SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    510001 6mpv:A (7.17) BS01 peptide ? GO:0004308 ... Q8IFM8 30542156
    510002 6mpx:A (1.9) BS01 CL ? GO:0005201 ... P02462
    P08572
    30923125
    510003 6mpx:A (1.9) BS02 CL ? GO:0005201 ... P02462
    P08572
    30923125
    510004 6mpx:A (1.9) BS03 CL ? GO:0005201 ... P02462
    P08572
    30923125
    510005 6mpx:A (1.9) BS04 CL ? GO:0005201 ... P02462
    P08572
    30923125
    510006 6mpx:A (1.9) BS05 CL ? GO:0005201 ... P02462
    P08572
    30923125
    510007 6mpy:A (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510008 6mpy:A (2.0) BS02 OXY 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510009 6mpy:B (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510010 6mpy:B (2.0) BS02 OXY 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510011 6mpz:A (2.0) BS01 peptide N/A GO:0005524 ... N/A 30638446
    510012 6mpz:B (2.0) BS01 peptide N/A GO:0005524 ... N/A 30638446
    510013 6mpz:C (2.0) BS01 peptide N/A GO:0005524 ... N/A 30638446
    510014 6mpz:D (2.0) BS01 peptide N/A GO:0005524 ... N/A 30638446
    510015 6mq0:A (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510016 6mq0:A (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510017 6mq0:B (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510018 6mq0:B (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510019 6mq1:A (2.5) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510020 6mq1:B (2.5) BS01 HEM 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510021 6mq1:B (2.5) BS02 OXY 1.11.1.21 GO:0004096 ... Q939D2 N/A
    510022 6mq3:A (3.56915) BS01 J22 3.4.24.56 GO:0001618 ... P14735 31086331
    510023 6mq3:B (3.56915) BS01 J22 3.4.24.56 GO:0001618 ... P14735 31086331
    510024 6mq6:A (3.05) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30347977
    510025 6mq6:B (3.05) BS01 H7P 1.13.11.52 GO:0002376 ... P14902 30347977 BindingDB: IC50=1.1nM
    510026 6mq8:A (1.969) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 33258913
    510027 6mq8:A (1.969) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 33258913
    510028 6mq8:A (1.969) BS03 0KX 2.7.7.7 GO:0003684 ... Q9Y253 33258913
    510029 6mq8:A (1.969) BS04 MG 2.7.7.7 GO:0003684 ... Q9Y253 33258913
    510030 6mq8:A (1.969) BS05 MG 2.7.7.7 GO:0003684 ... Q9Y253 33258913
    510031 6mq9:A (1.86) BS01 GNP ? GO:0005525 ... Q8IYM1 32431830
    510032 6mq9:A (1.86) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510033 6mq9:A (1.86) BS03 GNP ? GO:0005525 ... Q8IYM1 32431830
    510034 6mq9:B (1.86) BS01 GNP ? GO:0005525 ... Q8IYM1 32431830
    510035 6mq9:B (1.86) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510036 6mq9:C (1.86) BS01 GNP ? GO:0005525 ... Q8IYM1 32431830
    510037 6mq9:C (1.86) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510038 6mq9:D (1.86) BS01 GNP ? GO:0005525 ... Q8IYM1 32431830
    510039 6mq9:D (1.86) BS02 GNP ? GO:0005525 ... Q8IYM1 32431830
    510040 6mq9:D (1.86) BS03 MG ? GO:0005525 ... Q8IYM1 32431830
    510041 6mqb:A (2.12) BS01 GNP ? GO:0005525 ... Q8IYM1 32431830
    510042 6mqb:A (2.12) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510043 6mqc:A (1.99) BS01 peptide N/A N/A N/A 31348886
    510044 6mqc:B (1.99) BS01 peptide N/A N/A N/A 31348886
    510045 6mqc:H (1.99) BS01 peptide N/A N/A N/A 31348886
    510046 6mqc:L (1.99) BS01 peptide N/A N/A N/A 31348886
    510047 6mqd:A (1.6) BS01 ROA ? GO:0004623 ... Q9I834 30679550
    510048 6mqd:B (1.6) BS01 ROA ? GO:0004623 ... Q9I834 30679550
    510049 6mqe:A (2.459) BS01 peptide N/A N/A N/A 31348886
    510050 6mqe:B (2.459) BS01 peptide N/A N/A N/A 31348886
    510051 6mqe:H (2.459) BS01 peptide N/A N/A N/A 31348886
    510052 6mqe:L (2.459) BS01 peptide N/A N/A N/A 31348886
    510053 6mqf:A (1.693) BS01 AIN ? GO:0004623 ... Q9I834 30679550
    510054 6mqf:B (1.693) BS01 AIN ? GO:0004623 ... Q9I834 30679550
    510055 6mqg:A (1.5) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31341022
    510056 6mqi:A (1.87) BS01 RET ? GO:0001972 ... P29373 30580520
    510057 6mqj:A (2.125) BS01 RET ? GO:0001972 ... P29373 30580520
    510058 6mqk:A (2.19) BS01 GDP ? GO:0005525 ... Q8IYM1 32431830
    510059 6mqk:A (2.19) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510060 6mqk:A (2.19) BS03 GDP ? GO:0005525 ... Q8IYM1 32431830
    510061 6mqk:B (2.19) BS01 GDP ? GO:0005525 ... Q8IYM1 32431830
    510062 6mqk:B (2.19) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510063 6mqk:C (2.19) BS01 GDP ? GO:0005525 ... Q8IYM1 32431830
    510064 6mqk:C (2.19) BS02 MG ? GO:0005525 ... Q8IYM1 32431830
    510065 6mqk:D (2.19) BS01 GDP ? GO:0005525 ... Q8IYM1 32431830
    510066 6mqk:D (2.19) BS02 GDP ? GO:0005525 ... Q8IYM1 32431830
    510067 6mql:A (2.17) BS01 GDP ? GO:0005525 ... Q8IYM1 N/A
    510068 6mqm:A (3.484) BS01 peptide N/A N/A N/A 31348886
    510069 6mqm:B (3.484) BS01 peptide N/A N/A N/A 31348886
    510070 6mqm:D (3.484) BS01 peptide N/A N/A N/A 31348886
    510071 6mqm:E (3.484) BS01 peptide N/A N/A N/A 31348886
    510072 6mqm:G (3.484) BS01 peptide N/A N/A N/A 31348886
    510073 6mqm:H (3.484) BS01 peptide N/A N/A N/A 31348886
    510074 6mqm:J (3.484) BS01 peptide N/A N/A N/A 31348886
    510075 6mqm:K (3.484) BS01 peptide N/A N/A N/A 31348886
    510076 6mqn:A (1.6) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31341022
    510077 6mqn:B (1.6) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31341022
    510078 6mqn:C (1.6) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31341022
    510079 6mqq:A (2.05) BS01 CQG 4.1.99.2 GO:0006520 ... P31013 N/A
    510080 6mqq:A (2.05) BS02 0JO 4.1.99.2 GO:0006520 ... P31013 N/A
    510081 6mqq:B (2.05) BS01 0JO 4.1.99.2 GO:0006520 ... P31013 N/A
    510082 6mqr:H (2.45) BS01 peptide N/A N/A N/A 31348886
    510083 6mqr:H (2.45) BS02 CA N/A N/A N/A 31348886
    510084 6mqr:L (2.45) BS01 peptide N/A N/A N/A 31348886
    510085 6mqr:L (2.45) BS02 CA N/A N/A N/A 31348886
    510086 6mqs:A (2.997) BS01 peptide N/A N/A N/A 31348886
    510087 6mqs:B (2.997) BS01 peptide N/A N/A N/A 31348886
    510088 6mqs:C (2.997) BS01 peptide N/A N/A N/A 31348886
    510089 6mqs:D (2.997) BS01 peptide N/A N/A N/A 31348886
    510090 6mqt:A (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510091 6mqt:B (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510092 6mqt:C (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510093 6mqt:D (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510094 6mqt:E (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510095 6mqt:F (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510096 6mqt:G (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510097 6mqt:H (1.498) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    510098 6mqw:A (2.09) BS01 RET ? GO:0001972 ... P29373 30580520
    510099 6mqx:A (2.01) BS01 RET ? GO:0001972 ... P29373 30580520
    510100 6mqy:A (1.9) BS01 RET ? GO:0001972 ... P29373 30580520
    510101 6mqz:A (2.07) BS01 RET ? GO:0001972 ... P29373 30580520
    510102 6mr0:A (2.649) BS01 RET ? GO:0001972 ... P29373 30580520
    510103 6mr1:A (1.35) BS01 CO 4.2.1.1 N/A Q8DKB5 30591587
    510104 6mr1:B (1.35) BS01 CO 4.2.1.1 N/A Q8DKB5 30591587
    510105 6mr2:A (2.404) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 30571100
    510106 6mr5:A (1.85) BS01 ZN ? N/A F8W4B7 30613344
    510107 6mr5:A (1.85) BS02 W45 ? N/A F8W4B7 30613344
    510108 6mr5:A (1.85) BS03 W45 ? N/A F8W4B7 30613344
    510109 6mr5:B (1.85) BS01 W45 ? N/A F8W4B7 30613344
    510110 6mr5:B (1.85) BS02 ZN ? N/A F8W4B7 30613344
    510111 6mr5:B (1.85) BS03 W45 ? N/A F8W4B7 30613344
    510112 6mr6:A (2.019) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 30571100
    510113 6mr7:A (2.144) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510114 6mr7:A (2.144) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510115 6mr7:A (2.144) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510116 6mr7:A (2.144) BS04 GKS 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510117 6mr7:A (2.144) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510118 6mr8:A (1.897) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510119 6mr8:A (1.897) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510120 6mr8:A (1.897) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510121 6mr8:A (1.897) BS04 GKS 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510122 6mr8:A (1.897) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    510123 6mr9:A (1.35) BS01 THG 1.5.1.3 GO:0004146 ... P0ABQ4 30868089
    510124 6mrc:A (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510125 6mrc:B (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510126 6mrc:C (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510127 6mrc:D (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510128 6mrc:E (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510129 6mrc:F (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510130 6mrc:G (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510131 6mrc:H (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510132 6mrc:I (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510133 6mrc:J (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510134 6mrc:K (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510135 6mrc:L (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510136 6mrc:M (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510137 6mrc:N (3.08) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510138 6mrd:A (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510139 6mrd:B (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510140 6mrd:C (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510141 6mrd:D (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510142 6mrd:E (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510143 6mrd:F (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510144 6mrd:G (3.82) BS01 ADP 5.6.1.7 GO:0001530 ... P10809 32317635
    510145 6mre:A (2.5) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 30571100
    510146 6mrg:A (2.77) BS01 JXV 3.1.1.-
    3.5.1.99
    GO:0000139 ... P97612 30289722
    510147 6mrg:B (2.77) BS01 JXV 3.1.1.-
    3.5.1.99
    GO:0000139 ... P97612 30289722
    510148 6mrg:C (2.77) BS01 JXV 3.1.1.-
    3.5.1.99
    GO:0000139 ... P97612 30289722
    510149 6mrg:D (2.77) BS01 JXV 3.1.1.-
    3.5.1.99
    GO:0000139 ... P97612 30289722
    510150 6mrh:A (2.02) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 30571100
    510151 6mri:A (2.62) BS01 PLP 2.8.1.7
    3.13.1.-
    4.4.1.16
    GO:0001887 ... P77444 30571100
    510152 6mrj:A (2.8) BS01 dna ? GO:0000976 ... O25896 N/A
    510153 6mrj:A (2.8) BS02 dna ? GO:0000976 ... O25896 N/A
    510154 6mrj:A (2.8) BS03 MG ? GO:0000976 ... O25896 N/A
    510155 6mrj:B (2.8) BS01 dna ? GO:0000976 ... O25896 N/A
    510156 6mrj:B (2.8) BS02 dna ? GO:0000976 ... O25896 N/A
    510157 6mrj:B (2.8) BS03 MG ? GO:0000976 ... O25896 N/A
    510158 6mrj:C (2.8) BS01 dna ? GO:0000976 ... O25896 N/A
    510159 6mrj:C (2.8) BS02 dna ? GO:0000976 ... O25896 N/A
    510160 6mrj:C (2.8) BS03 MG ? GO:0000976 ... O25896 N/A
    510161 6mrj:D (2.8) BS01 dna ? GO:0000976 ... O25896 N/A
    510162 6mrj:D (2.8) BS02 dna ? GO:0000976 ... O25896 N/A
    510163 6mrj:D (2.8) BS03 MG ? GO:0000976 ... O25896 N/A
    510164 6mrl:A (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    510165 6mrl:A (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    510166 6mrl:B (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    510167 6mrl:B (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    510168 6mrl:D (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    510169 6mrl:D (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    510170 6mrm:A (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    510171 6mrm:A (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    510172 6mrm:B (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    510173 6mrm:B (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    510174 6mrm:C (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    510175 6mrm:C (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    510176 6mro:A (1.6) BS01 SAH ? GO:0008168 ... Q8TNZ0 N/A
    510177 6mro:A (1.6) BS02 CA ? GO:0008168 ... Q8TNZ0 N/A
    510178 6mro:A (1.6) BS03 CA ? GO:0008168 ... Q8TNZ0 N/A
    510179 6mrq:A (1.288) BS01 CA 3.4.21.4 GO:0004175 ... P00760 32787139
    510180 6mrv:A (1.8) BS01 DAN ? GO:0004308 ... A0A4S2B4D9 31548686
    510181 6mrv:B (1.8) BS01 DAN ? GO:0004308 ... A0A4S2B4D9 31548686
    510182 6mry:F (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510183 6mry:G (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510184 6mry:H (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510185 6mry:I (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510186 6mry:I (2.3) BS02 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510187 6mry:J (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510188 6mry:K (2.3) BS01 I3C ? GO:0006952 ... A0A4V8H030 30794440
    510189 6ms1:A (1.35) BS01 peptide ? N/A Q14160 30659601
    510190 6ms1:A (1.35) BS02 peptide ? N/A Q14160 30659601
    510191 6ms1:B (1.35) BS01 peptide ? N/A Q14160 30659601
    510192 6ms2:A (2.494) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    510193 6ms3:A (1.95) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    510194 6ms3:B (1.95) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    510195 6ms4:B (2.001) BS01 ZN ? N/A O43583 30584092
    510196 6ms7:A (1.43) BS01 peptide ? GO:0003677 ... P37231 32190280
    510197 6ms7:A (1.43) BS02 V77 ? GO:0003677 ... P37231 32190280
    510198 6ms7:A (1.43) BS03 V77 ? GO:0003677 ... P37231 32190280
    510199 6ms8:A (1.9) BS01 NAR 5.5.1.6 GO:0009813 ... B7FJK3 N/A
    510200 6ms8:D (1.9) BS01 NAR 5.5.1.6 GO:0009813 ... B7FJK3 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).