SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    512001 6n58:I (3.78) BS01 1N7 2.7.7.6 GO:0000345 ... P0A8V2 31841111
    512002 6n58:J (3.78) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 31841111
    512003 6n58:J (3.78) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 31841111
    512004 6n58:J (3.78) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 31841111
    512005 6n58:J (3.78) BS04 1N7 2.7.7.6 GO:0000287 ... P0A8T7 31841111
    512006 6n58:J (3.78) BS05 1N7 2.7.7.6 GO:0000287 ... P0A8T7 31841111
    512007 6n58:L (3.78) BS01 1N7 ? GO:0000345 ... P00579 31841111
    512008 6n58:M (3.78) BS01 ZN ? GO:0008270 ... P41065 31841111
    512009 6n58:M (3.78) BS02 1N7 ? GO:0008270 ... P41065 31841111
    512010 6n59:A (1.02) BS01 402 1.12.7.2 GO:0005506 ... P29166 31816235
    512011 6n59:A (1.02) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512012 6n59:A (1.02) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512013 6n59:A (1.02) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512014 6n59:A (1.02) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512015 6n59:A (1.02) BS06 FES 1.12.7.2 GO:0005506 ... P29166 31816235
    512016 6n5c:A (1.95) BS01 ANP 2.7.4.24 GO:0000829 ... O43314 31391889
    512017 6n5c:A (1.95) BS02 MG 2.7.4.24 GO:0000829 ... O43314 31391889
    512018 6n5c:A (1.95) BS03 MG 2.7.4.24 GO:0000829 ... O43314 31391889
    512019 6n5c:A (1.95) BS04 MG 2.7.4.24 GO:0000829 ... O43314 31391889
    512020 6n5c:A (1.95) BS05 KDJ 2.7.4.24 GO:0000829 ... O43314 31391889
    512021 6n5f:A (1.93) BS01 KJ1 ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=138.8nM
    512022 6n5g:A (2.6) BS01 KDS ? GO:0003824 ... G0R7E2 30771398
    512023 6n5h:A (1.717) BS01 AUB ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=357.9nM
    512024 6n5u:A (2.66) BS01 CU1 ? N/A Q8VYP0 31348612
    512025 6n5u:B (2.66) BS01 CU1 ? N/A Q8VYP0 31348612
    512026 6n5u:C (2.66) BS01 CU1 ? N/A Q8VYP0 31348612
    512027 6n5v:A (2.549) BS01 KDY 4.3.3.2 GO:0005773 ... P68175 N/A
    512028 6n5v:B (2.549) BS01 KDY 4.3.3.2 GO:0005773 ... P68175 N/A
    512029 6n5w:C (2.15) BS01 peptide ? GO:0000086 ... P0DP23 30808708
    512030 6n5w:C (2.15) BS02 peptide ? GO:0000086 ... P0DP23 30808708
    512031 6n5w:C (2.15) BS03 CA ? GO:0000086 ... P0DP23 30808708
    512032 6n5w:C (2.15) BS04 CA ? GO:0000086 ... P0DP23 30808708
    512033 6n60:C (3.68) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 30626643
    512034 6n60:D (3.68) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512035 6n60:D (3.68) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512036 6n60:D (3.68) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512037 6n60:D (3.68) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512038 6n60:F (3.68) BS01 dna ? GO:0003677 ... Q0P6L9 30626643
    512039 6n60:F (3.68) BS02 dna ? GO:0003677 ... Q0P6L9 30626643
    512040 6n61:D (3.253) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512041 6n61:D (3.253) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512042 6n61:D (3.253) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512043 6n61:D (3.253) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512044 6n61:F (3.253) BS01 dna ? GO:0003677 ... Q0P6L9 30626643
    512045 6n61:F (3.253) BS02 dna ? GO:0003677 ... Q0P6L9 30626643
    512046 6n62:D (3.803) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512047 6n62:D (3.803) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512048 6n62:D (3.803) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 30626643
    512049 6n62:F (3.803) BS01 dna ? GO:0000345 ... P00579 30626643
    512050 6n63:A (1.72) BS01 GOA 1.16.3.1 GO:0004322 ... A0A0F5HNH9 31282860
    512051 6n63:A (1.72) BS02 FE 1.16.3.1 GO:0004322 ... A0A0F5HNH9 31282860
    512052 6n67:A (1.9) BS01 APC 6.5.1.3 N/A G0S6G2 31237564
    512053 6n69:A (2.0) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O35543 30858025
    512054 6n69:A (2.0) BS02 KDV 2.5.1.18
    5.3.99.2
    GO:0000287 ... O35543 30858025 MOAD: ic50=220000nM
    512055 6n69:B (2.0) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O35543 30858025
    512056 6n69:B (2.0) BS02 KDV 2.5.1.18
    5.3.99.2
    GO:0000287 ... O35543 30858025 MOAD: ic50=220000nM
    512057 6n6a:A (1.5) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512058 6n6b:A (2.3) BS01 CA 3.2.1.18 GO:0004308 ... A0A075ETL7 31406333
    512059 6n6c:A (1.619) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512060 6n6d:A (1.534) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512061 6n6e:A (1.578) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512062 6n6f:A (1.735) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512063 6n6g:A (2.018) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512064 6n6h:A (1.757) BS01 rna 3.1.15.- GO:0000175 ... Q9KV17 31225796
    512065 6n6i:A (1.431) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512066 6n6i:A (1.431) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512067 6n6i:B (1.431) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512068 6n6i:B (1.431) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512069 6n6j:A (1.317) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512070 6n6j:A (1.317) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512071 6n6j:B (1.317) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512072 6n6j:B (1.317) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512073 6n6k:A (1.418) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512074 6n6k:A (1.418) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512075 6n6k:B (1.418) BS01 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512076 6n6k:B (1.418) BS02 rna 3.1.15.- GO:0000175 ... Q9Y3B8 31225796
    512077 6n6n:B (1.877) BS01 MG 3.6.5.4 GO:0005525 ... P10121 31520694
    512078 6n6o:A (2.6) BS01 KE7 2.7.12.1 GO:0004672 ... P33981 30998356 BindingDB: IC50=0.700000nM
    512079 6n6p:A (1.95) BS01 402 1.12.7.2 GO:0005506 ... P29166 31816235
    512080 6n6p:A (1.95) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512081 6n6p:A (1.95) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512082 6n6p:A (1.95) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512083 6n6p:A (1.95) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 31816235
    512084 6n6p:A (1.95) BS06 FES 1.12.7.2 GO:0005506 ... P29166 31816235
    512085 6n6q:A (2.5) BS01 HEM ? GO:0004497 ... V5UQK0 31167942
    512086 6n6q:B (2.5) BS01 HEM ? GO:0004497 ... V5UQK0 31167942
    512087 6n6q:C (2.5) BS01 HEM ? GO:0004497 ... V5UQK0 31167942
    512088 6n6q:D (2.5) BS01 HEM ? GO:0004497 ... V5UQK0 31167942
    512089 6n6u:A (1.55) BS01 ID1 3.5.2.6 GO:0005886 ... Q9L4P2 30530607
    512090 6n6v:A (1.55) BS01 KE1 3.5.2.6 GO:0005886 ... Q9L4P2 30530607
    512091 6n6x:A (3.1) BS01 ID1 3.5.2.6 GO:0005886 ... Q9L4P2 30530607
    512092 6n6y:A (3.501) BS01 KE1 3.5.2.6 GO:0005886 ... Q9L4P2 30530607
    512093 6n77:A (1.64) BS01 KEJ 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.57nM
    512094 6n77:B (1.64) BS01 KEJ 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.57nM
    512095 6n78:A (1.83) BS01 KEP 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.21nM
    512096 6n79:A (2.27) BS01 KES 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.21nM
    512097 6n7a:A (1.33) BS01 KEV 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=4.3nM
    512098 6n7a:B (1.33) BS01 KEV 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=4.3nM
    512099 6n7b:A (1.81) BS01 KEY 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.6nM
    512100 6n7c:A (1.69) BS01 KF1 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.67nM
    512101 6n7c:B (1.69) BS01 KF1 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.67nM
    512102 6n7d:A (1.78) BS01 KF4 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.3nM
    512103 6n7e:A (3.5) BS01 ANP ? GO:0010960 ... Q9H8M5 31864811
    512104 6n7e:B (3.5) BS01 ANP ? GO:0010960 ... Q9H8M5 31864811
    512105 6n7e:C (3.5) BS01 ANP ? GO:0010960 ... Q9H8M5 31864811
    512106 6n7e:D (3.5) BS01 ANP ? GO:0010960 ... Q9H8M5 31864811
    512107 6n7e:D (3.5) BS02 MG ? GO:0010960 ... Q9H8M5 31864811
    512108 6n7f:A (1.9) BS01 FAD 1.8.1.7 GO:0000166 ... Q9A0E2 N/A
    512109 6n7f:A (1.9) BS02 RBF 1.8.1.7 GO:0000166 ... Q9A0E2 N/A
    512110 6n7f:B (1.9) BS01 FAD 1.8.1.7 GO:0000166 ... Q9A0E2 N/A
    512111 6n7f:C (1.9) BS01 FAD 1.8.1.7 GO:0000166 ... Q9A0E2 N/A
    512112 6n7f:D (1.9) BS01 FAD 1.8.1.7 GO:0000166 ... Q9A0E2 N/A
    512113 6n7g:A (6.8) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512114 6n7g:A (6.8) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512115 6n7g:A (6.8) BS03 CLR ? GO:0000122 ... Q13635 31127104
    512116 6n7g:B (6.8) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512117 6n7g:B (6.8) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512118 6n7g:C (6.8) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31127104
    512119 6n7g:C (6.8) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512120 6n7g:C (6.8) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512121 6n7g:D (6.8) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512122 6n7g:D (6.8) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512123 6n7g:D (6.8) BS03 CLR ? GO:0000122 ... Q13635 31127104
    512124 6n7g:E (6.8) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512125 6n7g:E (6.8) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512126 6n7g:F (6.8) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31127104
    512127 6n7g:F (6.8) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512128 6n7g:F (6.8) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512129 6n7h:A (3.6) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512130 6n7h:A (3.6) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512131 6n7h:A (3.6) BS03 CLR ? GO:0000122 ... Q13635 31127104
    512132 6n7h:B (3.6) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512133 6n7h:B (3.6) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512134 6n7h:C (3.6) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31127104
    512135 6n7h:C (3.6) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512136 6n7h:C (3.6) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512137 6n7i:A (3.2) BS01 peptide 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512138 6n7i:A (3.2) BS02 dna 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512139 6n7i:A (3.2) BS03 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512140 6n7i:B (3.2) BS01 dna 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512141 6n7i:B (3.2) BS02 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512142 6n7i:B (3.2) BS03 MG 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512143 6n7i:B (3.2) BS04 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512144 6n7i:C (3.2) BS01 dna 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512145 6n7i:C (3.2) BS02 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512146 6n7i:C (3.2) BS03 MG 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512147 6n7i:C (3.2) BS04 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512148 6n7i:D (3.2) BS01 dna 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512149 6n7i:D (3.2) BS02 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512150 6n7i:D (3.2) BS03 MG 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512151 6n7i:E (3.2) BS01 dna 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512152 6n7i:E (3.2) BS02 TTP 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512153 6n7i:E (3.2) BS03 MG 2.7.7.-
    3.6.4.12
    GO:0003677 ... P03692 30679383
    512154 6n7j:A (3.684) BS01 peptide N/A N/A N/A 30996276
    512155 6n7j:H (3.684) BS01 peptide N/A N/A N/A 30996276
    512156 6n7j:L (3.684) BS01 peptide N/A N/A N/A 30996276
    512157 6n7k:A (6.5) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512158 6n7k:A (6.5) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512159 6n7k:A (6.5) BS03 CLR ? GO:0000122 ... Q13635 31127104
    512160 6n7k:B (6.5) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512161 6n7k:B (6.5) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512162 6n7k:C (6.5) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31127104
    512163 6n7k:C (6.5) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512164 6n7k:C (6.5) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512165 6n7k:D (6.5) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512166 6n7k:D (6.5) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512167 6n7k:D (6.5) BS03 CLR ? GO:0000122 ... Q13635 31127104
    512168 6n7k:E (6.5) BS01 CLR ? GO:0000122 ... Q13635 31127104
    512169 6n7k:E (6.5) BS02 CLR ? GO:0000122 ... Q13635 31127104
    512170 6n7k:F (6.5) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31127104
    512171 6n7k:F (6.5) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512172 6n7k:F (6.5) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31127104
    512173 6n7l:A (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512174 6n7l:A (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512175 6n7l:A (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512176 6n7l:B (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512177 6n7l:B (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512178 6n7l:B (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512179 6n7l:C (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512180 6n7l:C (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512181 6n7l:C (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512182 6n7l:D (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512183 6n7l:D (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512184 6n7l:D (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512185 6n7l:E (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512186 6n7l:E (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512187 6n7l:E (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512188 6n7l:F (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512189 6n7l:F (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512190 6n7l:F (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512191 6n7l:G (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512192 6n7l:G (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512193 6n7l:G (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512194 6n7l:H (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512195 6n7l:H (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512196 6n7l:H (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512197 6n7l:I (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512198 6n7l:I (2.1) BS02 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512199 6n7l:I (2.1) BS03 ZN 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A
    512200 6n7l:J (2.1) BS01 NAD 1.1.1.1 GO:0000166 ... A0A077EGR8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).