SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    514401 6neq:J (3.32) BS01 rna ? GO:0005739 ... P82670 30677741
    514402 6neq:K (3.32) BS01 rna ? GO:0003735 ... P82911 30677741
    514403 6neq:L (3.32) BS01 rna ? GO:0003735 ... Q29RU1 30677741
    514404 6neq:N (3.32) BS01 rna ? GO:0003735 ... Q6B860 30677741
    514405 6neq:O (3.32) BS01 rna ? GO:0003735 ... P82913 30677741
    514406 6neq:P (3.32) BS01 rna ? GO:0003735 ... P82915 30677741
    514407 6neq:Q (3.32) BS01 rna ? GO:0003735 ... P82916 30677741
    514408 6neq:R (3.32) BS01 rna ? GO:0003735 ... P82917 30677741
    514409 6neq:U (3.32) BS01 rna ? GO:0003735 ... P82920 30677741
    514410 6neq:b (3.32) BS01 rna ? GO:0003735 ... Q2NL27 30677741
    514411 6neq:c (3.32) BS01 rna ? GO:0003735 ... P82669 30677741
    514412 6neq:d (3.32) BS01 rna ? GO:0003735 ... Q3SZ86 30677741
    514413 6neq:e (3.32) BS01 rna ? GO:0000049 ... Q32PI8 30677741
    514414 6neq:g (3.32) BS01 rna ? GO:0005761 ... A6QQP1 30677741
    514415 6neq:i (3.32) BS01 rna ? GO:0005739 ... P82926 30677741
    514416 6neq:j (3.32) BS01 rna ? GO:0003735 ... P82929 30677741
    514417 6neq:m (3.32) BS01 rna ? GO:0005654 ... Q2HJE8 30677741
    514418 6neq:n (3.32) BS01 rna ? GO:0005739 ... Q0VCJ1 30677741
    514419 6neq:p (3.32) BS01 rna ? GO:0003735 ... P82918 30677741
    514420 6neq:z (3.32) BS01 rna ? GO:0003743 ... Q9H2K0 30677741
    514421 6nes:A (1.75) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514422 6nes:B (1.75) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514423 6net:A (2.25) BS01 KJY 1.-.-.- GO:0004497 ... B8M9J8 31346489 MOAD: Kd=21uM
    514424 6net:A (2.25) BS02 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514425 6net:B (2.25) BS01 KJY 1.-.-.- GO:0004497 ... B8M9J8 31346489 MOAD: Kd=21uM
    514426 6net:B (2.25) BS02 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514427 6neu:A (2.3) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514428 6neu:B (2.3) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514429 6nev:A (2.303) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514430 6nev:B (2.303) BS01 FAD 1.-.-.- GO:0004497 ... B8M9J8 31346489
    514431 6new:A (2.5) BS01 ZN ? GO:0005085 ... P15498 N/A
    514432 6new:A (2.5) BS02 ZN ? GO:0005085 ... P15498 N/A
    514433 6nez:A (2.2) BS01 KJS ? N/A Q382J7 N/A
    514434 6nez:B (2.2) BS01 KJS ? N/A Q382J7 N/A
    514435 6nez:C (2.2) BS01 KJS ? N/A Q382J7 N/A
    514436 6nez:D (2.2) BS01 KJS ? N/A Q382J7 N/A
    514437 6nf0:A (2.7) BS01 NDP 3.1.3.108 GO:0003824 ... Q9UK39 31147539
    514438 6nf1:A (2.6) BS01 9JY ? GO:0005085 ... P15498 N/A
    514439 6nf1:A (2.6) BS02 ZN ? GO:0005085 ... P15498 N/A
    514440 6nf1:A (2.6) BS03 ZN ? GO:0005085 ... P15498 N/A
    514441 6nf2:F (3.7) BS01 MAN N/A N/A N/A 31348886
    514442 6nf2:K (3.7) BS01 MAN N/A N/A N/A 31348886
    514443 6nf2:T (3.7) BS01 MAN N/A N/A N/A 31348886
    514444 6nf4:A (2.98) BS01 Y01 N/A GO:0015252 ... N/A 31160780
    514445 6nf4:A (2.98) BS02 CLR N/A GO:0015252 ... N/A 31160780
    514446 6nf4:B (2.98) BS01 Y01 N/A GO:0015252 ... N/A 31160780
    514447 6nf4:B (2.98) BS02 CLR N/A GO:0015252 ... N/A 31160780
    514448 6nf6:A (3.32) BS01 Y01 N/A GO:0015252 ... N/A 31160780
    514449 6nf6:B (3.32) BS01 Y01 N/A GO:0015252 ... N/A 31160780
    514450 6nf7:A (2.9) BS01 peptide ? N/A P16391 31875536
    514451 6nf7:D (2.9) BS01 peptide ? N/A P16391 31875536
    514452 6nf7:G (2.9) BS01 peptide ? N/A P16391 31875536
    514453 6nf7:J (2.9) BS01 peptide ? N/A P16391 31875536
    514454 6nf7:M (2.9) BS01 peptide ? N/A P16391 31875536
    514455 6nf8:B (3.48) BS01 rna ? GO:0003735 ... P82923 30677741
    514456 6nf8:E (3.48) BS01 rna ? GO:0003723 ... Q2KID9 30677741
    514457 6nf8:F (3.48) BS01 rna ? GO:0003735 ... P82931 30677741
    514458 6nf8:G (3.48) BS01 rna ? GO:0000028 ... Q3T040 30677741
    514459 6nf8:I (3.48) BS01 rna ? GO:0003723 ... Q58DQ5 30677741
    514460 6nf8:J (3.48) BS01 rna ? GO:0005739 ... P82670 30677741
    514461 6nf8:K (3.48) BS01 rna ? GO:0003735 ... P82911 30677741
    514462 6nf8:L (3.48) BS01 rna ? GO:0003735 ... Q29RU1 30677741
    514463 6nf8:N (3.48) BS01 rna ? GO:0003735 ... Q6B860 30677741
    514464 6nf8:O (3.48) BS01 rna ? GO:0003735 ... P82913 30677741
    514465 6nf8:P (3.48) BS01 rna ? GO:0003735 ... P82915 30677741
    514466 6nf8:Q (3.48) BS01 rna ? GO:0003735 ... P82916 30677741
    514467 6nf8:R (3.48) BS01 rna ? GO:0003735 ... P82917 30677741
    514468 6nf8:U (3.48) BS01 rna ? GO:0003735 ... P82920 30677741
    514469 6nf8:b (3.48) BS01 rna ? GO:0003735 ... Q2NL27 30677741
    514470 6nf8:c (3.48) BS01 rna ? GO:0003735 ... P82669 30677741
    514471 6nf8:d (3.48) BS01 rna ? GO:0003735 ... Q3SZ86 30677741
    514472 6nf8:e (3.48) BS01 rna ? GO:0000049 ... Q32PI8 30677741
    514473 6nf8:g (3.48) BS01 rna ? GO:0005761 ... A6QQP1 30677741
    514474 6nf8:i (3.48) BS01 rna ? GO:0005739 ... P82926 30677741
    514475 6nf8:j (3.48) BS01 rna ? GO:0003735 ... P82929 30677741
    514476 6nf8:m (3.48) BS01 rna ? GO:0005654 ... Q2HJE8 30677741
    514477 6nf8:n (3.48) BS01 rna ? GO:0005739 ... Q0VCJ1 30677741
    514478 6nf8:p (3.48) BS01 rna ? GO:0003735 ... P82918 30677741
    514479 6nf8:z (3.48) BS01 rna ? GO:0003743 ... Q9H2K0 30677741
    514480 6nfa:A (2.7) BS01 ZN ? GO:0005085 ... P15498 N/A
    514481 6nfa:A (2.7) BS02 ZN ? GO:0005085 ... P15498 N/A
    514482 6nfa:A (2.7) BS03 9K1 ? GO:0005085 ... P15498 N/A
    514483 6nfe:A (1.75) BS01 HSX 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514484 6nfe:A (1.75) BS02 AMP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514485 6nfe:A (1.75) BS03 AMP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514486 6nfe:A (1.75) BS04 ADP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514487 6nfe:A (1.75) BS05 ADP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514488 6nfe:B (1.75) BS01 ADP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514489 6nfe:B (1.75) BS02 ADP 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514490 6nfe:B (1.75) BS03 HSX 2.7.6.1 GO:0000287 ... Q5ZY30 N/A
    514491 6nff:A (2.0) BS01 CA 3.4.14.11 GO:0004177 ... Q59485 31584010
    514492 6nff:A (2.0) BS02 PO4 3.4.14.11 GO:0004177 ... Q59485 31584010
    514493 6nff:A (2.0) BS03 PO4 3.4.14.11 GO:0004177 ... Q59485 31584010
    514494 6nfg:A (2.76) BS01 ZN 2.7.7.86 N/A Q8N884 N/A
    514495 6nfg:A (2.76) BS02 KKP 2.7.7.86 N/A Q8N884 N/A BindingDB: IC50=69000nM, Kd=78000nM
    514496 6nfg:B (2.76) BS01 ZN 2.7.7.86 N/A Q8N884 N/A
    514497 6nfg:B (2.76) BS02 KKP 2.7.7.86 N/A Q8N884 N/A BindingDB: IC50=69000nM, Kd=78000nM
    514498 6nfh:A (1.4) BS01 KLM 2.7.10.2 GO:0004672 ... Q06187 30817167
    514499 6nfi:A (2.41) BS01 KLP 2.7.10.2 GO:0004672 ... Q06187 30817167
    514500 6nfj:A (3.19) BS01 peptide ? GO:0004553 ... Q86Z14 30944224
    514501 6nfj:D (3.19) BS01 peptide ? GO:0004553 ... Q86Z14 30944224
    514502 6nfl:A (1.731) BS01 L60 3.5.4.38 GO:0003824 ... Q9UH17 N/A
    514503 6nfl:A (1.731) BS02 71O 3.5.4.38 GO:0003824 ... Q9UH17 N/A
    514504 6nfn:A (2.63) BS01 BCG N/A N/A N/A 31702583
    514505 6nfn:B (2.63) BS01 BCG N/A N/A N/A 31702583
    514506 6nfn:C (2.63) BS01 BCG N/A N/A N/A 31702583
    514507 6nfn:D (2.63) BS01 BCG N/A N/A N/A 31702583
    514508 6nfn:E (2.63) BS01 BCG N/A N/A N/A 31702583
    514509 6nfn:F (2.63) BS01 BCG N/A N/A N/A 31702583
    514510 6nfn:H (2.63) BS01 BCG N/A N/A N/A 31702583
    514511 6nfn:I (2.63) BS01 BCG N/A N/A N/A 31702583
    514512 6nfn:J (2.63) BS01 BCG N/A N/A N/A 31702583
    514513 6nfn:L (2.63) BS01 BCG N/A N/A N/A 31702583
    514514 6nfn:M (2.63) BS01 BCG N/A N/A N/A 31702583
    514515 6nfn:N (2.63) BS01 BCG N/A N/A N/A 31702583
    514516 6nfn:O (2.63) BS01 BCG N/A N/A N/A 31702583
    514517 6nfn:P (2.63) BS01 BCG N/A N/A N/A 31702583
    514518 6nfn:Q (2.63) BS01 BCG N/A N/A N/A 31702583
    514519 6nfn:R (2.63) BS01 BCG N/A N/A N/A 31702583
    514520 6nfo:A (2.93) BS01 ZN 2.7.7.86 N/A Q8N884 N/A
    514521 6nfo:A (2.93) BS02 KKM 2.7.7.86 N/A Q8N884 N/A BindingDB: IC50=8100nM, Kd=2700nM
    514522 6nfo:B (2.93) BS01 ZN 2.7.7.86 N/A Q8N884 N/A
    514523 6nfo:B (2.93) BS02 KKM 2.7.7.86 N/A Q8N884 N/A BindingDB: IC50=8100nM, Kd=2700nM
    514524 6nfp:A (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514525 6nfp:A (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514526 6nfp:B (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514527 6nfp:B (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514528 6nfp:C (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514529 6nfp:C (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514530 6nfp:D (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514531 6nfp:D (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514532 6nfp:D (1.7) BS03 GOA 3.5.3.1 GO:0000050 ... P39138 N/A
    514533 6nfp:E (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514534 6nfp:E (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514535 6nfp:F (1.7) BS01 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514536 6nfp:F (1.7) BS02 MG 3.5.3.1 GO:0000050 ... P39138 N/A
    514537 6nfp:F (1.7) BS03 GOA 3.5.3.1 GO:0000050 ... P39138 N/A
    514538 6nfq:A (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    514539 6nfq:B (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    514540 6nfq:C (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    514541 6nft:A (1.65) BS01 ZN 3.4.19.12 GO:0008270 ... P45974 31663737
    514542 6nft:A (1.65) BS02 KKG 3.4.19.12 GO:0008270 ... P45974 31663737 BindingDB: Kd=220000nM
    514543 6nft:B (1.65) BS01 ZN 3.4.19.12 GO:0008270 ... P45974 31663737
    514544 6nft:B (1.65) BS02 KKG 3.4.19.12 GO:0008270 ... P45974 31663737 BindingDB: Kd=220000nM
    514545 6nfy:A (2.17) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Kd=16nM
    BindingDB: Kd=16nM
    514546 6nfy:B (2.17) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Kd=16nM
    BindingDB: Kd=16nM
    514547 6nfz:A (2.966) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 BindingDB: Kd=16nM
    514548 6nfz:B (2.966) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 BindingDB: Kd=16nM
    514549 6ng0:A (2.05) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Ki=10nM
    BindingDB: Kd=16nM
    514550 6ng0:B (2.05) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Ki=10nM
    BindingDB: Kd=16nM
    514551 6ng1:A (2.15) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514552 6ng1:A (2.15) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514553 6ng1:A (2.15) BS03 KLY 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=58nM
    BindingDB: Ki=58nM
    514554 6ng1:A (2.15) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514555 6ng1:A (2.15) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514556 6ng1:B (2.15) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514557 6ng1:B (2.15) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514558 6ng1:B (2.15) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514559 6ng1:B (2.15) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514560 6ng1:B (2.15) BS05 KLY 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=58nM
    BindingDB: Ki=58nM
    514561 6ng2:A (1.93) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514562 6ng2:A (1.93) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514563 6ng2:A (1.93) BS03 KM7 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=124nM
    BindingDB: Ki=124nM
    514564 6ng2:A (1.93) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514565 6ng2:A (1.93) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514566 6ng2:B (1.93) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514567 6ng2:B (1.93) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514568 6ng2:B (1.93) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514569 6ng2:B (1.93) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514570 6ng2:B (1.93) BS05 KM7 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=124nM
    BindingDB: Ki=124nM
    514571 6ng4:A (1.776) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514572 6ng4:A (1.776) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514573 6ng4:A (1.776) BS03 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514574 6ng4:A (1.776) BS04 KMA 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=68nM
    BindingDB: Ki=68nM
    514575 6ng4:A (1.776) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514576 6ng4:B (1.776) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514577 6ng4:B (1.776) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514578 6ng4:B (1.776) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514579 6ng4:B (1.776) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514580 6ng4:B (1.776) BS05 KMA 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=68nM
    BindingDB: Ki=68nM
    514581 6ng5:A (1.96) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514582 6ng5:A (1.96) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514583 6ng5:A (1.96) BS03 KMD 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=52nM
    BindingDB: Ki=52nM
    514584 6ng5:A (1.96) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514585 6ng5:A (1.96) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514586 6ng5:B (1.96) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514587 6ng5:B (1.96) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514588 6ng5:B (1.96) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514589 6ng5:B (1.96) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514590 6ng5:B (1.96) BS05 KMD 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=52nM
    BindingDB: Ki=52nM
    514591 6ng6:A (2.044) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514592 6ng6:A (2.044) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514593 6ng6:A (2.044) BS03 KL4 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=59nM
    BindingDB: Ki=59nM
    514594 6ng6:A (2.044) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514595 6ng6:A (2.044) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514596 6ng6:B (2.044) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514597 6ng6:B (2.044) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 30802056
    514598 6ng6:B (2.044) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 30802056
    514599 6ng6:B (2.044) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 30802056
    514600 6ng6:B (2.044) BS05 KL4 1.14.13.39 GO:0004517 ... P29475 30802056 MOAD: Ki=59nM
    BindingDB: Ki=59nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).