SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    509001 6mdn:E (4.4) BS02 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509002 6mdn:F (4.4) BS01 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509003 6mdo:A (3.9) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509004 6mdo:A (3.9) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509005 6mdo:A (3.9) BS03 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509006 6mdo:A (3.9) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509007 6mdo:B (3.9) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509008 6mdo:B (3.9) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509009 6mdo:B (3.9) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509010 6mdo:B (3.9) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509011 6mdo:C (3.9) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509012 6mdo:C (3.9) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509013 6mdo:C (3.9) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509014 6mdo:C (3.9) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509015 6mdo:D (3.9) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509016 6mdo:D (3.9) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509017 6mdo:D (3.9) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509018 6mdo:D (3.9) BS04 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509019 6mdo:E (3.9) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509020 6mdo:E (3.9) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509021 6mdo:E (3.9) BS03 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509022 6mdo:F (3.9) BS01 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509023 6mdp:A (3.8) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509024 6mdp:A (3.8) BS02 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509025 6mdp:A (3.8) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509026 6mdp:A (3.8) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509027 6mdp:B (3.8) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509028 6mdp:B (3.8) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509029 6mdp:B (3.8) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509030 6mdp:B (3.8) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509031 6mdp:C (3.8) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509032 6mdp:C (3.8) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509033 6mdp:C (3.8) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509034 6mdp:C (3.8) BS04 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509035 6mdp:D (3.8) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509036 6mdp:D (3.8) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509037 6mdp:D (3.8) BS03 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509038 6mdp:E (3.8) BS01 peptide 3.6.4.6 GO:0000149 ... P18708 30198481
    509039 6mdp:E (3.8) BS02 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509040 6mdp:E (3.8) BS03 ADP 3.6.4.6 GO:0000149 ... P18708 30198481
    509041 6mdp:F (3.8) BS01 ATP 3.6.4.6 GO:0000149 ... P18708 30198481
    509042 6mdq:A (2.15) BS01 TES ? GO:0003677 ... P35747 30842823
    509043 6mdq:A (2.15) BS02 TES ? GO:0003677 ... P35747 30842823
    509044 6mds:A (2.5) BS01 BMA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509045 6mds:A (2.5) BS02 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509046 6mds:A (2.5) BS03 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509047 6mds:A (2.5) BS04 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509048 6mds:B (2.5) BS01 BMA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509049 6mds:B (2.5) BS02 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509050 6mds:B (2.5) BS03 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509051 6mdt:D (3.816) BS01 MAN N/A N/A N/A 30770829
    509052 6mdt:L (3.816) BS01 MAN N/A N/A N/A 30770829
    509053 6mdu:A (1.15) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 30942078
    509054 6mdu:A (1.15) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 30942078
    509055 6mdu:A (1.15) BS03 N1G 3.5.2.6 GO:0008270 ... C7C422 30942078 MOAD: Ki=56uM
    509056 6mdv:A (2.5) BS01 BMA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509057 6mdv:A (2.5) BS02 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509058 6mdv:A (2.5) BS03 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509059 6mdv:A (2.5) BS04 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509060 6mdv:A (2.5) BS05 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509061 6mdv:B (2.5) BS01 BMA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509062 6mdv:B (2.5) BS02 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509063 6mdv:B (2.5) BS03 MAN 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509064 6mdv:B (2.5) BS04 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    509065 6mdw:A (1.5) BS01 ADP 3.4.24.- GO:0003697 ... Q9H040 30893605
    509066 6mdw:A (1.5) BS02 ZN 3.4.24.- GO:0003697 ... Q9H040 30893605
    509067 6mdw:A (1.5) BS03 ZN 3.4.24.- GO:0003697 ... Q9H040 30893605
    509068 6mdx:A (1.55) BS01 dna 3.4.24.- GO:0003697 ... Q9H040 30893605
    509069 6mdx:A (1.55) BS02 ZN 3.4.24.- GO:0003697 ... Q9H040 30893605
    509070 6mdx:A (1.55) BS03 ZN 3.4.24.- GO:0003697 ... Q9H040 30893605
    509071 6mdz:A (3.4) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509072 6mdz:A (3.4) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509073 6mdz:B (3.4) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509074 6mdz:B (3.4) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509075 6me0:C (3.6) BS01 rna ? GO:0003676 ... Q8DMK2 31348888
    509076 6me0:C (3.6) BS02 dna ? GO:0003676 ... Q8DMK2 31348888
    509077 6me1:A (1.97) BS01 peptide N/A N/A N/A 30770829
    509078 6me1:B (1.97) BS01 peptide N/A N/A N/A 30770829
    509079 6me1:C (1.97) BS01 peptide N/A N/A N/A 30770829
    509080 6me1:D (1.97) BS01 peptide N/A N/A N/A 30770829
    509081 6me2:A (2.8) BS01 JEV ? GO:0004930 ... P48039
    Q9V2J8
    31019306
    509082 6me3:A (2.9) BS01 JEY ? GO:0004930 ... P48039
    Q9V2J8
    31019306
    509083 6me4:A (3.2) BS01 ML2 ? GO:0004930 ... P48039
    Q9V2J8
    31019306
    509084 6me5:A (3.2) BS01 AWY ? GO:0004930 ... P48039
    Q9V2J8
    31019306
    509085 6me6:A (2.8) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509086 6me6:A (2.8) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509087 6me6:B (2.8) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509088 6me7:A (3.2) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509089 6me7:A (3.2) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509090 6me7:B (3.2) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509091 6me8:A (3.1) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509092 6me8:A (3.1) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509093 6me8:B (3.1) BS01 JEY ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509094 6me9:A (3.3) BS01 JEV ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509095 6me9:A (3.3) BS02 ZN ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509096 6me9:B (3.3) BS01 JEV ? GO:0004930 ... P00268
    P0ABE7
    P49286
    31019305
    509097 6mea:A (1.35) BS01 APR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509098 6mea:B (1.35) BS01 APR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509099 6meb:A (1.8) BS01 NAD 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509100 6meb:B (1.8) BS01 NAD 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509101 6mec:C (3.6) BS01 rna ? GO:0003676 ... Q8DMK2 31348888
    509102 6mec:C (3.6) BS02 dna ? GO:0003676 ... Q8DMK2 31348888
    509103 6men:A (1.5) BS01 ADQ 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509104 6men:B (1.5) BS01 ADQ 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0C6W3 N/A
    509105 6meo:G (3.9) BS01 MAN ? GO:0019031 ... Q70145 30542158
    509106 6mep:A (2.893) BS01 9VS 2.7.10.1 GO:0004672 ... Q12866 31497954
    509107 6mep:B (2.893) BS01 MG 2.7.10.1 GO:0004672 ... Q12866 31497954
    509108 6mep:B (2.893) BS02 9VS 2.7.10.1 GO:0004672 ... Q12866 31497954
    509109 6meq:A (2.9) BS01 CA ? GO:0005509 ... Q9Y5G1 31431536
    509110 6meq:A (2.9) BS02 CA ? GO:0005509 ... Q9Y5G1 31431536
    509111 6meq:A (2.9) BS03 CA ? GO:0005509 ... Q9Y5G1 31431536
    509112 6meq:A (2.9) BS04 CA ? GO:0005509 ... Q9Y5G1 31431536
    509113 6meq:A (2.9) BS05 CA ? GO:0005509 ... Q9Y5G1 31431536
    509114 6meq:A (2.9) BS06 CA ? GO:0005509 ... Q9Y5G1 31431536
    509115 6meq:A (2.9) BS07 CA ? GO:0005509 ... Q9Y5G1 31431536
    509116 6meq:A (2.9) BS08 CA ? GO:0005509 ... Q9Y5G1 31431536
    509117 6meq:A (2.9) BS09 CA ? GO:0005509 ... Q9Y5G1 31431536
    509118 6mer:A (3.0) BS01 CA ? GO:0005509 ... Q9Y5G1 31431536
    509119 6mer:A (3.0) BS02 CA ? GO:0005509 ... Q9Y5G1 31431536
    509120 6mer:A (3.0) BS03 CA ? GO:0005509 ... Q9Y5G1 31431536
    509121 6mer:A (3.0) BS04 CA ? GO:0005509 ... Q9Y5G1 31431536
    509122 6mer:A (3.0) BS05 CA ? GO:0005509 ... Q9Y5G1 31431536
    509123 6mer:A (3.0) BS06 CA ? GO:0005509 ... Q9Y5G1 31431536
    509124 6mer:A (3.0) BS07 CA ? GO:0005509 ... Q9Y5G1 31431536
    509125 6mer:A (3.0) BS08 CA ? GO:0005509 ... Q9Y5G1 31431536
    509126 6mer:A (3.0) BS09 CA ? GO:0005509 ... Q9Y5G1 31431536
    509127 6mes:A (2.9) BS01 MET 6.1.1.10 GO:0000166 ... Q38C91 N/A
    509128 6mes:B (2.9) BS01 JFA 6.1.1.10 GO:0000166 ... Q38C91 N/A
    509129 6met:G (4.5) BS01 MAN ? GO:0019031 ... Q70145 30542158
    509130 6mev:A (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509131 6mev:A (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509132 6mev:A (2.6) BS03 NMM 1.14.11.- N/A Q6NYC1 32048991
    509133 6mev:B (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509134 6mev:B (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509135 6mev:C (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509136 6mev:C (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509137 6mev:D (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509138 6mev:D (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509139 6mev:E (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509140 6mev:E (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509141 6mev:E (2.6) BS03 NMM 1.14.11.- N/A Q6NYC1 32048991
    509142 6mev:F (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509143 6mev:F (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509144 6mev:G (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509145 6mev:G (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509146 6mev:G (2.6) BS03 NMM 1.14.11.- N/A Q6NYC1 32048991
    509147 6mev:H (2.6) BS01 AKG 1.14.11.- N/A Q6NYC1 32048991
    509148 6mev:H (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    509149 6mev:H (2.6) BS03 NMM 1.14.11.- N/A Q6NYC1 32048991
    509150 6mew:A (1.78) BS01 peptide ? N/A O14593 N/A
    509151 6mew:C (1.78) BS01 peptide ? N/A O14593 N/A
    509152 6mew:C (1.78) BS02 peptide ? N/A O14593 N/A
    509153 6mey:A (1.42) BS01 O5E 3.5.2.6 GO:0008800 ... Q9F663 30942078 MOAD: Ki=479uM
    509154 6mey:A (1.42) BS02 O5E 3.5.2.6 GO:0008800 ... Q9F663 30942078 MOAD: Ki=479uM
    509155 6mey:A (1.42) BS03 O5E 3.5.2.6 GO:0008800 ... Q9F663 30942078 MOAD: Ki=479uM
    509156 6mez:A (1.74) BS01 BCL ? GO:0015979 ... P11741 30839291
    509157 6mez:A (1.74) BS02 BCL ? GO:0015979 ... P11741 30839291
    509158 6mez:A (1.74) BS03 BCL ? GO:0015979 ... P11741 30839291
    509159 6mez:A (1.74) BS04 BCL ? GO:0015979 ... P11741 30839291
    509160 6mez:A (1.74) BS05 BCL ? GO:0015979 ... P11741 30839291
    509161 6mez:A (1.74) BS06 BCL ? GO:0015979 ... P11741 30839291
    509162 6mez:A (1.74) BS07 BCL ? GO:0015979 ... P11741 30839291
    509163 6mez:B (1.74) BS01 BCL ? GO:0015979 ... P11741 30839291
    509164 6mez:B (1.74) BS02 BCL ? GO:0015979 ... P11741 30839291
    509165 6mez:B (1.74) BS03 BCL ? GO:0015979 ... P11741 30839291
    509166 6mez:B (1.74) BS04 BCL ? GO:0015979 ... P11741 30839291
    509167 6mez:B (1.74) BS05 BCL ? GO:0015979 ... P11741 30839291
    509168 6mez:B (1.74) BS06 BCL ? GO:0015979 ... P11741 30839291
    509169 6mez:B (1.74) BS07 BCL ? GO:0015979 ... P11741 30839291
    509170 6mf0:A (3.2) BS01 CA ? GO:0005507 ... P00451
    P12263
    31454152
    509171 6mf0:A (3.2) BS02 ZN ? GO:0005507 ... P00451
    P12263
    31454152
    509172 6mf0:A (3.2) BS03 CU1 ? GO:0005507 ... P00451
    P12263
    31454152
    509173 6mf0:B (3.2) BS01 CA ? GO:0005507 ... P00451
    P12263
    31454152
    509174 6mf0:B (3.2) BS02 ZN ? GO:0005507 ... P00451
    P12263
    31454152
    509175 6mf0:B (3.2) BS03 CU1 ? GO:0005507 ... P00451
    P12263
    31454152
    509176 6mf2:A (3.60936) BS01 CA ? GO:0005507 ... P00451 31454152
    509177 6mf2:A (3.60936) BS02 ZN ? GO:0005507 ... P00451 31454152
    509178 6mf2:A (3.60936) BS03 CU1 ? GO:0005507 ... P00451 31454152
    509179 6mf4:A (1.8) BS01 ZN 2.7.11.21 N/A P32562 32099015
    509180 6mf5:A (2.7) BS01 peptide 2.7.11.21 N/A P32562 32099015
    509181 6mf5:B (2.7) BS01 peptide 2.7.11.21 N/A P32562 32099015
    509182 6mf6:A (3.4) BS01 peptide 2.7.11.21 N/A P32562 32099015
    509183 6mf6:B (3.4) BS01 peptide 2.7.11.21 N/A P32562 32099015
    509184 6mf9:A (2.037) BS01 R78 ? GO:0000124 ... Q5CQH9 N/A
    509185 6mf9:B (2.037) BS01 R78 ? GO:0000124 ... Q5CQH9 N/A
    509186 6mfb:A (2.5) BS01 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509187 6mfb:A (2.5) BS02 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509188 6mfb:B (2.5) BS01 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509189 6mfb:B (2.5) BS02 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509190 6mfb:C (2.5) BS01 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509191 6mfb:C (2.5) BS02 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509192 6mfb:D (2.5) BS01 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509193 6mfb:D (2.5) BS02 PLP 2.6.1.44
    2.6.1.63
    GO:0004760 ... Q0IG34 N/A
    509194 6mfd:A (2.794) BS01 CO6 ? GO:0016747 ... U6BSB2 31785925
    509195 6mfd:B (2.794) BS01 CO6 ? GO:0016747 ... U6BSB2 31785925
    509196 6mfe:A (1.444) BS01 A3P ? GO:0016740 ... G4VLE5 30344901
    509197 6mfe:A (1.444) BS02 S73 ? GO:0016740 ... G4VLE5 30344901
    509198 6mfi:A (1.839) BS01 ZN ? N/A K4KM71 28261912
    509199 6mfi:A (1.839) BS02 ZN ? N/A K4KM71 28261912
    509200 6mfl:A (1.9) BS01 OPV ? GO:0006826 ... Q76HK0 30406986 MOAD: Kd=160nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).