SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    503601 6l88:B (3.0) BS01 E6R ? N/A P08235 31991486 BindingDB: IC50=>1000nM
    503602 6l88:C (3.0) BS01 E6R ? N/A P08235 31991486 BindingDB: IC50=>1000nM
    503603 6l88:D (3.0) BS01 E6R ? N/A P08235 31991486 BindingDB: IC50=>1000nM
    503604 6l89:A (2.1) BS01 E7C ? GO:0003677 ... P37231 32054125 MOAD: Ki=2.64uM
    503605 6l89:B (2.1) BS01 E7C ? GO:0003677 ... P37231 32054125 MOAD: Ki=2.64uM
    503606 6l8a:C (1.95005) BS01 BAL 3.12.1.- GO:0005886 ... B7J3C9 33103311
    503607 6l8a:E (1.95005) BS01 BAL 3.12.1.- GO:0005886 ... B7J3C9 33103311
    503608 6l8a:E (1.95005) BS02 BAL 3.12.1.- GO:0005886 ... B7J3C9 33103311
    503609 6l8a:E (1.95005) BS03 GLY 3.12.1.- GO:0005886 ... B7J3C9 33103311
    503610 6l8a:F (1.95005) BS01 GLY 3.12.1.- GO:0005886 ... B7J3C9 33103311
    503611 6l8e:A (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503612 6l8e:A (2.35) BS02 dna ? GO:0003700 ... Q2G285 32845304
    503613 6l8e:B (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503614 6l8e:B (2.35) BS02 dna ? GO:0003700 ... Q2G285 32845304
    503615 6l8e:C (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503616 6l8e:C (2.35) BS02 dna ? GO:0003700 ... Q2G285 32845304
    503617 6l8e:D (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503618 6l8e:I (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503619 6l8e:I (2.35) BS02 dna ? GO:0003700 ... Q2G285 32845304
    503620 6l8e:J (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503621 6l8e:K (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503622 6l8e:K (2.35) BS02 dna ? GO:0003700 ... Q2G285 32845304
    503623 6l8e:L (2.35) BS01 dna ? GO:0003700 ... Q2G285 32845304
    503624 6l8h:A (2.0) BS01 HEM 1.14.14.158 GO:0004497 ... Q6TBX7 32513704
    503625 6l8h:B (2.0) BS01 HEM 1.14.14.158 GO:0004497 ... Q6TBX7 32513704
    503626 6l8h:C (2.0) BS01 HEM 1.14.14.158 GO:0004497 ... Q6TBX7 32513704
    503627 6l8h:D (2.0) BS01 HEM 1.14.14.158 GO:0004497 ... Q6TBX7 32513704
    503628 6l8i:A (1.7) BS01 HEM 1.14.-.- GO:0004497 ... Q93VK5 32513704
    503629 6l8j:A (2.399) BS01 HEM 1.14.-.- GO:0004497 ... Q93VK5 32513704
    503630 6l8j:A (2.399) BS02 RET 1.14.-.- GO:0004497 ... Q93VK5 32513704
    503631 6l8k:A (2.999) BS01 UTP 2.7.7.52 N/A O64642 32008746
    503632 6l8l:A (2.888) BS01 1E8 2.7.10.2 GO:0004672 ... P00523 33359446
    503633 6l8l:B (2.888) BS01 1E8 2.7.10.2 GO:0004672 ... P00523 33359446
    503634 6l8l:C (2.888) BS01 1E8 2.7.10.2 GO:0004672 ... P00523 33359446
    503635 6l8l:D (2.888) BS01 1E8 2.7.10.2 GO:0004672 ... P00523 33359446
    503636 6l8n:A (3.6) BS01 ZN 3.6.4.- GO:0003676 ... Q6CJM4 33436623
    503637 6l8n:A (3.6) BS02 ZN 3.6.4.- GO:0003676 ... Q6CJM4 33436623
    503638 6l8s:A (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    503639 6l8s:A (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    503640 6l8s:A (1.58) BS03 O N/A GO:0016491 ... N/A 32380017
    503641 6l8s:A (1.58) BS04 O N/A GO:0016491 ... N/A 32380017
    503642 6l8s:B (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    503643 6l8s:B (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    503644 6l8s:B (1.58) BS03 O N/A GO:0016491 ... N/A 32380017
    503645 6l8s:B (1.58) BS04 O N/A GO:0016491 ... N/A 32380017
    503646 6l8s:B (1.58) BS05 MG N/A GO:0016491 ... N/A 32380017
    503647 6l8s:C (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    503648 6l8s:C (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    503649 6l8s:C (1.58) BS03 O N/A GO:0016491 ... N/A 32380017
    503650 6l8s:C (1.58) BS04 O N/A GO:0016491 ... N/A 32380017
    503651 6l8s:C (1.58) BS05 MG N/A GO:0016491 ... N/A 32380017
    503652 6l8s:C (1.58) BS06 MG N/A GO:0016491 ... N/A 32380017
    503653 6l8u:A (2.925) BS01 SAH 2.1.1.- GO:0001510 ... Q7Z5W3 31919512
    503654 6l8u:B (2.925) BS01 SAH 2.1.1.- GO:0001510 ... Q7Z5W3 31919512
    503655 6l8u:C (2.925) BS01 SAH 2.1.1.- GO:0001510 ... Q7Z5W3 31919512
    503656 6l8u:D (2.925) BS01 SAH 2.1.1.- GO:0001510 ... Q7Z5W3 31919512
    503657 6l8z:A (2.1) BS01 UPG 2.4.1.350 GO:0008194 ... K7NBW3 N/A
    503658 6l94:A (3.10012) BS01 FE2 1.14.11.-
    1.14.11.33
    1.14.11.51
    4.2.99.18
    GO:0000049 ... P0CB42 33068553
    503659 6l96:A (3.2) BS01 peptide ? GO:0003677 ... Q07869 31935812
    503660 6l96:A (3.2) BS02 P7F ? GO:0003677 ... Q07869 31935812 BindingDB: EC50=1nM
    503661 6l96:B (3.2) BS01 P7F ? GO:0003677 ... Q07869 31935812 BindingDB: EC50=1nM
    503662 6l97:A (2.362) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 31971182
    503663 6l97:B (2.362) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 31971182
    503664 6l99:A (-1.00) BS01 ZN 2.3.2.31 N/A P50876 N/A
    503665 6l99:A (-1.00) BS02 ZN 2.3.2.31 N/A P50876 N/A
    503666 6l9c:X (1.14) BS01 CU 1.4.3.21 GO:0005507 ... P46881 32371483
    503667 6l9f:A (2.555) BS01 peptide ? N/A Q62296 N/A
    503668 6l9f:B (2.555) BS01 peptide ? N/A Q62296 N/A
    503669 6l9h:A (2.6) BS01 dna ? GO:0000786 ... P68431 N/A
    503670 6l9h:A (2.6) BS02 dna ? GO:0000786 ... P68431 N/A
    503671 6l9h:B (2.6) BS01 dna ? GO:0003677 ... P62805 N/A
    503672 6l9h:B (2.6) BS02 dna ? GO:0003677 ... P62805 N/A
    503673 6l9h:C (2.6) BS01 dna ? GO:0000786 ... P04908 N/A
    503674 6l9h:C (2.6) BS02 dna ? GO:0000786 ... P04908 N/A
    503675 6l9h:D (2.6) BS01 dna ? GO:0000786 ... O60814 N/A
    503676 6l9h:D (2.6) BS02 dna ? GO:0000786 ... O60814 N/A
    503677 6l9h:E (2.6) BS01 dna ? GO:0000786 ... P68431 N/A
    503678 6l9h:E (2.6) BS02 dna ? GO:0000786 ... P68431 N/A
    503679 6l9h:F (2.6) BS01 dna ? GO:0003677 ... P62805 N/A
    503680 6l9h:F (2.6) BS02 dna ? GO:0003677 ... P62805 N/A
    503681 6l9h:G (2.6) BS01 dna ? GO:0000786 ... P04908 N/A
    503682 6l9h:G (2.6) BS02 dna ? GO:0000786 ... P04908 N/A
    503683 6l9h:H (2.6) BS01 dna ? GO:0000786 ... O60814 N/A
    503684 6l9h:H (2.6) BS02 dna ? GO:0000786 ... O60814 N/A
    503685 6l9i:A (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503686 6l9i:A (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503687 6l9i:B (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503688 6l9i:B (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503689 6l9i:C (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503690 6l9i:C (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503691 6l9i:D (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503692 6l9i:D (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503693 6l9i:E (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503694 6l9i:E (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503695 6l9i:F (2.79) BS01 MN N/A GO:0033609 ... N/A N/A
    503696 6l9i:F (2.79) BS02 MN N/A GO:0033609 ... N/A N/A
    503697 6l9k:A (1.8) BS01 peptide ? N/A P01897 34074778
    503698 6l9l:A (2.399) BS01 peptide ? N/A P01897 34074778
    503699 6l9l:C (2.399) BS01 peptide N/A N/A N/A 34074778
    503700 6l9l:D (2.399) BS01 peptide N/A N/A N/A 34074778
    503701 6l9l:E (2.399) BS01 peptide ? N/A P01897 34074778
    503702 6l9l:G (2.399) BS01 peptide N/A N/A N/A 34074778
    503703 6l9l:H (2.399) BS01 peptide N/A N/A N/A 34074778
    503704 6l9m:A (2.6) BS01 peptide ? N/A P01897 34074778
    503705 6l9m:D (2.6) BS01 peptide ? N/A P01897 34074778
    503706 6l9m:G (2.6) BS01 peptide ? N/A P01897 34074778
    503707 6l9m:J (2.6) BS01 peptide ? N/A P01897 34074778
    503708 6l9n:A (2.6) BS01 peptide ? N/A P01897 34074778
    503709 6l9n:D (2.6) BS01 peptide ? N/A P01897 34074778
    503710 6l9n:G (2.6) BS01 peptide ? N/A P01897 34074778
    503711 6l9n:J (2.6) BS01 peptide ? N/A P01897 34074778
    503712 6l9s:A (2.0) BS01 CU1 ? GO:0005507 ... A7NNM5 31933173
    503713 6l9t:A (1.89) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    503714 6l9t:A (1.89) BS02 ZN 1.11.1.7 GO:0004601 ... P80025 N/A
    503715 6l9t:A (1.89) BS03 HEM 1.11.1.7 GO:0004601 ... P80025 N/A
    503716 6l9t:A (1.89) BS04 OSM 1.11.1.7 GO:0004601 ... P80025 N/A
    503717 6l9z:A (2.5) BS01 dna ? GO:0000786 ... P68431 33590100
    503718 6l9z:A (2.5) BS02 dna ? GO:0000786 ... P68431 33590100
    503719 6l9z:B (2.5) BS01 dna ? GO:0000781 ... P62805 33590100
    503720 6l9z:B (2.5) BS02 dna ? GO:0000781 ... P62805 33590100
    503721 6l9z:C (2.5) BS01 dna ? GO:0000786 ... P04908 33590100
    503722 6l9z:C (2.5) BS02 dna ? GO:0000786 ... P04908 33590100
    503723 6l9z:D (2.5) BS01 dna ? GO:0000786 ... P06899 33590100
    503724 6l9z:D (2.5) BS02 dna ? GO:0000786 ... P06899 33590100
    503725 6l9z:E (2.5) BS01 dna ? GO:0000786 ... P68431 33590100
    503726 6l9z:E (2.5) BS02 dna ? GO:0000786 ... P68431 33590100
    503727 6l9z:F (2.5) BS01 dna ? GO:0000781 ... P62805 33590100
    503728 6l9z:F (2.5) BS02 dna ? GO:0000781 ... P62805 33590100
    503729 6l9z:G (2.5) BS01 dna ? GO:0000786 ... P04908 33590100
    503730 6l9z:G (2.5) BS02 dna ? GO:0000786 ... P04908 33590100
    503731 6l9z:H (2.5) BS01 dna ? GO:0000786 ... P06899 33590100
    503732 6l9z:H (2.5) BS02 dna ? GO:0000786 ... P06899 33590100
    503733 6l9z:K (2.5) BS01 dna ? GO:0000786 ... P68431 33590100
    503734 6l9z:K (2.5) BS02 dna ? GO:0000786 ... P68431 33590100
    503735 6l9z:L (2.5) BS01 dna ? GO:0000781 ... P62805 33590100
    503736 6l9z:L (2.5) BS02 dna ? GO:0000781 ... P62805 33590100
    503737 6l9z:M (2.5) BS01 dna ? GO:0000786 ... P04908 33590100
    503738 6l9z:M (2.5) BS02 dna ? GO:0000786 ... P04908 33590100
    503739 6l9z:N (2.5) BS01 dna ? GO:0000786 ... P06899 33590100
    503740 6l9z:N (2.5) BS02 dna ? GO:0000786 ... P06899 33590100
    503741 6l9z:N (2.5) BS03 CA ? GO:0000786 ... P06899 33590100
    503742 6l9z:O (2.5) BS01 dna ? GO:0000786 ... P68431 33590100
    503743 6l9z:O (2.5) BS02 dna ? GO:0000786 ... P68431 33590100
    503744 6l9z:P (2.5) BS01 dna ? GO:0000781 ... P62805 33590100
    503745 6l9z:P (2.5) BS02 dna ? GO:0000781 ... P62805 33590100
    503746 6l9z:Q (2.5) BS01 dna ? GO:0000786 ... P04908 33590100
    503747 6l9z:Q (2.5) BS02 dna ? GO:0000786 ... P04908 33590100
    503748 6l9z:R (2.5) BS01 dna ? GO:0000786 ... P06899 33590100
    503749 6l9z:R (2.5) BS02 dna ? GO:0000786 ... P06899 33590100
    503750 6l9z:S (2.5) BS01 dna ? GO:0000786 ... Q92522 33590100
    503751 6l9z:S (2.5) BS02 dna ? GO:0000786 ... Q92522 33590100
    503752 6la2:A (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503753 6la2:A (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503754 6la2:B (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503755 6la2:B (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503756 6la2:C (3.89) BS01 dna ? GO:0000786 ... P04908 33590100
    503757 6la2:C (3.89) BS02 dna ? GO:0000786 ... P04908 33590100
    503758 6la2:D (3.89) BS01 dna ? GO:0000786 ... P06899 33590100
    503759 6la2:D (3.89) BS02 dna ? GO:0000786 ... P06899 33590100
    503760 6la2:E (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503761 6la2:E (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503762 6la2:F (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503763 6la2:F (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503764 6la2:G (3.89) BS01 dna ? GO:0000786 ... P04908 33590100
    503765 6la2:G (3.89) BS02 dna ? GO:0000786 ... P04908 33590100
    503766 6la2:H (3.89) BS01 dna ? GO:0000786 ... P06899 33590100
    503767 6la2:H (3.89) BS02 dna ? GO:0000786 ... P06899 33590100
    503768 6la2:K (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503769 6la2:K (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503770 6la2:L (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503771 6la2:L (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503772 6la2:M (3.89) BS01 dna ? GO:0000786 ... P04908 33590100
    503773 6la2:M (3.89) BS02 dna ? GO:0000786 ... P04908 33590100
    503774 6la2:N (3.89) BS01 dna ? GO:0000786 ... P06899 33590100
    503775 6la2:N (3.89) BS02 dna ? GO:0000786 ... P06899 33590100
    503776 6la2:O (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503777 6la2:O (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503778 6la2:P (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503779 6la2:P (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503780 6la2:Q (3.89) BS01 dna ? GO:0000786 ... P04908 33590100
    503781 6la2:Q (3.89) BS02 dna ? GO:0000786 ... P04908 33590100
    503782 6la2:R (3.89) BS01 dna ? GO:0000786 ... P06899 33590100
    503783 6la2:R (3.89) BS02 dna ? GO:0000786 ... P06899 33590100
    503784 6la2:S (3.89) BS01 dna ? GO:0000785 ... P07305 33590100
    503785 6la2:S (3.89) BS02 dna ? GO:0000785 ... P07305 33590100
    503786 6la2:T (3.89) BS01 dna ? GO:0000785 ... P07305 33590100
    503787 6la2:T (3.89) BS02 dna ? GO:0000785 ... P07305 33590100
    503788 6la2:U (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503789 6la2:U (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503790 6la2:V (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503791 6la2:V (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503792 6la2:W (3.89) BS01 dna ? GO:0000786 ... P04908 33590100
    503793 6la2:W (3.89) BS02 dna ? GO:0000786 ... P04908 33590100
    503794 6la2:X (3.89) BS01 dna ? GO:0000786 ... P06899 33590100
    503795 6la2:X (3.89) BS02 dna ? GO:0000786 ... P06899 33590100
    503796 6la2:Y (3.89) BS01 dna ? GO:0000786 ... P68431 33590100
    503797 6la2:Y (3.89) BS02 dna ? GO:0000786 ... P68431 33590100
    503798 6la2:Z (3.89) BS01 dna ? GO:0000781 ... P62805 33590100
    503799 6la2:Z (3.89) BS02 dna ? GO:0000781 ... P62805 33590100
    503800 6la2:a (3.89) BS01 dna ? GO:0000786 ... P04908 33590100

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).