SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    505001 6lmj:A (2.8) BS01 dna ? GO:0003677 ... P68742 32358196
    505002 6lmj:B (2.8) BS01 dna ? GO:0003677 ... P68742 32358196
    505003 6lmj:B (2.8) BS02 dna ? GO:0003677 ... P68742 32358196
    505004 6lmk:R (3.7) BS01 peptide ? GO:0004888 ... P47871 32193322
    505005 6lml:R (3.9) BS01 peptide ? GO:0004888 ... P47871 32193322
    505006 6lmq:A (2.1) BS01 940 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 32773094
    505007 6lmr:A (-1.00) BS01 dna ? GO:0003676 ... P67809 32710623
    505008 6lmt:A (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505009 6lmt:A (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505010 6lmt:A (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505011 6lmt:A (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505012 6lmt:A (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505013 6lmt:B (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505014 6lmt:B (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505015 6lmt:B (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505016 6lmt:B (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505017 6lmt:B (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505018 6lmt:C (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505019 6lmt:C (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505020 6lmt:C (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505021 6lmt:C (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505022 6lmt:C (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505023 6lmt:D (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505024 6lmt:D (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505025 6lmt:D (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505026 6lmt:D (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505027 6lmt:D (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505028 6lmt:E (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505029 6lmt:E (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505030 6lmt:E (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505031 6lmt:E (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505032 6lmt:E (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505033 6lmt:F (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505034 6lmt:F (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505035 6lmt:F (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505036 6lmt:F (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505037 6lmt:F (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505038 6lmt:G (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505039 6lmt:G (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505040 6lmt:G (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505041 6lmt:G (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505042 6lmt:G (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505043 6lmt:H (2.66) BS01 Y01 ? N/A H2MCM1 32832629
    505044 6lmt:H (2.66) BS02 Y01 ? N/A H2MCM1 32832629
    505045 6lmt:H (2.66) BS03 Y01 ? N/A H2MCM1 32832629
    505046 6lmt:H (2.66) BS04 Y01 ? N/A H2MCM1 32832629
    505047 6lmt:H (2.66) BS05 Y01 ? N/A H2MCM1 32832629
    505048 6ln0:A (2.455) BS01 ZN 2.1.1.57
    3.4.19.12
    3.6.4.12
    3.6.4.13
    GO:0006508 ... A0A222YV61 33327866
    505049 6ln1:A (2.699) BS01 EKU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34323401
    505050 6ln1:B (2.699) BS01 EKU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 34323401
    505051 6ln2:A (3.2) BS01 97Y ? GO:0004888 ... P00268
    P43220
    32152292
    505052 6ln3:A (2.0) BS01 AMP 2.7.4.3 GO:0004017 ... Q9YDD2 32271910
    505053 6ln3:A (2.0) BS02 ATP 2.7.4.3 GO:0004017 ... Q9YDD2 32271910
    505054 6ln4:A (2.61) BS01 peptide ? N/A O95718 32795533
    505055 6ln5:A (2.8) BS01 ACP 7.2.2.10 GO:0000045 ... P16615 32851169
    505056 6ln5:A (2.8) BS02 MG 7.2.2.10 GO:0000045 ... P16615 32851169
    505057 6ln5:A (2.8) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505058 6ln5:A (2.8) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505059 6ln6:A (2.9) BS01 ACP 7.2.2.10 GO:0000045 ... P16615 32851169
    505060 6ln6:A (2.9) BS02 MG 7.2.2.10 GO:0000045 ... P16615 32851169
    505061 6ln6:A (2.9) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505062 6ln6:A (2.9) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505063 6ln7:A (2.8) BS01 ACP 7.2.2.10 GO:0000045 ... P16615 32851169
    505064 6ln7:A (2.8) BS02 MG 7.2.2.10 GO:0000045 ... P16615 32851169
    505065 6ln7:A (2.8) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505066 6ln7:A (2.8) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    505067 6ln8:A (3.1) BS01 BEF 7.2.2.10 GO:0000045 ... P16615 32851169
    505068 6ln8:A (3.1) BS02 MG 7.2.2.10 GO:0000045 ... P16615 32851169
    505069 6ln9:A (3.4) BS01 BEF 7.2.2.10 GO:0000045 ... P16615 32851169
    505070 6ln9:A (3.4) BS02 MG 7.2.2.10 GO:0000045 ... P16615 32851169
    505071 6lna:A (1.701) BS01 MN 2.7.7.108 GO:0000287 ... P77649 32966796
    505072 6lna:A (1.701) BS02 ANP 2.7.7.108 GO:0000287 ... P77649 32966796
    505073 6lna:B (1.701) BS01 MN 2.7.7.108 GO:0000287 ... P77649 32966796
    505074 6lna:B (1.701) BS02 ANP 2.7.7.108 GO:0000287 ... P77649 32966796
    505075 6lnb:A (3.18) BS01 rna N/A GO:0004519 ... N/A 31913359
    505076 6lnb:B (3.18) BS01 rna N/A N/A N/A 31913359
    505077 6lnb:C (3.18) BS01 rna N/A N/A N/A 31913359
    505078 6lnb:C (3.18) BS02 dna N/A N/A N/A 31913359
    505079 6lnb:D (3.18) BS01 rna N/A N/A N/A 31913359
    505080 6lnb:D (3.18) BS02 dna N/A N/A N/A 31913359
    505081 6lnb:E (3.18) BS01 rna N/A N/A N/A 31913359
    505082 6lnb:E (3.18) BS02 dna N/A N/A N/A 31913359
    505083 6lnb:F (3.18) BS01 rna N/A N/A N/A 31913359
    505084 6lnb:F (3.18) BS02 dna N/A N/A N/A 31913359
    505085 6lnb:G (3.18) BS01 rna N/A N/A N/A 31913359
    505086 6lnb:G (3.18) BS02 dna N/A N/A N/A 31913359
    505087 6lnb:H (3.18) BS01 rna N/A N/A N/A 31913359
    505088 6lnb:H (3.18) BS02 dna N/A N/A N/A 31913359
    505089 6lnb:H (3.18) BS03 dna N/A N/A N/A 31913359
    505090 6lnc:A (3.21) BS01 rna N/A GO:0004519 ... N/A 31913359
    505091 6lnc:B (3.21) BS01 rna N/A N/A N/A 31913359
    505092 6lnc:C (3.21) BS01 rna N/A N/A N/A 31913359
    505093 6lnc:D (3.21) BS01 rna N/A N/A N/A 31913359
    505094 6lnc:E (3.21) BS01 rna N/A N/A N/A 31913359
    505095 6lnc:F (3.21) BS01 rna N/A N/A N/A 31913359
    505096 6lnc:G (3.21) BS01 rna N/A N/A N/A 31913359
    505097 6lnc:H (3.21) BS01 rna N/A N/A N/A 31913359
    505098 6lnd:K (2.001) BS01 ZN N/A N/A N/A 31913359
    505099 6lnd:K (2.001) BS02 ZN N/A N/A N/A 31913359
    505100 6lnh:A (2.34) BS01 FE 1.14.11.45 GO:0008198 ... E2GIN1 N/A
    505101 6lnh:B (2.34) BS01 FE 1.14.11.45 GO:0008198 ... E2GIN1 N/A
    505102 6lnh:C (2.34) BS01 FE 1.14.11.45 GO:0008198 ... E2GIN1 N/A
    505103 6lnh:D (2.34) BS01 FE 1.14.11.45 GO:0008198 ... E2GIN1 N/A
    505104 6lnk:A (2.639) BS01 ZN 4.1.2.13 GO:0004332 ... Q9URB4 N/A
    505105 6lnk:B (2.639) BS01 ZN 4.1.2.13 GO:0004332 ... Q9URB4 N/A
    505106 6lnn:D (2.634) BS01 EJC ? GO:0003723 ... K9N4V7 35517857
    505107 6lnq:A (2.244) BS01 EJF 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X7 32391184
    505108 6lnr:A (1.66) BS01 MG N/A GO:0004568 ... N/A 32750481
    505109 6lny:A (2.245) BS01 EOC 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0C6U8 32391184
    505110 6lo0:A (1.939) BS01 EOF 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0C6U8 32391184
    505111 6lo2:A (2.21) BS01 peptide ? N/A O75530 N/A
    505112 6lo2:A (2.21) BS02 EJU ? N/A O75530 N/A
    505113 6lo2:B (2.21) BS01 peptide ? N/A O75530 N/A
    505114 6lo2:B (2.21) BS02 EJU ? N/A O75530 N/A
    505115 6lo9:A (1.86005) BS01 ENU ? GO:0003677 ... P51449 N/A
    505116 6loa:A (2.50003) BS01 ENR ? GO:0003677 ... P51449 N/A
    505117 6lob:A (2.40007) BS01 EO0 ? GO:0003677 ... P51449 N/A BindingDB: IC50=167nM
    505118 6loc:A (2.20015) BS01 EKL ? GO:0003677 ... P51449 N/A
    505119 6lod:A (3.2) BS01 HEC ? GO:0016020 ... A7NJ87 32832681
    505120 6lod:A (3.2) BS02 HEC ? GO:0016020 ... A7NJ87 32832681
    505121 6lod:A (3.2) BS03 HEC ? GO:0016020 ... A7NJ87 32832681
    505122 6lod:A (3.2) BS04 HEC ? GO:0016020 ... A7NJ87 32832681
    505123 6lod:A (3.2) BS05 HEC ? GO:0016020 ... A7NJ87 32832681
    505124 6lod:A (3.2) BS06 EL6 ? GO:0016020 ... A7NJ87 32832681
    505125 6lod:B (3.2) BS01 HEC ? GO:0016491 ... A7NJ88 32832681
    505126 6lod:B (3.2) BS02 HEC ? GO:0016491 ... A7NJ88 32832681
    505127 6lod:B (3.2) BS03 SF4 ? GO:0016491 ... A7NJ88 32832681
    505128 6lod:B (3.2) BS04 SF4 ? GO:0016491 ... A7NJ88 32832681
    505129 6lod:B (3.2) BS05 SF4 ? GO:0016491 ... A7NJ88 32832681
    505130 6lod:B (3.2) BS06 F3S ? GO:0016491 ... A7NJ88 32832681
    505131 6lod:C (3.2) BS01 HEC ? GO:0005886 ... A7NJ89 32832681
    505132 6lod:C (3.2) BS02 EL6 ? GO:0005886 ... A7NJ89 32832681
    505133 6lod:C (3.2) BS03 EL6 ? GO:0005886 ... A7NJ89 32832681
    505134 6lod:E (3.2) BS01 HEC ? GO:0009055 ... A7NJ91 32832681
    505135 6lod:E (3.2) BS02 HEC ? GO:0009055 ... A7NJ91 32832681
    505136 6loe:A (3.5) BS01 HEC ? GO:0016020 ... A7NJ87 32832681
    505137 6loe:A (3.5) BS02 HEC ? GO:0016020 ... A7NJ87 32832681
    505138 6loe:A (3.5) BS03 HEC ? GO:0016020 ... A7NJ87 32832681
    505139 6loe:A (3.5) BS04 HEC ? GO:0016020 ... A7NJ87 32832681
    505140 6loe:A (3.5) BS05 HEC ? GO:0016020 ... A7NJ87 32832681
    505141 6loe:A (3.5) BS06 EL6 ? GO:0016020 ... A7NJ87 32832681
    505142 6loe:B (3.5) BS01 HEC ? GO:0016491 ... A7NJ88 32832681
    505143 6loe:B (3.5) BS02 HEC ? GO:0016491 ... A7NJ88 32832681
    505144 6loe:B (3.5) BS03 SF4 ? GO:0016491 ... A7NJ88 32832681
    505145 6loe:B (3.5) BS04 SF4 ? GO:0016491 ... A7NJ88 32832681
    505146 6loe:B (3.5) BS05 SF4 ? GO:0016491 ... A7NJ88 32832681
    505147 6loe:B (3.5) BS06 F3S ? GO:0016491 ... A7NJ88 32832681
    505148 6loe:C (3.5) BS01 HEC ? GO:0005886 ... A7NJ89 32832681
    505149 6loe:C (3.5) BS02 EL6 ? GO:0005886 ... A7NJ89 32832681
    505150 6loe:D (3.5) BS01 HEC ? GO:0016020 ... A7NJ90 32832681
    505151 6loe:E (3.5) BS01 HEC ? GO:0009055 ... A7NJ91 32832681
    505152 6loe:E (3.5) BS02 HEC ? GO:0009055 ... A7NJ91 32832681
    505153 6loj:B (3.72) BS01 GDP 3.6.1.-
    3.6.5.-
    GO:0000139 ... P32455 33303953
    505154 6lon:A (2.2) BS01 LLQ 4.4.1.41 GO:0003824 ... E5Y7I4 32571930 MOAD: Kd=6.7uM
    505155 6lon:B (2.2) BS01 LLQ 4.4.1.41 GO:0003824 ... E5Y7I4 32571930 MOAD: Kd=6.7uM
    505156 6lon:C (2.2) BS01 LLQ 4.4.1.41 GO:0003824 ... E5Y7I4 32571930 MOAD: Kd=6.7uM
    505157 6lon:D (2.2) BS01 LLQ 4.4.1.41 GO:0003824 ... E5Y7I4 32571930 MOAD: Kd=6.7uM
    505158 6loo:A (1.99) BS01 ELR ? N/A A0A094YZ24 32227910
    505159 6loo:A (1.99) BS02 ELU ? N/A A0A094YZ24 32227910
    505160 6loo:B (1.99) BS01 ELR ? N/A A0A094YZ24 32227910
    505161 6lop:A (1.91) BS01 ELX ? N/A A0A094YZ24 32227910
    505162 6lop:B (1.91) BS01 ELX ? N/A A0A094YZ24 32227910
    505163 6loq:A (1.331) BS01 CMP 3.2.2.22 GO:0017148 ... P16094 32653369
    505164 6lor:A (1.35) BS01 ADP 3.2.2.22 GO:0017148 ... P16094 32653369
    505165 6los:A (2.476) BS01 peptide ? GO:0001822 ... P97298 32385162
    505166 6los:A (2.476) BS02 peptide ? GO:0001822 ... P97298 32385162
    505167 6lov:A (1.35) BS01 4UO 3.2.2.22 GO:0017148 ... P16094 32653369
    505168 6low:A (1.39) BS01 5GP 3.2.2.22 GO:0017148 ... P16094 32653369
    505169 6lox:A (3.2) BS01 EN3 3.5.1.2 GO:0004359 ... O94925 33792311
    505170 6lox:B (3.2) BS01 EN3 3.5.1.2 GO:0004359 ... O94925 33792311
    505171 6lox:C (3.2) BS01 EN3 3.5.1.2 GO:0004359 ... O94925 33792311
    505172 6lox:D (3.2) BS01 EN3 3.5.1.2 GO:0004359 ... O94925 33792311
    505173 6loy:A (1.35) BS01 D5M 3.2.2.22 GO:0017148 ... P16094 32653369
    505174 6loz:A (1.08) BS01 ADE 3.2.2.22 GO:0017148 ... P16094 32653369
    505175 6lp0:A (1.519) BS01 AMP 3.2.2.22 GO:0017148 ... P16094 32653369
    505176 6lp1:A (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    505177 6lp1:B (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    505178 6lp1:C (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    505179 6lp1:D (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    505180 6lp5:A (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505181 6lp5:A (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505182 6lp5:B (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505183 6lp5:B (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505184 6lp5:C (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505185 6lp5:C (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505186 6lp5:D (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505187 6lp5:D (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505188 6lp5:E (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505189 6lp5:E (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505190 6lp5:F (1.98) BS01 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505191 6lp5:F (1.98) BS02 FE 1.16.3.1 GO:0004322 ... D2JIV0 31983429
    505192 6lp6:A (1.795) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 32496056
    505193 6lp6:A (1.795) BS02 B6U 1.3.5.2 GO:0004151 ... Q02127 32496056 MOAD: ic50=1.2nM
    BindingDB: IC50=1.2nM
    505194 6lp7:A (1.802) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 32496056
    505195 6lp7:A (1.802) BS02 B6R 1.3.5.2 GO:0004151 ... Q02127 32496056 MOAD: ic50=9nM
    BindingDB: IC50=9.0nM
    505196 6lp8:A (1.79) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 32496056
    505197 6lp8:A (1.79) BS02 B6O 1.3.5.2 GO:0004151 ... Q02127 32496056 MOAD: ic50=0.5nM
    BindingDB: IC50=0.500000nM
    505198 6lpb:R (3.9) BS01 peptide ? GO:0004888 ... P41586 32157248
    505199 6lpd:A (1.65) BS01 FE2 N/A GO:0006826 ... N/A 33448656
    505200 6lpd:A (1.65) BS02 FE2 N/A GO:0006826 ... N/A 33448656

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).