SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    509401 6mhi:A (1.35) BS01 YYZ ? GO:0006355 ... P16113 31117606
    509402 6mhm:B (2.743) BS01 JRY 3.5.1.-
    3.5.1.109
    3.5.1.23
    N/A Q13510 30525581
    509403 6mhm:D (2.743) BS01 JRY 3.5.1.-
    3.5.1.109
    3.5.1.23
    N/A Q13510 30525581
    509404 6mhn:A (1.67) BS01 YAZ ? GO:0006355 ... P16113 31117606
    509405 6mht:A (2.05) BS01 dna 2.1.1.37 GO:0003677 ... P05102 9207024
    509406 6mht:A (2.05) BS02 dna 2.1.1.37 GO:0003677 ... P05102 9207024
    509407 6mht:A (2.05) BS03 SAM 2.1.1.37 GO:0003677 ... P05102 9207024
    509408 6mhu:F (4.0) BS01 JSG ? GO:0005515 ... P0AF98 30894744
    509409 6mhu:G (4.0) BS01 JSG ? GO:0005515 ... P0ADC6 30894744
    509410 6mhz:A (4.1) BS01 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509411 6mhz:A (4.1) BS02 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509412 6mhz:B (4.1) BS01 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509413 6mhz:B (4.1) BS02 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509414 6mi0:A (2.73) BS01 HEM 1.14.13.70 GO:0004497 ... Q603T8 33031537
    509415 6mi1:A (2.3) BS01 U1Y 3.2.1.21 GO:0004553 ... Q9XEI3 31110237
    509416 6mi1:A (2.3) BS02 BGC 3.2.1.21 GO:0004553 ... Q9XEI3 31110237
    509417 6mi6:A (2.95) BS01 JSJ 2.7.13.3 GO:0016310 ... Q56310 30686862
    509418 6mi6:B (2.95) BS01 JSJ 2.7.13.3 GO:0016310 ... Q56310 30686862
    509419 6mi6:C (2.95) BS01 ADP 2.7.13.3 GO:0016310 ... Q56310 30686862
    509420 6mi6:D (2.95) BS01 ADP 2.7.13.3 GO:0016310 ... Q56310 30686862
    509421 6mi7:F (4.2) BS01 peptide ? GO:0005515 ... P0AF98 30894744
    509422 6mi7:G (4.2) BS01 peptide ? GO:0005515 ... P0ADC6 30894744
    509423 6mi8:A (4.3) BS01 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509424 6mi8:A (4.3) BS02 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509425 6mi8:B (4.3) BS01 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509426 6mi8:B (4.3) BS02 AOV 7.5.2.- GO:0005515 ... P0A9V1 30894744
    509427 6mia:A (1.399) BS01 1CE 3.5.2.6 GO:0008800 ... Q9L5C7 30942078
    509428 6mia:A (1.399) BS02 1CE 3.5.2.6 GO:0008800 ... Q9L5C7 30942078
    509429 6mia:B (1.399) BS01 1CE 3.5.2.6 GO:0008800 ... Q9L5C7 30942078
    509430 6mif:A (-1.00) BS01 ZN ? N/A P48059 30367047
    509431 6mif:A (-1.00) BS02 ZN ? N/A P48059 30367047
    509432 6mig:A (1.7) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509433 6mig:A (1.7) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509434 6mih:A (1.6) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509435 6mih:A (1.6) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509436 6mii:A (3.15) BS01 dna 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509437 6mii:A (3.15) BS02 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509438 6mii:A (3.15) BS03 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509439 6mii:A (3.15) BS04 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509440 6mii:B (3.15) BS01 dna 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509441 6mii:B (3.15) BS02 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509442 6mii:B (3.15) BS03 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509443 6mii:B (3.15) BS04 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509444 6mii:C (3.15) BS01 dna 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509445 6mii:C (3.15) BS02 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509446 6mii:C (3.15) BS03 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509447 6mii:C (3.15) BS04 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509448 6mii:D (3.15) BS01 dna 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509449 6mii:D (3.15) BS02 08T 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509450 6mii:D (3.15) BS03 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509451 6mii:D (3.15) BS04 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509452 6mii:E (3.15) BS01 dna 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509453 6mii:E (3.15) BS02 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509454 6mii:E (3.15) BS03 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509455 6mii:E (3.15) BS04 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509456 6mii:F (3.15) BS01 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509457 6mii:F (3.15) BS02 ADP 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509458 6mii:F (3.15) BS03 ZN 3.6.4.12 GO:0003677 ... Q9UXG1 31308367
    509459 6mij:A (1.955) BS01 GDP ? GO:0003746 ... D0C9P9
    D0CG85
    N/A
    509460 6mik:A (1.7) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509461 6mik:A (1.7) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 30792304
    509462 6mil:A (1.93) BS01 peptide ? N/A P42568 30385749
    509463 6mil:C (1.93) BS01 peptide ? N/A P42568 30385749
    509464 6mim:A (2.525) BS01 peptide ? N/A P42568 30385749
    509465 6mim:C (2.525) BS01 peptide ? N/A P42568 30385749
    509466 6min:A (1.9) BS01 peptide ? GO:0006355 ... P35189 30385749
    509467 6mio:A (1.85) BS01 peptide ? GO:0006355 ... P35189 30385749
    509468 6miq:A (1.75) BS01 peptide ? GO:0006355 ... P35189 30385749
    509469 6mis:A (1.98) BS01 E64 3.4.22.31 GO:0006508 ... P80884 31306685
    509470 6mis:B (1.98) BS01 E64 3.4.22.31 GO:0006508 ... P80884 31306685
    509471 6mit:B (3.2) BS01 NOV ? GO:0005524 ... A0A0H3CR83 30894747
    509472 6mit:E (3.2) BS01 NOV ? GO:0005524 ... A0A0H3CR83 30894747
    509473 6miu:A (1.9) BS01 ZN ? GO:0008270 ... Q13501 30349045
    509474 6miu:A (1.9) BS02 ZN ? GO:0008270 ... Q13501 30349045
    509475 6miu:B (1.9) BS01 ZN ? GO:0008270 ... Q13501 30349045
    509476 6miu:B (1.9) BS02 ZN ? GO:0008270 ... Q13501 30349045
    509477 6miv:A (2.05) BS01 FUC ? N/A P11609 30556652
    509478 6miv:A (2.05) BS02 JU1 ? N/A P11609 30556652
    509479 6miv:C (2.05) BS01 JU1 ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509480 6miy:A (2.75) BS01 FUC ? N/A P11609 30556652
    509481 6miy:A (2.75) BS02 JTV ? N/A P11609 30556652
    509482 6miy:C (2.75) BS01 JTV ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509483 6miy:E (2.75) BS01 FUC ? N/A P11609 30556652
    509484 6miy:E (2.75) BS02 JTV ? N/A P11609 30556652
    509485 6miy:G (2.75) BS01 JTV ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509486 6mj2:A (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    509487 6mj2:B (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    509488 6mj2:C (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    509489 6mj2:D (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    509490 6mj3:D (3.8) BS01 BMA ? N/A F6RL33 36131913
    509491 6mj4:A (2.0) BS01 FUC ? N/A P11609 30556652
    509492 6mj4:A (2.0) BS02 JTG ? N/A P11609 30556652
    509493 6mj4:C (2.0) BS01 JTG ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509494 6mj5:A (1.853) BS01 JTA 3.1.4.- GO:0005634 ... Q9NUW8 31199869
    509495 6mj5:B (1.853) BS01 JTA 3.1.4.- GO:0005634 ... Q9NUW8 31199869
    509496 6mj6:A (2.45) BS01 FUC ? N/A P11609 30556652
    509497 6mj6:A (2.45) BS02 JTM ? N/A P11609 30556652
    509498 6mj6:C (2.45) BS01 JTM ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509499 6mj7:A (1.412) BS01 ZN ? GO:0008270 ... Q13501 30349045
    509500 6mj7:A (1.412) BS02 ZN ? GO:0008270 ... Q13501 30349045
    509501 6mj7:A (1.412) BS03 ARG ? GO:0008270 ... Q13501 30349045
    509502 6mj8:A (3.03) BS01 peptide ? GO:0033551 ... Q6FVN3 31037469
    509503 6mj8:B (3.03) BS01 peptide ? GO:0033551 ... Q6FVN3 31037469
    509504 6mj8:B (3.03) BS02 peptide ? GO:0033551 ... Q6FVN3 31037469
    509505 6mja:A (2.35) BS01 FUC ? N/A P11609 30556652
    509506 6mja:A (2.35) BS02 JTJ ? N/A P11609 30556652
    509507 6mja:C (2.35) BS01 JTJ ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509508 6mjc:A (1.79) BS01 peptide ? GO:0033551 ... Q6FVN3 31037469
    509509 6mjf:A (2.198) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409 MOAD: Kd=6.88uM
    509510 6mjf:B (2.198) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409 MOAD: Kd=6.88uM
    509511 6mjf:C (2.198) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409 MOAD: Kd=6.88uM
    509512 6mjf:D (2.198) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409 MOAD: Kd=6.88uM
    509513 6mjf:F (2.198) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409 MOAD: Kd=6.88uM
    509514 6mjg:A (2.123) BS01 SAH 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409
    509515 6mjg:A (2.123) BS02 ZN 2.1.1.- GO:0008168 ... A0A4S8L4Q5 30204409
    509516 6mji:A (2.3) BS01 FUC ? N/A P11609 30556652
    509517 6mji:A (2.3) BS02 JTD ? N/A P11609 30556652
    509518 6mji:C (2.3) BS01 JTD ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509519 6mjj:A (1.93) BS01 FUC ? N/A P11609 30556652
    509520 6mjj:A (1.93) BS02 JU4 ? N/A P11609 30556652
    509521 6mjj:C (1.93) BS01 JU4 ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509522 6mjk:A (1.45) BS01 DUR 3.6.1.23 GO:0000287 ... A0A1Z0YU86 N/A
    509523 6mjl:B (2.5) BS01 peptide ? N/A P52293 32776146
    509524 6mjm:A (2.2) BS01 HEM 1.14.14.1 GO:0002933 ... P20815 30926609
    509525 6mjp:A (2.85) BS01 CA 3.6.3.- GO:0005524 ... O30650 30894747
    509526 6mjq:A (3.0) BS01 FUC ? N/A P11609 30556652
    509527 6mjq:A (3.0) BS02 JUD ? N/A P11609 30556652
    509528 6mjq:C (3.0) BS01 JUD ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509529 6mjq:E (3.0) BS01 JUD ? N/A P11609 30556652
    509530 6mjq:G (3.0) BS01 JUD ? GO:0002250 ... A0A0B4J1J9
    K7N5M3
    30556652
    509531 6mjr:A (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    509532 6mjr:A (2.012) BS02 REQ ? GO:0005507 ... P00282 30693338
    509533 6mjr:A (2.012) BS03 REQ ? GO:0005507 ... P00282 30693338
    509534 6mjr:A (2.012) BS04 REQ ? GO:0005507 ... P00282 30693338
    509535 6mjr:B (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    509536 6mjr:B (2.012) BS02 REQ ? GO:0005507 ... P00282 30693338
    509537 6mjr:C (2.012) BS01 REQ ? GO:0005507 ... P00282 30693338
    509538 6mjr:C (2.012) BS02 CU ? GO:0005507 ... P00282 30693338
    509539 6mjr:C (2.012) BS03 REQ ? GO:0005507 ... P00282 30693338
    509540 6mjr:D (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    509541 6mjr:D (2.012) BS02 REQ ? GO:0005507 ... P00282 30693338
    509542 6mjs:A (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    509543 6mjs:A (1.85) BS02 REQ ? GO:0005507 ... P00282 30693338
    509544 6mjs:A (1.85) BS03 REQ ? GO:0005507 ... P00282 30693338
    509545 6mjs:A (1.85) BS04 REQ ? GO:0005507 ... P00282 30693338
    509546 6mjs:B (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    509547 6mjs:B (1.85) BS02 REQ ? GO:0005507 ... P00282 30693338
    509548 6mjs:B (1.85) BS03 REQ ? GO:0005507 ... P00282 30693338
    509549 6mjs:B (1.85) BS04 REQ ? GO:0005507 ... P00282 30693338
    509550 6mjs:C (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    509551 6mjs:C (1.85) BS02 REQ ? GO:0005507 ... P00282 30693338
    509552 6mjs:D (1.85) BS01 REQ ? GO:0005507 ... P00282 30693338
    509553 6mjs:D (1.85) BS02 CU ? GO:0005507 ... P00282 30693338
    509554 6mjs:D (1.85) BS03 REQ ? GO:0005507 ... P00282 30693338
    509555 6mjt:A (1.893) BS01 CU ? GO:0005507 ... P00282 30693338
    509556 6mjt:A (1.893) BS02 REQ ? GO:0005507 ... P00282 30693338
    509557 6mjt:B (1.893) BS01 CU ? GO:0005507 ... P00282 30693338
    509558 6mjt:B (1.893) BS02 REQ ? GO:0005507 ... P00282 30693338
    509559 6mju:A (2.45) BS01 JUM 2.7.7.86 N/A Q8N884 31113940 MOAD: ic50=0.0275uM
    509560 6mju:A (2.45) BS02 ZN 2.7.7.86 N/A Q8N884 31113940
    509561 6mjw:A (2.405) BS01 ZN 2.7.7.86 N/A Q8N884 31113940
    509562 6mjw:A (2.405) BS02 JUJ 2.7.7.86 N/A Q8N884 31113940 MOAD: ic50=0.0102uM
    509563 6mjx:A (2.6) BS01 1SY 2.7.7.86 N/A Q8N884 31113940
    509564 6mjx:A (2.6) BS02 ZN 2.7.7.86 N/A Q8N884 31113940
    509565 6mjy:A (1.56) BS01 CPR 1.1.1.205 GO:0003824 ... G7CNL4 31757668
    509566 6mk0:A (3.005) BS01 MN ? GO:0001525 ... P06756 N/A
    509567 6mk0:A (3.005) BS02 MN ? GO:0001525 ... P06756 N/A
    509568 6mk0:A (3.005) BS03 MN ? GO:0001525 ... P06756 N/A
    509569 6mk0:A (3.005) BS04 MN ? GO:0001525 ... P06756 N/A
    509570 6mk0:A (3.005) BS05 MN ? GO:0001525 ... P06756 N/A
    509571 6mk0:A (3.005) BS06 JUY ? GO:0001525 ... P06756 N/A
    509572 6mk0:B (3.005) BS01 MN ? GO:0001618 ... P05106 N/A
    509573 6mk0:B (3.005) BS02 MN ? GO:0001618 ... P05106 N/A
    509574 6mk0:B (3.005) BS03 MN ? GO:0001618 ... P05106 N/A
    509575 6mk0:B (3.005) BS04 JUY ? GO:0001618 ... P05106 N/A
    509576 6mk2:A (3.35) BS01 JUV 2.3.1.140 GO:0016746 ... A0PDV5 31481469
    509577 6mk9:A (1.7) BS01 7O7 ? GO:0004190 ... A0A4P8EW36 N/A
    509578 6mk9:B (1.7) BS01 7O7 ? GO:0004190 ... A0A4P8EW36 N/A
    509579 6mke:A (2.05) BS01 FK5 5.2.1.8 GO:0003755 ... A0A2H4A315 N/A
    509580 6mke:A (2.05) BS02 FK5 5.2.1.8 GO:0003755 ... A0A2H4A315 N/A
    509581 6mke:B (2.05) BS01 FK5 5.2.1.8 GO:0003755 ... A0A2H4A315 N/A
    509582 6mke:C (2.05) BS01 FK5 5.2.1.8 GO:0003755 ... A0A2H4A315 N/A
    509583 6mke:D (2.05) BS01 FK5 5.2.1.8 GO:0003755 ... A0A2H4A315 N/A
    509584 6mkf:A (2.8) BS01 IM2 ? GO:0005886 ... A0A075Q0W3 30355734
    509585 6mkg:A (2.94) BS01 PNM ? GO:0005886 ... A0A075Q0W3 30355734
    509586 6mkh:A (2.62) BS01 IM2 ? GO:0005886 ... Q9K3C9 30355734
    509587 6mki:A (2.984) BS01 AI8 ? GO:0005886 ... Q9K3C9 30355734
    509588 6mkk:A (1.442) BS01 MG 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 30653918
    509589 6mkl:A (1.7) BS01 7OA ? GO:0004190 ... A0A4P8EW36 N/A
    509590 6mkl:B (1.7) BS01 7OA ? GO:0004190 ... A0A4P8EW36 N/A
    509591 6mkn:B (3.46) BS01 rna ? GO:0003735 ... P80371 31945376
    509592 6mkn:C (3.46) BS01 rna ? GO:0003676 ... P80372 31945376
    509593 6mkn:D (3.46) BS01 rna ? GO:0003723 ... P80373 31945376
    509594 6mkn:E (3.46) BS01 rna ? GO:0003723 ... Q5SHQ5 31945376
    509595 6mkn:F (3.46) BS01 rna ? GO:0003735 ... Q5SLP8 31945376
    509596 6mkn:G (3.46) BS01 rna ? GO:0000049 ... P17291 31945376
    509597 6mkn:H (3.46) BS01 rna ? GO:0003735 ... P0DOY9 31945376
    509598 6mkn:I (3.46) BS01 rna ? GO:0000049 ... P80374 31945376
    509599 6mkn:J (3.46) BS01 rna ? GO:0000049 ... Q5SHN7 31945376
    509600 6mkn:K (3.46) BS01 rna ? GO:0003735 ... P80376 31945376

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).