SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2532 2533 2534 2535 2536 2537 2538 2539 2540 2541 2542 2543 2544 2545 2546 2547 2548 2549 2550 2551 2552 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    508201 6m4s:A (1.85) BS02 HEM ? GO:0004497 ... M1GMS4 32775708
    508202 6m4u:A (2.2) BS01 RAP 5.2.1.8 GO:0003007 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508203 6m4u:B (2.2) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 32747768 BindingDB: IC50=>10000nM, Kd=0.600000nM
    508204 6m4u:B (2.2) BS02 ZN 2.7.11.1 GO:0044877 ... P42345 32747768
    508205 6m4u:B (2.2) BS03 ZN 2.7.11.1 GO:0044877 ... P42345 32747768
    508206 6m4u:E (2.2) BS01 RAP 5.2.1.8 GO:0003007 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508207 6m4u:F (2.2) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 32747768 BindingDB: IC50=>10000nM, Kd=0.600000nM
    508208 6m4u:F (2.2) BS02 ZN 2.7.11.1 GO:0044877 ... P42345 32747768
    508209 6m4u:F (2.2) BS03 ZN 2.7.11.1 GO:0044877 ... P42345 32747768
    508210 6m4v:B (2.92) BS01 RAP 5.2.1.8 GO:0003755 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508211 6m4v:D (2.92) BS01 RAP 5.2.1.8 GO:0003755 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508212 6m4w:A (3.11) BS01 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508213 6m4w:A (3.11) BS02 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508214 6m4w:A (3.11) BS03 RAP 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508215 6m4w:B (3.11) BS01 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508216 6m4w:B (3.11) BS02 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508217 6m4w:C (3.11) BS01 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508218 6m4w:C (3.11) BS02 GLC 5.2.1.8 GO:0003755 ... P0AEX9
    P62942    		 32747768
    508219 6m4w:D (3.11) BS01 RAP 5.2.1.8 GO:0003755 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508220 6m4w:E (3.11) BS01 RAP 5.2.1.8 GO:0003755 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508221 6m4w:F (3.11) BS01 RAP 5.2.1.8 GO:0003755 ... P62942 32747768 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    508222 6m4w:G (3.11) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 32747768 BindingDB: IC50=>10000nM, Kd=0.600000nM
    508223 6m4w:H (3.11) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 32747768 BindingDB: IC50=>10000nM, Kd=0.600000nM
    508224 6m4w:I (3.11) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 32747768 BindingDB: IC50=>10000nM, Kd=0.600000nM
    508225 6m4x:A (2.998) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508226 6m4x:A (2.998) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508227 6m4x:B (2.998) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508228 6m4x:B (2.998) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508229 6m4x:D (2.998) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508230 6m4x:D (2.998) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508231 6m4x:G (2.998) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508232 6m4x:G (2.998) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508233 6m4x:I (2.998) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508234 6m4x:I (2.998) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508235 6m4z:A (2.803) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508236 6m4z:A (2.803) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508237 6m4z:B (2.803) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508238 6m4z:B (2.803) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508239 6m4z:D (2.803) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508240 6m4z:D (2.803) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508241 6m4z:G (2.803) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508242 6m4z:G (2.803) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508243 6m4z:I (2.803) BS01 peptide ? GO:0004888 ... Q8WSF8 N/A
    508244 6m4z:I (2.803) BS02 peptide ? GO:0004888 ... Q8WSF8 N/A
    508245 6m53:A (1.55) BS01 ZN ? GO:0005737 ... N1S495 32421914
    508246 6m53:B (1.55) BS01 ZN ? GO:0005737 ... N1S495 32421914
    508247 6m53:C (1.55) BS01 ZN ? GO:0005737 ... N1S495 32421914
    508248 6m53:D (1.55) BS01 ZN ? GO:0005737 ... N1S495 32421914
    508249 6m55:A (3.0) BS01 GAL ? GO:0004553 ... Q564N5 32713015
    508250 6m55:A (3.0) BS02 GAL ? GO:0004553 ... Q564N5 32713015
    508251 6m55:D (3.0) BS01 GAL ? GO:0004553 ... Q564N5 32713015
    508252 6m55:D (3.0) BS02 GAL ? GO:0004553 ... Q564N5 32713015
    508253 6m5a:A (1.85) BS01 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    508254 6m5a:A (1.85) BS02 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    508255 6m5a:A (1.85) BS03 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    508256 6m5e:A (2.8) BS01 peptide ? GO:0003677 ... P02768 33183011
    508257 6m5e:A (2.8) BS02 JEF ? GO:0003677 ... P02768 33183011
    508258 6m5e:A (2.8) BS03 JEF ? GO:0003677 ... P02768 33183011
    508259 6m5e:A (2.8) BS04 F8F ? GO:0003677 ... P02768 33183011
    508260 6m5e:A (2.8) BS05 M12 ? GO:0003677 ... P02768 33183011
    508261 6m5e:B (2.8) BS01 peptide ? GO:0003677 ... P02768 33183011
    508262 6m5e:B (2.8) BS02 peptide ? GO:0003677 ... P02768 33183011
    508263 6m5e:B (2.8) BS03 peptide ? GO:0003677 ... P02768 33183011
    508264 6m5e:B (2.8) BS04 JEF ? GO:0003677 ... P02768 33183011
    508265 6m5e:B (2.8) BS05 JEF ? GO:0003677 ... P02768 33183011
    508266 6m5e:B (2.8) BS06 M12 ? GO:0003677 ... P02768 33183011
    508267 6m5e:C (2.8) BS01 peptide ? GO:0003677 ... P02768 33183011
    508268 6m5e:C (2.8) BS02 peptide ? GO:0003677 ... P02768 33183011
    508269 6m5e:C (2.8) BS03 JEF ? GO:0003677 ... P02768 33183011
    508270 6m5e:C (2.8) BS04 M12 ? GO:0003677 ... P02768 33183011
    508271 6m5e:C (2.8) BS05 M12 ? GO:0003677 ... P02768 33183011
    508272 6m5g:A (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    508273 6m5g:B (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    508274 6m5g:C (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    508275 6m5g:D (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    508276 6m5g:E (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    508277 6m5m:A (1.7) BS01 CA ? N/A A0A2Z6G7U6 32510468
    508278 6m5m:A (1.7) BS02 CA ? N/A A0A2Z6G7U6 32510468
    508279 6m5m:B (1.7) BS01 CA ? N/A A0A2Z6G7U3 32510468
    508280 6m5m:B (1.7) BS02 CA ? N/A A0A2Z6G7U3 32510468
    508281 6m5o:A (2.30001) BS01 DXC 2.1.2.1 GO:0002082 ... P34897 33521601
    508282 6m5o:A (2.30001) BS02 DXC 2.1.2.1 GO:0002082 ... P34897 33521601
    508283 6m5o:A (2.30001) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 33521601
    508284 6m5o:B (2.30001) BS01 DXC 2.1.2.1 GO:0002082 ... P34897 33521601
    508285 6m5o:B (2.30001) BS02 DXC 2.1.2.1 GO:0002082 ... P34897 33521601
    508286 6m5o:B (2.30001) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 33521601
    508287 6m5p:A (1.25) BS01 MER 3.5.2.6 GO:0000166 ... Q9XB24 32888908
    508288 6m5q:A (1.3) BS01 IM2 3.5.2.6 GO:0000166 ... Q9XB24 32888908
    508289 6m5r:B (3.5) BS01 ZN ? GO:0005515 ... P10212 32328903
    508290 6m5r:B (3.5) BS02 ZN ? GO:0005515 ... P10212 32328903
    508291 6m5s:B (3.9) BS01 ZN ? GO:0005515 ... P10212 32328903
    508292 6m5s:B (3.9) BS02 ZN ? GO:0005515 ... P10212 32328903
    508293 6m5u:A (3.8) BS01 ADP 3.1.-.- GO:0003677 ... P04295 32328903
    508294 6m5u:B (3.8) BS01 ZN ? GO:0005515 ... P10212 32328903
    508295 6m5u:B (3.8) BS02 ZN ? GO:0005515 ... P10212 32328903
    508296 6m5v:A (4.5) BS01 ADP 3.1.-.- GO:0003677 ... P04295 32328903
    508297 6m5v:B (4.5) BS01 ZN ? GO:0005515 ... P10212 32328903
    508298 6m5v:B (4.5) BS02 ZN ? GO:0005515 ... P10212 32328903
    508299 6m5w:A (3.1) BS01 PLP 2.1.2.1 GO:0000900 ... P34896 33521601
    508300 6m5w:A (3.1) BS02 DXC 2.1.2.1 GO:0000900 ... P34896 33521601
    508301 6m5x:O (2.05991) BS01 NAD 1.2.1.12 GO:0000166 ... G9NDK9 N/A
    508302 6m5x:P (2.05991) BS01 NAD 1.2.1.12 GO:0000166 ... G9NDK9 N/A
    508303 6m5x:Q (2.05991) BS01 NAD 1.2.1.12 GO:0000166 ... G9NDK9 N/A
    508304 6m5x:R (2.05991) BS01 NAD 1.2.1.12 GO:0000166 ... G9NDK9 N/A
    508305 6m5y:A (1.38) BS01 BGC ? GO:0002317 ... P09382 34735570
    508306 6m5y:A (1.38) BS02 GAL ? GO:0002317 ... P09382 34735570
    508307 6m5y:A (1.38) BS03 GLC ? GO:0002317 ... P09382 34735570
    508308 6m5y:A (1.38) BS04 GAL ? GO:0002317 ... P09382 34735570
    508309 6m5z:A (1.65) BS01 MAN ? GO:0004348 ... A0A6N4SL16 32744245
    508310 6m5z:B (1.65) BS01 MAN ? GO:0004348 ... A0A6N4SL16 32744245
    508311 6m60:A (2.17) BS01 MG 3.6.5.- GO:0000054 ... P62826 33890470
    508312 6m60:A (2.17) BS02 GTP 3.6.5.- GO:0000054 ... P62826 33890470
    508313 6m60:C (2.17) BS01 F2X ? GO:0000055 ... P30822 33890470
    508314 6m60:C (2.17) BS02 F2X ? GO:0000055 ... P30822 33890470
    508315 6m60:C (2.17) BS03 F2X ? GO:0000055 ... P30822 33890470
    508316 6m61:O (1.8245) BS01 ZN 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508317 6m61:O (1.8245) BS02 F4F 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508318 6m61:O (1.8245) BS03 NAD 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508319 6m61:P (1.8245) BS01 ZN 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508320 6m61:Q (1.8245) BS01 ZN 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508321 6m61:Q (1.8245) BS02 F4F 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508322 6m61:Q (1.8245) BS03 NAD 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P04406 N/A
    508323 6m62:4 (3.2) BS01 rna 3.-.-.- GO:0000055 ... Q03862 32719344
    508324 6m62:4 (3.2) BS02 rna 3.-.-.- GO:0000055 ... Q03862 32719344
    508325 6m62:5 (3.2) BS01 rna ? GO:0003674 ... P53188 32719344
    508326 6m62:5 (3.2) BS02 rna ? GO:0003674 ... P53188 32719344
    508327 6m62:A (3.2) BS01 rna ? GO:0002181 ... P0CX45 32719344
    508328 6m62:B (3.2) BS01 rna ? GO:0000027 ... P14126 32719344
    508329 6m62:C (3.2) BS01 rna ? GO:0002181 ... P10664 32719344
    508330 6m62:C (3.2) BS02 rna ? GO:0002181 ... P10664 32719344
    508331 6m62:D (3.2) BS01 rna ? GO:0000027 ... P26321 32719344
    508332 6m62:D (3.2) BS02 rna ? GO:0000027 ... P26321 32719344
    508333 6m62:E (3.2) BS01 rna ? GO:0000027 ... Q02326 32719344
    508334 6m62:F (3.2) BS01 rna ? GO:0000463 ... P05737 32719344
    508335 6m62:G (3.2) BS01 rna ? GO:0000470 ... P17076 32719344
    508336 6m62:G (3.2) BS02 rna ? GO:0000470 ... P17076 32719344
    508337 6m62:G (3.2) BS03 rna ? GO:0000470 ... P17076 32719344
    508338 6m62:H (3.2) BS01 rna ? GO:0002181 ... P05738 32719344
    508339 6m62:I (3.2) BS01 rna ? GO:0000055 ... Q08004 32719344
    508340 6m62:I (3.2) BS02 ZN ? GO:0000055 ... Q08004 32719344
    508341 6m62:J (3.2) BS01 rna ? GO:0000027 ... P0C0W9 32719344
    508342 6m62:J (3.2) BS02 rna ? GO:0000027 ... P0C0W9 32719344
    508343 6m62:K (3.2) BS01 rna ? GO:0000463 ... P38779 32719344
    508344 6m62:L (3.2) BS01 rna ? GO:0002181 ... Q12690 32719344
    508345 6m62:L (3.2) BS02 rna ? GO:0002181 ... Q12690 32719344
    508346 6m62:M (3.2) BS01 rna ? GO:0000027 ... P36105 32719344
    508347 6m62:N (3.2) BS01 rna ? GO:0002181 ... P05748 32719344
    508348 6m62:N (3.2) BS02 rna ? GO:0002181 ... P05748 32719344
    508349 6m62:O (3.2) BS01 rna ? GO:0000470 ... P26784 32719344
    508350 6m62:P (3.2) BS01 rna ? GO:0000448 ... P05740 32719344
    508351 6m62:P (3.2) BS02 rna ? GO:0000448 ... P05740 32719344
    508352 6m62:Q (3.2) BS01 rna ? GO:0002181 ... P0CX49 32719344
    508353 6m62:R (3.2) BS01 rna ? GO:0002181 ... P0CX82 32719344
    508354 6m62:S (3.2) BS01 rna ? GO:0002181 ... P0CX23 32719344
    508355 6m62:T (3.2) BS01 rna ? GO:0002181 ... Q02753 32719344
    508356 6m62:U (3.2) BS01 rna ? GO:0002181 ... P05749 32719344
    508357 6m62:V (3.2) BS01 rna ? GO:0002181 ... P0CX41 32719344
    508358 6m62:W (3.2) BS01 rna ? GO:0000027 ... P33201 32719344
    508359 6m62:X (3.2) BS01 rna ? GO:0000027 ... P04456 32719344
    508360 6m62:X (3.2) BS02 rna ? GO:0000027 ... P04456 32719344
    508361 6m62:Y (3.2) BS01 rna ? GO:0002181 ... P05743 32719344
    508362 6m62:Y (3.2) BS02 rna ? GO:0002181 ... P05743 32719344
    508363 6m62:Z (3.2) BS01 rna ? GO:0002181 ... P0C2H6 32719344
    508364 6m62:a (3.2) BS01 rna ? GO:0002181 ... P02406 32719344
    508365 6m62:b (3.2) BS01 rna ? GO:0000054 ... Q02892 32719344
    508366 6m62:b (3.2) BS02 rna ? GO:0000054 ... Q02892 32719344
    508367 6m62:b (3.2) BS03 GTP ? GO:0000054 ... Q02892 32719344
    508368 6m62:c (3.2) BS01 rna ? GO:0002181 ... P14120 32719344
    508369 6m62:d (3.2) BS01 rna ? GO:0002181 ... P0C2H8 32719344
    508370 6m62:e (3.2) BS01 rna ? GO:0002181 ... P38061 32719344
    508371 6m62:f (3.2) BS01 rna ? GO:0000027 ... P05744 32719344
    508372 6m62:g (3.2) BS01 rna ? GO:0002181 ... P87262 32719344
    508373 6m62:h (3.2) BS01 rna ? GO:0000463 ... P0CX84 32719344
    508374 6m62:h (3.2) BS02 rna ? GO:0000463 ... P0CX84 32719344
    508375 6m62:i (3.2) BS01 rna ? GO:0002181 ... P05745 32719344
    508376 6m62:j (3.2) BS01 rna ? GO:0000448 ... P49166 32719344
    508377 6m62:j (3.2) BS02 rna ? GO:0000448 ... P49166 32719344
    508378 6m62:j (3.2) BS03 ZN ? GO:0000448 ... P49166 32719344
    508379 6m62:k (3.2) BS01 rna ? GO:0002181 ... P49167 32719344
    508380 6m62:l (3.2) BS01 rna ? GO:0002181 ... P04650 32719344
    508381 6m62:l (3.2) BS02 rna ? GO:0002181 ... P04650 32719344
    508382 6m62:m (3.2) BS01 rna ? GO:0000055 ... P53742 32719344
    508383 6m62:m (3.2) BS02 GTP ? GO:0000055 ... P53742 32719344
    508384 6m62:m (3.2) BS03 MG ? GO:0000055 ... P53742 32719344
    508385 6m62:n (3.2) BS01 rna ? GO:0000462 ... P53261 32719344
    508386 6m62:n (3.2) BS02 rna ? GO:0000462 ... P53261 32719344
    508387 6m62:o (3.2) BS01 rna ? GO:0000463 ... P53927 32719344
    508388 6m62:p (3.2) BS01 rna ? GO:0002181 ... P0CX25 32719344
    508389 6m62:p (3.2) BS02 ZN ? GO:0002181 ... P0CX25 32719344
    508390 6m62:q (3.2) BS01 rna ? GO:0000027 ... Q12080 32719344
    508391 6m62:q (3.2) BS02 rna ? GO:0000027 ... Q12080 32719344
    508392 6m62:r (3.2) BS01 rna ? GO:0000460 ... P40078 32719344
    508393 6m62:s (3.2) BS01 rna ? GO:0000055 ... P40010 32719344
    508394 6m62:t (3.2) BS01 rna ? GO:0000463 ... P40693 32719344
    508395 6m62:t (3.2) BS02 rna ? GO:0000463 ... P40693 32719344
    508396 6m62:t (3.2) BS03 rna ? GO:0000463 ... P40693 32719344
    508397 6m62:u (3.2) BS01 rna ? GO:0001671 ... Q07915 32719344
    508398 6m62:u (3.2) BS02 ZN ? GO:0001671 ... Q07915 32719344
    508399 6m62:v (3.2) BS01 rna ? GO:0000027 ... P36160 32719344
    508400 6m62:v (3.2) BS02 rna ? GO:0000027 ... P36160 32719344
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).