l4u:A (2.4) BS03 CLA N/A GO:0009579 ... N/A N/A
    503139 6l4u:A (2.4) BS04 CLA N/A GO:0009579 ... N/A N/A
    503140 6l4u:A (2.4) BS05 CLA N/A GO:0009579 ... N/A N/A
    503141 6l4u:A (2.4) BS06 CLA N/A GO:0009579 ... N/A N/A
    503142 6l4u:A (2.4) BS07 CLA N/A GO:0009579 ... N/A N/A
    503143 6l4u:A (2.4) BS08 CLA N/A GO:0009579 ... N/A N/A
    503144 6l4u:A (2.4) BS09 CLA N/A GO:0009579 ... N/A N/A
    503145 6l4u:A (2.4) BS10 CLA N/A GO:0009579 ... N/A N/A
    503146 6l4u:A (2.4) BS11 CLA N/A GO:0009579 ... N/A N/A
    503147 6l4u:A (2.4) BS12 CLA N/A GO:0009579 ... N/A N/A
    503148 6l4u:A (2.4) BS13 CLA N/A GO:0009579 ... N/A N/A
    503149 6l4u:A (2.4) BS14 CLA N/A GO:0009579 ... N/A N/A
    503150 6l4u:A (2.4) BS15 CLA N/A GO:0009579 ... N/A N/A
    503151 6l4u:A (2.4) BS16 CLA N/A GO:0009579 ... N/A N/A
    503152 6l4u:A (2.4) BS17 CLA N/A GO:0009579 ... N/A N/A
    503153 6l4u:A (2.4) BS18 CLA N/A GO:0009579 ... N/A N/A
    503154 6l4u:A (2.4) BS19 CLA N/A GO:0009579 ... N/A N/A
    503155 6l4u:A (2.4) BS20 CLA N/A GO:0009579 ... N/A N/A
    503156 6l4u:A (2.4) BS21 CLA N/A GO:0009579 ... N/A N/A
    503157 6l4u:A (2.4) BS22 CLA N/A GO:0009579 ... N/A N/A
    503158 6l4u:A (2.4) BS23 CLA N/A GO:0009579 ... N/A N/A
    503159 6l4u:A (2.4) BS24 CLA N/A GO:0009579 ... N/A N/A
    503160 6l4u:A (2.4) BS25 CLA N/A GO:0009579 ... N/A N/A
    503161 6l4u:A (2.4) BS26 CLA N/A GO:0009579 ... N/A N/A
    503162 6l4u:A (2.4) BS27 CLA N/A GO:0009579 ... N/A N/A
    503163 6l4u:A (2.4) BS28 CLA N/A GO:0009579 ... N/A N/A
    503164 6l4u:A (2.4) BS29 CLA N/A GO:0009579 ... N/A N/A
    503165 6l4u:A (2.4) BS30 CLA N/A GO:0009579 ... N/A N/A
    503166 6l4u:A (2.4) BS31 CLA N/A GO:0009579 ... N/A N/A
    503167 6l4u:A (2.4) BS32 CLA N/A GO:0009579 ... N/A N/A
    503168 6l4u:A (2.4) BS33 CLA N/A GO:0009579 ... N/A N/A
    503169 6l4u:A (2.4) BS34 CLA N/A GO:0009579 ... N/A N/A
    503170 6l4u:A (2.4) BS35 CLA N/A GO:0009579 ... N/A N/A
    503171 6l4u:A (2.4) BS36 CLA N/A GO:0009579 ... N/A N/A
    503172 6l4u:A (2.4) BS37 CLA N/A GO:0009579 ... N/A N/A
    503173 6l4u:A (2.4) BS38 CLA N/A GO:0009579 ... N/A N/A
    503174 6l4u:A (2.4) BS39 CLA N/A GO:0009579 ... N/A N/A
    503175 6l4u:A (2.4) BS40 CLA N/A GO:0009579 ... N/A N/A
    503176 6l4u:A (2.4) BS41 CLA N/A GO:0009579 ... N/A N/A
    503177 6l4u:A (2.4) BS42 CLA N/A GO:0009579 ... N/A N/A
    503178 6l4u:A (2.4) BS43 CLA N/A GO:0009579 ... N/A N/A
    503179 6l4u:A (2.4) BS44 CLA N/A GO:0009579 ... N/A N/A
    503180 6l4u:A (2.4) BS45 PQN N/A GO:0009579 ... N/A N/A
    503181 6l4u:A (2.4) BS46 SF4 N/A GO:0009579 ... N/A N/A
    503182 6l4u:A (2.4) BS47 CLA N/A GO:0009579 ... N/A N/A
    503183 6l4u:A (2.4) BS48 CLA N/A GO:0009579 ... N/A N/A
    503184 6l4u:A (2.4) BS49 CLA N/A GO:0009579 ... N/A N/A
    503185 6l4u:A (2.4) BS50 CLA N/A GO:0009579 ... N/A N/A
    503186 6l4u:A (2.4) BS51 CLA N/A GO:0009579 ... N/A N/A
    503187 6l4u:A (2.4) BS52 A86 N/A GO:0009579 ... N/A N/A
    503188 6l4u:A (2.4) BS53 CLA N/A GO:0009579 ... N/A N/A
    503189 6l4u:B (2.4) BS01 CL0 N/A GO:0009522 ... N/A N/A
    503190 6l4u:B (2.4) BS02 CLA N/A GO:0009522 ... N/A N/A
    503191 6l4u:B (2.4) BS03 CLA N/A GO:0009522 ... N/A N/A
    503192 6l4u:B (2.4) BS04 CLA N/A GO:0009522 ... N/A N/A
    503193 6l4u:B (2.4) BS05 CLA N/A GO:0009522 ... N/A N/A
    503194 6l4u:B (2.4) BS06 CLA N/A GO:0009522 ... N/A N/A
    503195 6l4u:B (2.4) BS07 SF4 N/A GO:0009522 ... N/A N/A
    503196 6l4u:B (2.4) BS08 CLA N/A GO:0009522 ... N/A N/A
    503197 6l4u:B (2.4) BS09 CLA N/A GO:0009522 ... N/A N/A
    503198 6l4u:B (2.4) BS10 CLA N/A GO:0009522 ... N/A N/A
    503199 6l4u:B (2.4) BS11 CLA N/A GO:0009522 ... N/A N/A
    503200 6l4u:B (2.4) BS12 CLA N/A GO:0009522 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).