SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    509601 6mkn:L (3.46) BS01 rna ? GO:0000049 ... Q5SHN3 31945376
    509602 6mkn:M (3.46) BS01 rna ? GO:0000049 ... P80377 31945376
    509603 6mkn:N (3.46) BS01 rna ? GO:0003735 ... P0DOY6 31945376
    509604 6mkn:O (3.46) BS01 rna ? GO:0003735 ... Q5SJ76 31945376
    509605 6mkn:P (3.46) BS01 rna ? GO:0003735 ... Q5SJH3 31945376
    509606 6mkn:Q (3.46) BS01 rna ? GO:0003735 ... P0DOY7 31945376
    509607 6mkn:R (3.46) BS01 rna ? GO:0003735 ... Q5SLQ0 31945376
    509608 6mkn:S (3.46) BS01 rna ? GO:0000028 ... Q5SHP2 31945376
    509609 6mkn:T (3.46) BS01 rna ? GO:0003723 ... P80380 31945376
    509610 6mkq:A (1.9) BS01 NXL 3.5.2.6 GO:0008800 ... A0A0U3IB62 30782990
    509611 6mku:E (1.727) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=70nM
    509612 6mkv:A (2.107) BS01 RET ? GO:0001523 ... P50120 31557439
    509613 6mkv:B (2.107) BS01 RET ? GO:0001523 ... P50120 31557439
    509614 6mkv:B (2.107) BS02 RET ? GO:0001523 ... P50120 31557439
    509615 6mkv:C (2.107) BS01 RET ? GO:0001523 ... P50120 31557439
    509616 6mkv:D (2.107) BS01 RET ? GO:0001523 ... P50120 31557439
    509617 6mkv:D (2.107) BS02 RET ? GO:0001523 ... P50120 31557439
    509618 6mkw:A (2.32) BS01 HIS ? GO:0006865 ... P02911 31348608 MOAD: Kd=17uM
    509619 6ml1:A (1.9) BS01 peptide 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509620 6ml1:A (1.9) BS02 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509621 6ml1:A (1.9) BS03 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509622 6ml1:A (1.9) BS04 ZN 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509623 6ml1:B (1.9) BS01 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509624 6ml1:B (1.9) BS02 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509625 6ml1:B (1.9) BS03 ZN 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    509626 6ml2:A (1.874) BS01 dna ? N/A Q80X44 31226215
    509627 6ml2:A (1.874) BS02 dna ? N/A Q80X44 31226215
    509628 6ml2:A (1.874) BS03 ZN ? N/A Q80X44 31226215
    509629 6ml2:A (1.874) BS04 ZN ? N/A Q80X44 31226215
    509630 6ml2:A (1.874) BS05 ZN ? N/A Q80X44 31226215
    509631 6ml2:A (1.874) BS06 ZN ? N/A Q80X44 31226215
    509632 6ml2:A (1.874) BS07 ZN ? N/A Q80X44 31226215
    509633 6ml3:A (1.683) BS01 dna ? N/A Q80X44 31226215
    509634 6ml3:A (1.683) BS02 dna ? N/A Q80X44 31226215
    509635 6ml3:A (1.683) BS03 ZN ? N/A Q80X44 31226215
    509636 6ml3:A (1.683) BS04 ZN ? N/A Q80X44 31226215
    509637 6ml3:A (1.683) BS05 ZN ? N/A Q80X44 31226215
    509638 6ml3:A (1.683) BS06 ZN ? N/A Q80X44 31226215
    509639 6ml4:A (1.482) BS01 dna ? N/A Q80X44 31226215
    509640 6ml4:A (1.482) BS02 dna ? N/A Q80X44 31226215
    509641 6ml4:A (1.482) BS03 ZN ? N/A Q80X44 31226215
    509642 6ml4:A (1.482) BS04 ZN ? N/A Q80X44 31226215
    509643 6ml4:A (1.482) BS05 ZN ? N/A Q80X44 31226215
    509644 6ml4:A (1.482) BS06 ZN ? N/A Q80X44 31226215
    509645 6ml4:A (1.482) BS07 ZN ? N/A Q80X44 31226215
    509646 6ml5:A (1.65) BS01 dna ? N/A Q80X44 31226215
    509647 6ml5:A (1.65) BS02 dna ? N/A Q80X44 31226215
    509648 6ml5:A (1.65) BS03 ZN ? N/A Q80X44 31226215
    509649 6ml5:A (1.65) BS04 ZN ? N/A Q80X44 31226215
    509650 6ml5:A (1.65) BS05 ZN ? N/A Q80X44 31226215
    509651 6ml5:A (1.65) BS06 ZN ? N/A Q80X44 31226215
    509652 6ml5:A (1.65) BS07 ZN ? N/A Q80X44 31226215
    509653 6ml6:A (1.54) BS01 dna ? N/A Q80X44 31226215
    509654 6ml6:A (1.54) BS02 dna ? N/A Q80X44 31226215
    509655 6ml6:A (1.54) BS03 ZN ? N/A Q80X44 31226215
    509656 6ml6:A (1.54) BS04 ZN ? N/A Q80X44 31226215
    509657 6ml6:A (1.54) BS05 ZN ? N/A Q80X44 31226215
    509658 6ml6:A (1.54) BS06 ZN ? N/A Q80X44 31226215
    509659 6ml6:A (1.54) BS07 ZN ? N/A Q80X44 31226215
    509660 6ml7:A (1.75) BS01 dna ? N/A Q80X44 31226215
    509661 6ml7:A (1.75) BS02 dna ? N/A Q80X44 31226215
    509662 6ml7:A (1.75) BS03 ZN ? N/A Q80X44 31226215
    509663 6ml7:A (1.75) BS04 ZN ? N/A Q80X44 31226215
    509664 6ml7:A (1.75) BS05 ZN ? N/A Q80X44 31226215
    509665 6ml7:A (1.75) BS06 ZN ? N/A Q80X44 31226215
    509666 6ml7:A (1.75) BS07 ZN ? N/A Q80X44 31226215
    509667 6ml9:E (1.687) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=5uM
    509668 6mla:E (1.582) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=42uM
    509669 6mlb:A (2.15) BS01 RET ? GO:0001523 ... P50120 31557439
    509670 6mlb:B (2.15) BS01 RET ? GO:0001523 ... P50120 31557439
    509671 6mlb:C (2.15) BS01 RET ? GO:0001523 ... P50120 31557439
    509672 6mlb:D (2.15) BS01 RET ? GO:0001523 ... P50120 31557439
    509673 6mlc:A (1.8) BS01 peptide 2.1.1.364 N/A Q8NEZ4 30604749
    509674 6mlc:A (1.8) BS02 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509675 6mlc:A (1.8) BS03 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509676 6mlc:A (1.8) BS04 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509677 6mlc:A (1.8) BS05 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509678 6mlc:B (1.8) BS01 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509679 6mlc:B (1.8) BS02 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509680 6mlc:B (1.8) BS03 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509681 6mlc:B (1.8) BS04 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509682 6mlc:C (1.8) BS01 peptide 2.1.1.364 N/A Q8NEZ4 30604749
    509683 6mlc:C (1.8) BS02 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509684 6mlc:C (1.8) BS03 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509685 6mlc:C (1.8) BS04 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509686 6mlc:C (1.8) BS05 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509687 6mlc:D (1.8) BS01 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509688 6mlc:D (1.8) BS02 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509689 6mlc:D (1.8) BS03 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509690 6mlc:D (1.8) BS04 ZN 2.1.1.364 N/A Q8NEZ4 30604749
    509691 6mle:E (1.858) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=1nM
    509692 6mlf:A (1.75) BS01 JV4 N/A GO:0000287 ... N/A 31264865 MOAD: Ki=53uM
    509693 6mlf:A (1.75) BS02 MG N/A GO:0000287 ... N/A 31264865
    509694 6mlg:E (1.892) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=9uM
    509695 6mlh:A (1.65) BS01 GPM N/A GO:0000287 ... N/A 31264865 MOAD: Ki=213uM
    509696 6mlh:A (1.65) BS02 MG N/A GO:0000287 ... N/A 31264865
    509697 6mli:E (1.883) BS01 HIS ? GO:0006865 ... P02911 31348608 MOAD: Kd=3700uM
    509698 6mlj:A (1.6) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=55nM
    509699 6mlj:B (1.6) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=55nM
    509700 6mll:A (1.86) BS01 N1G 3.5.2.6 GO:0008800 ... Q9F663 30942078 MOAD: Ki=239uM
    509701 6mln:E (1.721) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=29nM
    509702 6mlo:E (1.717) BS01 ARG ? GO:0006865 ... P02911 31348608 MOAD: Kd=0.8uM
    509703 6mlp:E (1.485) BS01 HIS ? GO:0006865 ... P02911 31348608 MOAD: Kd=200uM
    509704 6mlq:A (4.2) BS01 MG 3.6.5.- GO:0000226 ... P02550 31031197
    509705 6mlq:A (4.2) BS02 GTP 3.6.5.- GO:0000226 ... P02550 31031197
    509706 6mlq:B (4.2) BS01 GDP ? GO:0000226 ... P02554 31031197
    509707 6mlq:B (4.2) BS02 TA1 ? GO:0000226 ... P02554 31031197 BindingDB: EC50=520nM
    509708 6mlq:C (4.2) BS01 ADP ? GO:0003777 ... Q2M1P5 31031197
    509709 6mlr:A (4.2) BS01 GTP 3.6.5.- GO:0000226 ... P02550 31031197
    509710 6mlr:B (4.2) BS01 GDP ? GO:0000226 ... P02554 31031197
    509711 6mlr:B (4.2) BS02 TA1 ? GO:0000226 ... P02554 31031197 BindingDB: EC50=520nM
    509712 6mlr:C (4.2) BS01 ANP ? GO:0003777 ... Q2M1P5 31031197
    509713 6mls:A (1.77) BS01 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    509714 6mls:A (1.77) BS02 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    509715 6mls:A (1.77) BS03 0JO 4.1.99.2 GO:0006520 ... P31013 N/A
    509716 6mls:B (1.77) BS01 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    509717 6mlt:A (1.9) BS01 CA ? GO:0003674 ... Q9KQW0 31439670
    509718 6mlt:A (1.9) BS02 CA ? GO:0003674 ... Q9KQW0 31439670
    509719 6mlw:A (1.9) BS01 MG N/A GO:0000287 ... N/A 31264865
    509720 6mlw:A (1.9) BS02 JVA N/A GO:0000287 ... N/A 31264865 MOAD: Ki=184uM
    509721 6mm1:A (1.9) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509722 6mm1:A (1.9) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509723 6mm1:A (1.9) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509724 6mm1:A (1.9) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509725 6mm1:B (1.9) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509726 6mm1:B (1.9) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509727 6mm1:B (1.9) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509728 6mm1:B (1.9) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509729 6mm1:C (1.9) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509730 6mm1:C (1.9) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509731 6mm1:C (1.9) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509732 6mm1:C (1.9) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509733 6mm1:D (1.9) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509734 6mm1:D (1.9) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509735 6mm1:D (1.9) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509736 6mm1:D (1.9) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 34278292
    509737 6mm2:A (1.04) BS01 ATP ? GO:0005524 ... B5II98 N/A
    509738 6mm2:A (1.04) BS02 CA ? GO:0005524 ... B5II98 N/A
    509739 6mm5:E (1.95) BS01 peptide 2.7.11.11 GO:0000122 ... P05132 N/A
    509740 6mm5:E (1.95) BS02 MG 2.7.11.11 GO:0000122 ... P05132 N/A
    509741 6mm5:E (1.95) BS03 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509742 6mm6:C (2.39) BS01 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509743 6mm6:E (2.39) BS01 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509744 6mm7:A (1.85) BS01 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509745 6mm7:D (1.85) BS01 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509746 6mm8:C (1.85) BS01 ANP 2.7.11.11 GO:0000122 ... P05132 N/A
    509747 6mmc:A (1.42) BS01 ADP ? GO:0005524 ... B5II98 N/A
    509748 6mme:A (1.9) BS01 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    509749 6mme:A (1.9) BS02 0JO 4.1.99.2 GO:0006520 ... P31013 N/A
    509750 6mme:B (1.9) BS01 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    509751 6mme:B (1.9) BS02 0JO 4.1.99.2 GO:0006520 ... P31013 N/A
    509752 6mmo:A (1.86) BS01 MG ? GO:0005524 ... B5II98 N/A
    509753 6mmo:A (1.86) BS02 MG ? GO:0005524 ... B5II98 N/A
    509754 6mmo:A (1.86) BS03 AMP ? GO:0005524 ... B5II98 N/A
    509755 6mmo:A (1.86) BS04 AMP ? GO:0005524 ... B5II98 N/A
    509756 6mmo:B (1.86) BS01 MG ? GO:0005524 ... B5II98 N/A
    509757 6mmo:B (1.86) BS02 AMP ? GO:0005524 ... B5II98 N/A
    509758 6mmo:B (1.86) BS03 MG ? GO:0005524 ... B5II98 N/A
    509759 6mmo:B (1.86) BS04 AMP ? GO:0005524 ... B5II98 N/A
    509760 6mmo:C (1.86) BS01 AMP ? GO:0005524 ... B5II98 N/A
    509761 6mmo:C (1.86) BS02 AMP ? GO:0005524 ... B5II98 N/A
    509762 6mmo:D (1.86) BS01 AMP ? GO:0005524 ... B5II98 N/A
    509763 6mmo:D (1.86) BS02 AMP ? GO:0005524 ... B5II98 N/A
    509764 6mmo:E (1.86) BS01 AMP ? GO:0005524 ... B5II98 N/A
    509765 6mmo:E (1.86) BS02 AMP ? GO:0005524 ... B5II98 N/A
    509766 6mmo:F (1.86) BS01 AMP ? GO:0005524 ... B5II98 N/A
    509767 6mmo:F (1.86) BS02 AMP ? GO:0005524 ... B5II98 N/A
    509768 6mmq:A (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509769 6mmq:A (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509770 6mmq:B (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509771 6mmq:B (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509772 6mmq:C (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509773 6mmq:C (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509774 6mmq:D (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509775 6mmq:D (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509776 6mmq:E (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509777 6mmq:E (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509778 6mmq:F (2.02) BS01 CMP ? GO:0005524 ... B5II98 N/A
    509779 6mmq:F (2.02) BS02 CMP ? GO:0005524 ... B5II98 N/A
    509780 6mn0:A (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509781 6mn0:A (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509782 6mn0:B (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509783 6mn0:B (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509784 6mn0:C (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509785 6mn0:C (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509786 6mn0:D (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509787 6mn0:D (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509788 6mn0:E (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509789 6mn0:E (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509790 6mn0:F (2.4) BS01 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509791 6mn0:F (2.4) BS02 ACO 2.3.1.81 GO:0008080 ... A0A059X981 35338238
    509792 6mn1:A (2.25) BS01 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509793 6mn1:A (2.25) BS02 LLL 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509794 6mn1:A (2.25) BS03 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509795 6mn1:B (2.25) BS01 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509796 6mn1:B (2.25) BS02 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509797 6mn1:B (2.25) BS03 LLL 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509798 6mn2:A (2.744) BS01 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509799 6mn2:A (2.744) BS02 SIS 2.3.1.81 GO:0008080 ... A0A059X981 N/A
    509800 6mn2:A (2.744) BS03 COA 2.3.1.81 GO:0008080 ... A0A059X981 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).