SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    508001 6m32:a (2.7) BS21 CA ? GO:0009579 ... Q8KAY0 33214250
    508002 6m34:A (2.9) BS01 MPG 2.5.1.42 GO:0000287 ... Q57727 N/A
    508003 6m34:A (2.9) BS02 DMA 2.5.1.42 GO:0000287 ... Q57727 N/A
    508004 6m34:A (2.9) BS03 DMA 2.5.1.42 GO:0000287 ... Q57727 N/A
    508005 6m34:B (2.9) BS01 MPG 2.5.1.42 GO:0000287 ... Q57727 N/A
    508006 6m35:A (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508007 6m35:B (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508008 6m35:C (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508009 6m35:D (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508010 6m35:E (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508011 6m35:F (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508012 6m35:G (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508013 6m35:H (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508014 6m38:A (3.001) BS01 29E ? GO:0016020 ... Q7K4Y6 33850134
    508015 6m38:A (3.001) BS02 DMU ? GO:0016020 ... Q7K4Y6 33850134
    508016 6m38:A (3.001) BS03 CLR ? GO:0016020 ... Q7K4Y6 33850134
    508017 6m3d:C (1.6) BS01 dna ? GO:0000981 ... P02836 32876058
    508018 6m3d:C (1.6) BS02 dna ? GO:0000981 ... P02836 32876058
    508019 6m3f:B (1.96) BS01 MG 3.1.30.- GO:0003676 ... O08600 32192768
    508020 6m3i:B (1.98) BS01 UNU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 33589610 BindingDB: IC50=20000nM
    508021 6m3l:A (2.75) BS01 dna ? N/A G8ZFZ3 32232412
    508022 6m3s:A (2.3) BS01 NAD 1.1.1.41 GO:0000166 ... A0A0H2XBX7 N/A
    508023 6m3s:A (2.3) BS02 ICA 1.1.1.41 GO:0000166 ... A0A0H2XBX7 N/A
    508024 6m3s:B (2.3) BS01 NAD 1.1.1.41 GO:0000166 ... A0A0H2XBX7 N/A
    508025 6m3s:B (2.3) BS02 ICA 1.1.1.41 GO:0000166 ... A0A0H2XBX7 N/A
    508026 6m3t:A (2.38) BS01 MG 3.1.30.- GO:0003676 ... O08600 32192768
    508027 6m3t:B (2.38) BS01 MG 3.1.30.- GO:0003676 ... O08600 32192768
    508028 6m3v:A (4.6) BS01 dna ? GO:0000786 ... P68431 32958761
    508029 6m3v:A (4.6) BS02 dna ? GO:0000786 ... P68431 32958761
    508030 6m3v:B (4.6) BS01 dna ? GO:0000781 ... P62805 32958761
    508031 6m3v:B (4.6) BS02 dna ? GO:0000781 ... P62805 32958761
    508032 6m3v:C (4.6) BS01 dna ? GO:0000786 ... P04908 32958761
    508033 6m3v:C (4.6) BS02 dna ? GO:0000786 ... P04908 32958761
    508034 6m3v:D (4.6) BS01 dna ? GO:0000786 ... P06899 32958761
    508035 6m3v:D (4.6) BS02 dna ? GO:0000786 ... P06899 32958761
    508036 6m3v:E (4.6) BS01 dna ? GO:0000786 ... P68431 32958761
    508037 6m3v:E (4.6) BS02 dna ? GO:0000786 ... P68431 32958761
    508038 6m3v:F (4.6) BS01 dna ? GO:0000781 ... P62805 32958761
    508039 6m3v:F (4.6) BS02 dna ? GO:0000781 ... P62805 32958761
    508040 6m3v:G (4.6) BS01 dna ? GO:0000786 ... P04908 32958761
    508041 6m3v:G (4.6) BS02 dna ? GO:0000786 ... P04908 32958761
    508042 6m3v:H (4.6) BS01 dna ? GO:0000786 ... P06899 32958761
    508043 6m3v:H (4.6) BS02 dna ? GO:0000786 ... P06899 32958761
    508044 6m3v:K (4.6) BS01 dna ? GO:0000786 ... P68431 32958761
    508045 6m3v:K (4.6) BS02 dna ? GO:0000786 ... P68431 32958761
    508046 6m3v:L (4.6) BS01 dna ? GO:0000781 ... P62805 32958761
    508047 6m3v:L (4.6) BS02 dna ? GO:0000781 ... P62805 32958761
    508048 6m3v:M (4.6) BS01 dna ? GO:0000786 ... P04908 32958761
    508049 6m3v:M (4.6) BS02 dna ? GO:0000786 ... P04908 32958761
    508050 6m3v:N (4.6) BS01 dna ? GO:0000786 ... P06899 32958761
    508051 6m3v:N (4.6) BS02 dna ? GO:0000786 ... P06899 32958761
    508052 6m3v:O (4.6) BS01 dna ? GO:0000786 ... P68431 32958761
    508053 6m3v:O (4.6) BS02 dna ? GO:0000786 ... P68431 32958761
    508054 6m3v:P (4.6) BS01 dna ? GO:0000781 ... P62805 32958761
    508055 6m3v:P (4.6) BS02 dna ? GO:0000781 ... P62805 32958761
    508056 6m3v:Q (4.6) BS01 dna ? GO:0000786 ... P04908 32958761
    508057 6m3v:Q (4.6) BS02 dna ? GO:0000786 ... P04908 32958761
    508058 6m3v:R (4.6) BS01 dna ? GO:0000786 ... P06899 32958761
    508059 6m3v:R (4.6) BS02 dna ? GO:0000786 ... P06899 32958761
    508060 6m3x:A (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508061 6m3x:B (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508062 6m3x:C (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508063 6m3x:D (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508064 6m3x:E (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508065 6m3x:F (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508066 6m3x:G (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508067 6m3x:H (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508068 6m3x:I (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508069 6m3x:J (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508070 6m3x:K (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508071 6m3x:L (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508072 6m3x:M (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508073 6m3x:N (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508074 6m3x:O (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508075 6m3x:P (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508076 6m3x:Q (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508077 6m3x:R (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508078 6m3x:S (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508079 6m3x:T (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508080 6m3x:U (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508081 6m3x:V (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508082 6m3x:W (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508083 6m3x:X (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    508084 6m3y:A (1.93) BS01 MG N/A N/A N/A 32653644
    508085 6m3z:A (3.11) BS01 GLC ? GO:0016020 ... Q7K4Y6 33850134
    508086 6m3z:A (3.11) BS02 F0F ? GO:0016020 ... Q7K4Y6 33850134
    508087 6m3z:A (3.11) BS03 CLR ? GO:0016020 ... Q7K4Y6 33850134
    508088 6m44:A (3.81) BS01 dna ? GO:0000786 ... P68431 32958761
    508089 6m44:A (3.81) BS02 dna ? GO:0000786 ... P68431 32958761
    508090 6m44:B (3.81) BS01 dna ? GO:0000781 ... P62805 32958761
    508091 6m44:B (3.81) BS02 dna ? GO:0000781 ... P62805 32958761
    508092 6m44:C (3.81) BS01 dna ? GO:0000786 ... P04908 32958761
    508093 6m44:C (3.81) BS02 dna ? GO:0000786 ... P04908 32958761
    508094 6m44:D (3.81) BS01 dna ? GO:0000786 ... P06899 32958761
    508095 6m44:D (3.81) BS02 dna ? GO:0000786 ... P06899 32958761
    508096 6m44:E (3.81) BS01 dna ? GO:0000786 ... P68431 32958761
    508097 6m44:E (3.81) BS02 dna ? GO:0000786 ... P68431 32958761
    508098 6m44:F (3.81) BS01 dna ? GO:0000781 ... P62805 32958761
    508099 6m44:F (3.81) BS02 dna ? GO:0000781 ... P62805 32958761
    508100 6m44:G (3.81) BS01 dna ? GO:0000786 ... P04908 32958761
    508101 6m44:G (3.81) BS02 dna ? GO:0000786 ... P04908 32958761
    508102 6m44:H (3.81) BS01 dna ? GO:0000786 ... P06899 32958761
    508103 6m44:H (3.81) BS02 dna ? GO:0000786 ... P06899 32958761
    508104 6m44:K (3.81) BS01 dna ? GO:0000786 ... P68431 32958761
    508105 6m44:K (3.81) BS02 dna ? GO:0000786 ... P68431 32958761
    508106 6m44:L (3.81) BS01 dna ? GO:0000781 ... P62805 32958761
    508107 6m44:L (3.81) BS02 dna ? GO:0000781 ... P62805 32958761
    508108 6m44:M (3.81) BS01 dna ? GO:0000786 ... P04908 32958761
    508109 6m44:M (3.81) BS02 dna ? GO:0000786 ... P04908 32958761
    508110 6m44:N (3.81) BS01 dna ? GO:0000786 ... P06899 32958761
    508111 6m44:N (3.81) BS02 dna ? GO:0000786 ... P06899 32958761
    508112 6m44:O (3.81) BS01 dna ? GO:0000786 ... P68431 32958761
    508113 6m44:O (3.81) BS02 dna ? GO:0000786 ... P68431 32958761
    508114 6m44:P (3.81) BS01 dna ? GO:0000781 ... P62805 32958761
    508115 6m44:P (3.81) BS02 dna ? GO:0000781 ... P62805 32958761
    508116 6m44:Q (3.81) BS01 dna ? GO:0000786 ... P04908 32958761
    508117 6m44:Q (3.81) BS02 dna ? GO:0000786 ... P04908 32958761
    508118 6m44:R (3.81) BS01 dna ? GO:0000786 ... P06899 32958761
    508119 6m44:R (3.81) BS02 dna ? GO:0000786 ... P06899 32958761
    508120 6m47:A (3.252) BS01 GLC ? GO:0016020 ... Q7K4Y6 33850134
    508121 6m47:A (3.252) BS02 Y01 ? GO:0016020 ... Q7K4Y6 33850134
    508122 6m47:A (3.252) BS03 F1U ? GO:0016020 ... Q7K4Y6 33850134
    508123 6m48:A (2.5) BS01 MG N/A N/A N/A 32653644
    508124 6m48:B (2.5) BS01 MG N/A N/A N/A 32653644
    508125 6m49:A (3.7) BS01 HC3 ? GO:0005515 ... Q9Y5U4 33446483
    508126 6m4d:A (4.4) BS01 dna ? GO:0000786 ... P68431 33073403
    508127 6m4d:A (4.4) BS02 dna ? GO:0000786 ... P68431 33073403
    508128 6m4d:B (4.4) BS01 dna ? GO:0000781 ... P62805 33073403
    508129 6m4d:B (4.4) BS02 dna ? GO:0000781 ... P62805 33073403
    508130 6m4d:C (4.4) BS01 dna ? GO:0000786 ... Q71UI9 33073403
    508131 6m4d:C (4.4) BS02 dna ? GO:0000786 ... Q71UI9 33073403
    508132 6m4d:D (4.4) BS01 dna ? GO:0000786 ... Q16778 33073403
    508133 6m4d:D (4.4) BS02 dna ? GO:0000786 ... Q16778 33073403
    508134 6m4d:E (4.4) BS01 dna ? GO:0000786 ... P68431 33073403
    508135 6m4d:E (4.4) BS02 dna ? GO:0000786 ... P68431 33073403
    508136 6m4d:F (4.4) BS01 dna ? GO:0000781 ... P62805 33073403
    508137 6m4d:F (4.4) BS02 dna ? GO:0000781 ... P62805 33073403
    508138 6m4d:G (4.4) BS01 dna ? GO:0000786 ... Q71UI9 33073403
    508139 6m4d:G (4.4) BS02 dna ? GO:0000786 ... Q71UI9 33073403
    508140 6m4d:H (4.4) BS01 dna ? GO:0000786 ... Q16778 33073403
    508141 6m4e:A (2.1) BS01 MAN ? GO:0004553 ... Q564N5 32713015
    508142 6m4e:A (2.1) BS02 MAN ? GO:0004553 ... Q564N5 32713015
    508143 6m4f:C (2.2) BS01 MAN ? GO:0004553 ... Q564N5 32713015
    508144 6m4f:C (2.2) BS02 MAN ? GO:0004553 ... Q564N5 32713015
    508145 6m4f:E (2.2) BS01 MAN ? GO:0004553 ... Q564N5 32713015
    508146 6m4g:A (2.8) BS01 dna ? GO:0000786 ... P68431 33073403
    508147 6m4g:A (2.8) BS02 dna ? GO:0000786 ... P68431 33073403
    508148 6m4g:B (2.8) BS01 dna ? GO:0000781 ... P62805 33073403
    508149 6m4g:B (2.8) BS02 dna ? GO:0000781 ... P62805 33073403
    508150 6m4g:C (2.8) BS01 dna ? GO:0000786 ... P0C5Z0 33073403
    508151 6m4g:C (2.8) BS02 dna ? GO:0000786 ... P0C5Z0 33073403
    508152 6m4g:E (2.8) BS01 dna ? GO:0000786 ... P68431 33073403
    508153 6m4g:E (2.8) BS02 dna ? GO:0000786 ... P68431 33073403
    508154 6m4g:F (2.8) BS01 dna ? GO:0000781 ... P62805 33073403
    508155 6m4g:F (2.8) BS02 dna ? GO:0000781 ... P62805 33073403
    508156 6m4g:G (2.8) BS01 dna ? GO:0000786 ... P0C5Z0 33073403
    508157 6m4g:H (2.8) BS01 dna ? GO:0000786 ... Q16778 33073403
    508158 6m4h:A (3.9) BS01 dna ? GO:0000786 ... P68431 33073403
    508159 6m4h:A (3.9) BS02 dna ? GO:0000786 ... P68431 33073403
    508160 6m4h:B (3.9) BS01 dna ? GO:0000781 ... P62805 33073403
    508161 6m4h:B (3.9) BS02 dna ? GO:0000781 ... P62805 33073403
    508162 6m4h:C (3.9) BS01 dna ? GO:0000786 ... P0C5Z0 33073403
    508163 6m4h:C (3.9) BS02 dna ? GO:0000786 ... P0C5Z0 33073403
    508164 6m4h:D (3.9) BS01 dna ? GO:0000786 ... Q16778 33073403
    508165 6m4h:E (3.9) BS01 dna ? GO:0000786 ... P68431 33073403
    508166 6m4h:E (3.9) BS02 dna ? GO:0000786 ... P68431 33073403
    508167 6m4h:F (3.9) BS01 dna ? GO:0000781 ... P62805 33073403
    508168 6m4h:F (3.9) BS02 dna ? GO:0000781 ... P62805 33073403
    508169 6m4h:G (3.9) BS01 dna ? GO:0000786 ... P0C5Z0 33073403
    508170 6m4h:G (3.9) BS02 dna ? GO:0000786 ... P0C5Z0 33073403
    508171 6m4h:H (3.9) BS01 dna ? GO:0000786 ... Q16778 33073403
    508172 6m4i:A (1.9) BS01 ADP ? GO:0003777 ... Q02224 N/A
    508173 6m4i:B (1.9) BS01 ADP ? GO:0003777 ... Q02224 N/A
    508174 6m4j:A (1.8) BS01 PLP N/A N/A N/A 32345643
    508175 6m4j:A (1.8) BS02 CYS N/A N/A N/A 32345643
    508176 6m4j:B (1.8) BS01 PLP N/A N/A N/A 32345643
    508177 6m4j:B (1.8) BS02 CYS N/A N/A N/A 32345643
    508178 6m4k:A (1.3) BS01 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508179 6m4l:A (1.6) BS01 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508180 6m4m:A (1.7) BS01 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508181 6m4m:A (1.7) BS02 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508182 6m4m:A (1.7) BS03 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508183 6m4m:A (1.7) BS04 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508184 6m4m:A (1.7) BS05 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508185 6m4m:A (1.7) BS06 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508186 6m4m:A (1.7) BS07 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508187 6m4m:A (1.7) BS08 GLC 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508188 6m4m:A (1.7) BS09 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    508189 6m4n:A (3.8) BS01 PLP 2.3.1.50 GO:0004758 ... O15269 33558762
    508190 6m4n:B (3.8) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 33558762
    508191 6m4n:E (3.8) BS01 PLP 2.3.1.50 GO:0004758 ... O15269 33558762
    508192 6m4n:F (3.8) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 33558762
    508193 6m4o:A (3.4) BS01 peptide ? GO:0002903 ... Q8N138 33558762
    508194 6m4o:T (3.4) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 33558762
    508195 6m4p:A (2.3) BS01 HEM ? GO:0004497 ... A0A286SBY7 32908132
    508196 6m4p:A (2.3) BS02 F4O ? GO:0004497 ... A0A286SBY7 32908132
    508197 6m4p:B (2.3) BS01 HEM ? GO:0004497 ... A0A286SBY7 32908132
    508198 6m4p:B (2.3) BS02 F4O ? GO:0004497 ... A0A286SBY7 32908132
    508199 6m4q:A (1.35) BS01 HEM ? GO:0004497 ... A0A286SBY7 32908132
    508200 6m4s:A (1.85) BS01 CA ? GO:0004497 ... M1GMS4 32775708

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).