SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    509201 6mfl:A (1.9) BS02 OPV ? GO:0006826 ... Q76HK0 30406986 MOAD: Kd=160nM
    509202 6mfl:B (1.9) BS01 OPV ? GO:0006826 ... Q76HK0 30406986 MOAD: Kd=160nM
    509203 6mfl:B (1.9) BS02 OPV ? GO:0006826 ... Q76HK0 30406986 MOAD: Kd=160nM
    509204 6mfm:A (1.9) BS01 TPP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509205 6mfm:A (1.9) BS02 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509206 6mfm:A (1.9) BS03 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509207 6mfm:A (1.9) BS04 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509208 6mfm:A (1.9) BS05 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509209 6mfm:B (1.9) BS01 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509210 6mfm:B (1.9) BS02 ADP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509211 6mfm:B (1.9) BS03 TPP 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509212 6mfm:B (1.9) BS04 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509213 6mfm:B (1.9) BS05 MG 2.7.4.16 GO:0000287 ... A0A0D5YC82 30867460
    509214 6mfn:A (2.5) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509215 6mfn:A (2.5) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509216 6mfo:A (3.15) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    509217 6mfo:A (3.15) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    509218 6mfo:A (3.15) BS03 CA ? GO:0005509 ... Q96QU1 32963095
    509219 6mfo:A (3.15) BS04 CA ? GO:0005509 ... Q96QU1 32963095
    509220 6mfo:A (3.15) BS05 CA ? GO:0005509 ... Q96QU1 32963095
    509221 6mfp:A (3.0) BS01 peptide ? GO:0019031 ... A0A0M3KKW9 31776278
    509222 6mfp:G (3.0) BS01 peptide ? GO:0019031 ... A0A0M3KKW9 31776278
    509223 6mfr:A (3.6) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509224 6mfr:A (3.6) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509225 6mfr:B (3.6) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509226 6mfr:B (3.6) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 31353209
    509227 6mfs:A (2.85) BS01 PIO ? GO:0005856 ... P26039 30254158
    509228 6mfs:A (2.85) BS02 PO4 ? GO:0005856 ... P26039 30254158
    509229 6mfu:A (1.6) BS01 5GP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509230 6mfu:A (1.6) BS02 ADP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509231 6mfu:B (1.6) BS01 5GP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509232 6mfu:B (1.6) BS02 ADP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509233 6mfu:C (1.6) BS01 5GP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509234 6mfu:C (1.6) BS02 ADP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509235 6mfu:D (1.6) BS01 5GP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509236 6mfu:D (1.6) BS02 ADP 2.7.4.8 GO:0004385 ... J9VQ84 N/A
    509237 6mfv:A (3.4) BS01 ADP ? GO:0043531 ... O58663 30788511
    509238 6mfv:B (3.4) BS01 ADP ? GO:0043531 ... O58663 30788511
    509239 6mfv:C (3.4) BS01 ADP ? GO:0043531 ... O58663 30788511
    509240 6mfv:D (3.4) BS01 ADP ? GO:0043531 ... O58663 30788511
    509241 6mfw:A (2.5) BS01 JQG ? GO:0003824 ... Q70LM7 31699907
    509242 6mfw:A (2.5) BS02 FON ? GO:0003824 ... Q70LM7 31699907
    509243 6mfw:A (2.5) BS03 APC ? GO:0003824 ... Q70LM7 31699907
    509244 6mfw:A (2.5) BS04 VAL ? GO:0003824 ... Q70LM7 31699907
    509245 6mfx:A (2.2) BS01 9EF ? GO:0003824 ... Q70LM7 31699907
    509246 6mfx:A (2.2) BS02 APC ? GO:0003824 ... Q70LM7 31699907
    509247 6mfx:A (2.2) BS03 VAL ? GO:0003824 ... Q70LM7 31699907
    509248 6mfy:A (2.5) BS01 PNS ? GO:0003824 ... Q70LM7 31699907
    509249 6mfz:A (6.0) BS01 PNS ? GO:0003824 ... Q70LM7 31699907
    509250 6mfz:A (6.0) BS02 PNS ? GO:0003824 ... Q70LM7 31699907
    509251 6mg0:A (6.0) BS01 DG9 ? GO:0003824 ... Q70LM7 31699907
    509252 6mg0:B (6.0) BS01 DG9 ? GO:0003824 ... Q70LM7 31699907
    509253 6mg1:A (1.75) BS01 dna ? GO:0003700 ... P17676 30566668
    509254 6mg1:A (1.75) BS02 dna ? GO:0003700 ... P17676 30566668
    509255 6mg1:B (1.75) BS01 dna ? GO:0003700 ... P17676 30566668
    509256 6mg1:B (1.75) BS02 dna ? GO:0003700 ... P17676 30566668
    509257 6mg2:A (1.928) BS01 dna ? GO:0003700 ... P17676 30566668
    509258 6mg2:A (1.928) BS02 dna ? GO:0003700 ... P17676 30566668
    509259 6mg2:B (1.928) BS01 dna ? GO:0003700 ... P17676 30566668
    509260 6mg2:B (1.928) BS02 dna ? GO:0003700 ... P17676 30566668
    509261 6mg3:A (2.05) BS01 dna ? GO:0003700 ... P17676 30566668
    509262 6mg3:A (2.05) BS02 dna ? GO:0003700 ... P17676 30566668
    509263 6mg3:B (2.05) BS01 dna ? GO:0003700 ... P17676 30566668
    509264 6mg3:B (2.05) BS02 dna ? GO:0003700 ... P17676 30566668
    509265 6mg5:A (1.8) BS01 6ZW N/A N/A N/A 30971495
    509266 6mg5:B (1.8) BS01 6ZW N/A N/A N/A 30971495 MOAD: Kd=20.3uM
    509267 6mg7:G (2.91) BS01 peptide ? GO:0019031 ... A0A0M3KKW9 32605979
    509268 6mg8:A (3.6) BS01 CLR ? GO:0008158 ... Q61115 30415841
    509269 6mg8:A (3.6) BS02 CLR ? GO:0008158 ... Q61115 30415841
    509270 6mg8:A (3.6) BS03 CLR ? GO:0008158 ... Q61115 30415841
    509271 6mg8:A (3.6) BS04 CLR ? GO:0008158 ... Q61115 30415841
    509272 6mga:A (3.15) BS01 CA ? GO:0005509 ... Q08174 31583286
    509273 6mga:A (3.15) BS02 CA ? GO:0005509 ... Q08174 31583286
    509274 6mga:A (3.15) BS03 CA ? GO:0005509 ... Q08174 31583286
    509275 6mga:A (3.15) BS04 CA ? GO:0005509 ... Q08174 31583286
    509276 6mga:A (3.15) BS05 CA ? GO:0005509 ... Q08174 31583286
    509277 6mga:A (3.15) BS06 CA ? GO:0005509 ... Q08174 31583286
    509278 6mga:A (3.15) BS07 CA ? GO:0005509 ... Q08174 31583286
    509279 6mga:A (3.15) BS08 CA ? GO:0005509 ... Q08174 31583286
    509280 6mga:A (3.15) BS09 CA ? GO:0005509 ... Q08174 31583286
    509281 6mgb:A (1.8) BS01 C5P ? GO:0000271 ... A0A179D1D1 31036922
    509282 6mgc:A (1.35) BS01 C5P ? GO:0000271 ... A0A0H2Z2W8 31036922
    509283 6mgf:A (2.982) BS01 ADP 7.5.2.- GO:0005515 ... P0A9V1 N/A
    509284 6mgf:A (2.982) BS02 CZJ 7.5.2.- GO:0005515 ... P0A9V1 N/A
    509285 6mgg:A (1.78) BS01 COA 6.2.1.5 GO:0000166 ... Q5NHF4 N/A
    509286 6mgg:C (1.78) BS01 COA 6.2.1.5 GO:0000166 ... Q5NHF4 N/A
    509287 6mgh:A (1.95) BS01 JRA N/A N/A N/A 30655515
    509288 6mgh:B (1.95) BS01 JRA N/A N/A N/A 30655515
    509289 6mgh:C (1.95) BS01 JRA N/A N/A N/A 30655515
    509290 6mgh:D (1.95) BS01 JRA N/A N/A N/A 30655515
    509291 6mgh:E (1.95) BS01 JRA N/A N/A N/A 30655515
    509292 6mgh:F (1.95) BS01 JRA N/A N/A N/A 30655515
    509293 6mgh:G (1.95) BS01 JRA N/A N/A N/A 30655515
    509294 6mgh:H (1.95) BS01 JRA N/A N/A N/A 30655515
    509295 6mgi:A (2.986) BS01 GLY 4.1.1.31 GO:0003824 ... P04711 32459324
    509296 6mgi:A (2.986) BS02 G6P 4.1.1.31 GO:0003824 ... P04711 32459324
    509297 6mgi:A (2.986) BS03 PGA 4.1.1.31 GO:0003824 ... P04711 32459324
    509298 6mgi:A (2.986) BS04 G6P 4.1.1.31 GO:0003824 ... P04711 32459324
    509299 6mgi:B (2.986) BS01 G6P 4.1.1.31 GO:0003824 ... P04711 32459324
    509300 6mgi:B (2.986) BS02 GLY 4.1.1.31 GO:0003824 ... P04711 32459324
    509301 6mgi:B (2.986) BS03 G6P 4.1.1.31 GO:0003824 ... P04711 32459324
    509302 6mgi:B (2.986) BS04 PGA 4.1.1.31 GO:0003824 ... P04711 32459324
    509303 6mgj:A (2.0) BS01 MG ? N/A N/A 30463871
    509304 6mgj:B (2.0) BS01 MG ? N/A N/A 30463871
    509305 6mgj:B (2.0) BS02 MG ? N/A N/A 30463871
    509306 6mgj:C (2.0) BS01 MG ? N/A N/A 30463871
    509307 6mgj:D (2.0) BS01 MG ? N/A N/A 30463871
    509308 6mgj:E (2.0) BS01 MG ? N/A N/A 30463871
    509309 6mgj:F (2.0) BS01 MG ? N/A N/A 30463871
    509310 6mgj:G (2.0) BS01 MG ? N/A N/A 30463871
    509311 6mgj:H (2.0) BS01 MG ? N/A N/A 30463871
    509312 6mgk:A (2.1) BS01 BGC ? N/A N/A 30463871
    509313 6mgk:A (2.1) BS02 XYS ? N/A N/A 30463871
    509314 6mgk:A (2.1) BS03 XYS ? N/A N/A 30463871
    509315 6mgk:B (2.1) BS01 BGC ? N/A N/A 30463871
    509316 6mgk:B (2.1) BS02 XYS ? N/A N/A 30463871
    509317 6mgk:B (2.1) BS03 XYS ? N/A N/A 30463871
    509318 6mgk:B (2.1) BS04 XYS ? N/A N/A 30463871
    509319 6mgk:C (2.1) BS01 BGC ? N/A N/A 30463871
    509320 6mgk:C (2.1) BS02 XYS ? N/A N/A 30463871
    509321 6mgk:C (2.1) BS03 XYS ? N/A N/A 30463871
    509322 6mgk:D (2.1) BS01 BGC ? N/A N/A 30463871
    509323 6mgk:D (2.1) BS02 XYS ? N/A N/A 30463871
    509324 6mgk:D (2.1) BS03 XYS ? N/A N/A 30463871
    509325 6mgl:A (1.5) BS01 BGC ? N/A N/A 30463871
    509326 6mgl:A (1.5) BS02 XYS ? N/A N/A 30463871
    509327 6mgl:A (1.5) BS03 XYS ? N/A N/A 30463871
    509328 6mgl:A (1.5) BS04 BGC ? N/A N/A 30463871
    509329 6mgl:A (1.5) BS05 BGC ? N/A N/A 30463871
    509330 6mgl:A (1.5) BS06 BGC ? N/A N/A 30463871
    509331 6mgl:A (1.5) BS07 XYS ? N/A N/A 30463871
    509332 6mgl:A (1.5) BS08 MG ? N/A N/A 30463871
    509333 6mgo:A (2.2) BS01 JQV 3.6.4.- GO:0000287 ... P68135 33938740
    509334 6mgo:A (2.2) BS02 ADP 3.6.4.- GO:0000287 ... P68135 33938740
    509335 6mgq:A (2.92) BS01 peptide 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509336 6mgq:A (2.92) BS02 ZN 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509337 6mgq:B (2.92) BS01 peptide 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509338 6mgq:B (2.92) BS02 ZN 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509339 6mgq:C (2.92) BS01 peptide 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509340 6mgq:C (2.92) BS02 ZN 3.4.11.- GO:0001525 ... Q9NZ08 34489420
    509341 6mgr:A (1.97) BS01 JQS N/A GO:0003824 ... N/A N/A
    509342 6mgr:B (1.97) BS01 JQS N/A GO:0003824 ... N/A N/A
    509343 6mgr:C (1.97) BS01 JQS N/A GO:0003824 ... N/A N/A
    509344 6mgr:D (1.97) BS01 JQS N/A GO:0003824 ... N/A N/A
    509345 6mgs:A (3.131) BS01 CO ? GO:0005737 ... Q83V25 31189654
    509346 6mgs:B (3.131) BS01 CO ? GO:0005737 ... Q83V25 31189654
    509347 6mgs:C (3.131) BS01 CO ? GO:0005737 ... Q83V25 31189654
    509348 6mgt:A (2.77) BS01 CO ? GO:0005737 ... Q83V25 31189654
    509349 6mgt:B (2.77) BS01 CO ? GO:0005737 ... Q83V25 31189654
    509350 6mgu:A (1.54) BS01 JQS 1.1.1.205 GO:0003824 ... A0A6L8P2U9 N/A
    509351 6mgu:B (1.54) BS01 JQS 1.1.1.205 GO:0003824 ... A0A6L8P2U9 N/A
    509352 6mgx:A (2.6) BS01 ZN 3.5.2.6 N/A G9JVE6 N/A
    509353 6mgx:A (2.6) BS02 ZN 3.5.2.6 N/A G9JVE6 N/A
    509354 6mgx:A (2.6) BS03 ZN 3.5.2.6 N/A G9JVE6 N/A
    509355 6mgx:B (2.6) BS01 ZN 3.5.2.6 N/A G9JVE6 N/A
    509356 6mgx:B (2.6) BS02 ZN 3.5.2.6 N/A G9JVE6 N/A
    509357 6mgx:B (2.6) BS03 ZN 3.5.2.6 N/A G9JVE6 N/A
    509358 6mgy:A (1.6) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509359 6mgy:A (1.6) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509360 6mgy:B (1.6) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509361 6mgy:B (1.6) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509362 6mgy:C (1.6) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509363 6mgy:C (1.6) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509364 6mgy:D (1.6) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509365 6mgy:D (1.6) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509366 6mgz:A (1.647) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509367 6mgz:A (1.647) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509368 6mgz:A (1.647) BS03 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509369 6mgz:B (1.647) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509370 6mgz:B (1.647) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509371 6mgz:B (1.647) BS03 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    509372 6mgz:B (1.647) BS04 MG 3.5.2.6 GO:0008270 ... C7C422 N/A
    509373 6mh0:A (1.65) BS01 ZN 3.5.2.6 N/A I3VKD5 N/A
    509374 6mh0:A (1.65) BS02 ZN 3.5.2.6 N/A I3VKD5 N/A
    509375 6mh0:B (1.65) BS01 ZN 3.5.2.6 N/A I3VKD5 N/A
    509376 6mh0:B (1.65) BS02 ZN 3.5.2.6 N/A I3VKD5 N/A
    509377 6mh1:A (1.6) BS01 JQP ? N/A O60885 30253095 MOAD: ic50=1.7uM
    BindingDB: Kd=1200nM, IC50=1700nM
    509378 6mh1:B (1.6) BS01 JQP ? N/A O60885 30253095 MOAD: ic50=1.7uM
    BindingDB: Kd=1200nM, IC50=1700nM
    509379 6mh5:A (2.887) BS01 FOM N/A GO:0008299 ... N/A 32497104
    509380 6mh5:B (2.887) BS01 FOM N/A GO:0008299 ... N/A 32497104
    509381 6mh6:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 31098022
    509382 6mh6:A (1.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 31098022
    509383 6mh7:A (1.74) BS01 JQY ? N/A O60885 30253095 MOAD: ic50=1.3uM
    BindingDB: IC50=1300nM, Kd=1800nM
    509384 6mh7:B (1.74) BS01 JQY ? N/A O60885 30253095 MOAD: ic50=1.3uM
    BindingDB: IC50=1300nM, Kd=1800nM
    509385 6mh8:A (4.2) BS01 ZMA ? GO:0001609 ... P0ABE7
    P29274
    31098022
    509386 6mha:A (1.497) BS01 peptide ? N/A P05205 N/A
    509387 6mhb:A (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509388 6mhb:B (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509389 6mhb:C (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509390 6mhb:D (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509391 6mhb:E (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509392 6mhb:F (2.75) BS01 JR7 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509393 6mhc:A (2.0) BS01 JRM 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509394 6mhc:B (2.0) BS01 JRM 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509395 6mhd:A (2.16) BS01 JRD 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509396 6mhd:B (2.16) BS01 JRD 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 30735370
    509397 6mhe:A (2.2) BS01 peptide ? GO:0000139 ... P08753 31363053
    509398 6mhe:A (2.2) BS02 GDP ? GO:0000139 ... P08753 31363053
    509399 6mhf:A (2.0) BS01 peptide ? GO:0000139 ... P08753 31363053
    509400 6mhf:A (2.0) BS02 GDP ? GO:0000139 ... P08753 31363053

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).