SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    515801 6nmf:F (2.8) BS01 ZN ? GO:0005740 ... P00428 30808749
    515802 6nmf:J (2.8) BS01 DMU ? GO:0006123 ... P07470 30808749
    515803 6nmf:M (2.8) BS01 DMU ? GO:0006123 ... P10175 30808749
    515804 6nmf:N (2.8) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515805 6nmf:N (2.8) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515806 6nmf:N (2.8) BS03 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    515807 6nmf:N (2.8) BS04 MG 7.1.1.9 GO:0004129 ... P00396 30808749
    515808 6nmf:O (2.8) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 30808749
    515809 6nmf:O (2.8) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 30808749
    515810 6nmf:P (2.8) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 30808749
    515811 6nmf:Q (2.8) BS01 DMU ? GO:0006123 ... P00423 30808749
    515812 6nmf:S (2.8) BS01 ZN ? GO:0005740 ... P00428 30808749
    515813 6nmf:W (2.8) BS01 DMU ? GO:0006123 ... P07470 30808749
    515814 6nmf:Z (2.8) BS01 DMU ? GO:0006123 ... P10175 30808749
    515815 6nmi:B (3.7) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 30860024
    515816 6nmi:E (3.7) BS01 ZN ? GO:0000439 ... Q13888 30860024
    515817 6nmi:E (3.7) BS02 ZN ? GO:0000439 ... Q13888 30860024
    515818 6nmi:F (3.7) BS01 ZN ? GO:0000438 ... Q13889 30860024
    515819 6nmi:H (3.7) BS01 ZN ? GO:0000082 ... P51948 30860024
    515820 6nmk:A (1.94) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515821 6nmk:B (1.94) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515822 6nml:A (2.0) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515823 6nml:A (2.0) BS02 APC ? GO:0000166 ... Q57514 N/A
    515824 6nml:A (2.0) BS03 MG ? GO:0000166 ... Q57514 N/A
    515825 6nml:A (2.0) BS04 MG ? GO:0000166 ... Q57514 N/A
    515826 6nml:A (2.0) BS05 NMY ? GO:0000166 ... Q57514 N/A
    515827 6nml:A (2.0) BS06 APC ? GO:0000166 ... Q57514 N/A
    515828 6nml:B (2.0) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515829 6nml:B (2.0) BS02 NMY ? GO:0000166 ... Q57514 N/A
    515830 6nml:B (2.0) BS03 APC ? GO:0000166 ... Q57514 N/A
    515831 6nml:B (2.0) BS04 MG ? GO:0000166 ... Q57514 N/A
    515832 6nml:B (2.0) BS05 MG ? GO:0000166 ... Q57514 N/A
    515833 6nmm:A (2.5) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515834 6nmm:A (2.5) BS02 A ? GO:0000166 ... Q57514 N/A
    515835 6nmm:A (2.5) BS03 MG ? GO:0000166 ... Q57514 N/A
    515836 6nmm:A (2.5) BS04 MG ? GO:0000166 ... Q57514 N/A
    515837 6nmm:A (2.5) BS05 NMY ? GO:0000166 ... Q57514 N/A
    515838 6nmm:A (2.5) BS06 A ? GO:0000166 ... Q57514 N/A
    515839 6nmm:B (2.5) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515840 6nmm:B (2.5) BS02 A ? GO:0000166 ... Q57514 N/A
    515841 6nmm:B (2.5) BS03 MG ? GO:0000166 ... Q57514 N/A
    515842 6nmm:B (2.5) BS04 MG ? GO:0000166 ... Q57514 N/A
    515843 6nmm:C (2.5) BS01 A ? GO:0000166 ... Q57514 N/A
    515844 6nmm:C (2.5) BS02 NMY ? GO:0000166 ... Q57514 N/A
    515845 6nmm:C (2.5) BS03 A ? GO:0000166 ... Q57514 N/A
    515846 6nmm:C (2.5) BS04 MG ? GO:0000166 ... Q57514 N/A
    515847 6nmm:C (2.5) BS05 MG ? GO:0000166 ... Q57514 N/A
    515848 6nmm:C (2.5) BS06 NMY ? GO:0000166 ... Q57514 N/A
    515849 6nmm:C (2.5) BS07 A ? GO:0000166 ... Q57514 N/A
    515850 6nmm:D (2.5) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515851 6nmm:D (2.5) BS02 A ? GO:0000166 ... Q57514 N/A
    515852 6nmm:D (2.5) BS03 MG ? GO:0000166 ... Q57514 N/A
    515853 6nmm:D (2.5) BS04 MG ? GO:0000166 ... Q57514 N/A
    515854 6nmn:A (1.8) BS01 NMY ? GO:0000166 ... Q57514 N/A
    515855 6nmn:A (1.8) BS02 A ? GO:0000166 ... Q57514 N/A
    515856 6nmn:A (1.8) BS03 MG ? GO:0000166 ... Q57514 N/A
    515857 6nmn:A (1.8) BS04 NMY ? GO:0000166 ... Q57514 N/A
    515858 6nmn:A (1.8) BS05 A ? GO:0000166 ... Q57514 N/A
    515859 6nmn:B (1.8) BS01 A ? GO:0000166 ... Q57514 N/A
    515860 6nmn:B (1.8) BS02 NMY ? GO:0000166 ... Q57514 N/A
    515861 6nmn:B (1.8) BS03 A ? GO:0000166 ... Q57514 N/A
    515862 6nmo:A (1.45) BS01 ZN 4.6.1.12 GO:0008299 ... Q3JRA0 N/A
    515863 6nmo:A (1.45) BS02 QMS 4.6.1.12 GO:0008299 ... Q3JRA0 N/A
    515864 6nmo:B (1.45) BS01 ZN 4.6.1.12 GO:0008299 ... Q3JRA0 N/A
    515865 6nmo:C (1.45) BS01 ZN 4.6.1.12 GO:0008299 ... Q3JRA0 N/A
    515866 6nmo:C (1.45) BS02 QMS 4.6.1.12 GO:0008299 ... Q3JRA0 N/A
    515867 6nmp:A (2.9) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    515868 6nmp:A (2.9) BS02 MG 7.1.1.9 GO:0004129 ... P00396 30808749
    515869 6nmp:A (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515870 6nmp:A (2.9) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515871 6nmp:B (2.9) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 30808749
    515872 6nmp:C (2.9) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 30808749
    515873 6nmp:F (2.9) BS01 ZN ? GO:0005740 ... P00428 30808749
    515874 6nmp:M (2.9) BS01 DMU ? GO:0006123 ... P10175 30808749
    515875 6nmp:N (2.9) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    515876 6nmp:N (2.9) BS02 MG 7.1.1.9 GO:0004129 ... P00396 30808749
    515877 6nmp:N (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515878 6nmp:N (2.9) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 30808749
    515879 6nmp:O (2.9) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 30808749
    515880 6nmp:Q (2.9) BS01 DMU ? GO:0006123 ... P00423 30808749
    515881 6nmp:S (2.9) BS01 ZN ? GO:0005740 ... P00428 30808749
    515882 6nmp:Z (2.9) BS01 DMU ? GO:0006123 ... P10175 30808749
    515883 6nmq:A (1.58) BS01 FE2 1.14.11.29 GO:0005506 ... Q9GZT9 31179408
    515884 6nmq:A (1.58) BS02 KU1 1.14.11.29 GO:0005506 ... Q9GZT9 31179408 MOAD: ic50=0.00000001M
    515885 6nmx:A (1.971) BS01 LJS 4.2.3.1 GO:0003941 ... A8HUA2 30830751
    515886 6nmx:B (1.971) BS01 LJS 4.2.3.1 GO:0003941 ... A8HUA2 30830751
    515887 6nmx:C (1.971) BS01 LJS 4.2.3.1 GO:0003941 ... A8HUA2 30830751
    515888 6nmx:D (1.971) BS01 LJS 4.2.3.1 GO:0003941 ... A8HUA2 30830751
    515889 6nmz:A (2.4) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515890 6nmz:A (2.4) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515891 6nmz:B (2.4) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515892 6nmz:B (2.4) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515893 6nmz:C (2.4) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515894 6nmz:C (2.4) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515895 6nmz:D (2.4) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515896 6nmz:D (2.4) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515897 6nn0:A (2.343) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515898 6nn0:A (2.343) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515899 6nn0:B (2.343) BS01 CTN 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515900 6nn0:B (2.343) BS02 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515901 6nn0:B (2.343) BS03 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515902 6nn0:C (2.343) BS01 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515903 6nn0:C (2.343) BS02 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515904 6nn0:D (2.343) BS01 CTN 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515905 6nn0:D (2.343) BS02 KSJ 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515906 6nn0:D (2.343) BS03 KSP 6.3.3.3 GO:0000287 ... P9WPQ5 N/A
    515907 6nn1:A (1.5) BS01 MG N/A GO:0000287 ... N/A 31041362
    515908 6nn2:A (1.44) BS01 CA N/A GO:0000287 ... N/A 31041362
    515909 6nn4:A (2.15) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 31204694
    515910 6nn4:A (2.15) BS02 PEP 2.7.1.40 GO:0000287 ... P30613 31204694
    515911 6nn4:B (2.15) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 31204694
    515912 6nn4:B (2.15) BS02 PEP 2.7.1.40 GO:0000287 ... P30613 31204694
    515913 6nn4:C (2.15) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 31204694
    515914 6nn4:C (2.15) BS02 PEP 2.7.1.40 GO:0000287 ... P30613 31204694
    515915 6nn4:D (2.15) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 31204694
    515916 6nn4:D (2.15) BS02 PEP 2.7.1.40 GO:0000287 ... P30613 31204694
    515917 6nn6:A (3.9) BS01 dna ? GO:0000786 ... P84233 30759380
    515918 6nn6:A (3.9) BS02 dna ? GO:0000786 ... P84233 30759380
    515919 6nn6:B (3.9) BS01 dna ? GO:0000786 ... P62799 30759380
    515920 6nn6:B (3.9) BS02 dna ? GO:0000786 ... P62799 30759380
    515921 6nn6:C (3.9) BS01 dna ? GO:0000786 ... P06897 30759380
    515922 6nn6:C (3.9) BS02 dna ? GO:0000786 ... P06897 30759380
    515923 6nn6:D (3.9) BS01 dna ? GO:0000786 ... P02281 30759380
    515924 6nn6:D (3.9) BS02 dna ? GO:0000786 ... P02281 30759380
    515925 6nn6:E (3.9) BS01 dna ? GO:0000786 ... P84233 30759380
    515926 6nn6:E (3.9) BS02 dna ? GO:0000786 ... P84233 30759380
    515927 6nn6:F (3.9) BS01 dna ? GO:0000786 ... P62799 30759380
    515928 6nn6:G (3.9) BS01 dna ? GO:0000786 ... P06897 30759380
    515929 6nn6:G (3.9) BS02 dna ? GO:0000786 ... P06897 30759380
    515930 6nn6:H (3.9) BS01 dna ? GO:0000786 ... P02281 30759380
    515931 6nn9:A (2.3) BS01 CA 3.2.1.18 GO:0004308 ... P03472 1920429
    515932 6nna:A (2.26) BS01 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    N/A P49327 30803804
    515933 6nna:A (2.26) BS02 KUA 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    N/A P49327 30803804 BindingDB: IC50=101nM
    515934 6nna:B (2.26) BS01 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    N/A P49327 30803804
    515935 6nna:B (2.26) BS02 KUA 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    N/A P49327 30803804 BindingDB: IC50=101nM
    515936 6nnc:A (1.8) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515937 6nnc:A (1.8) BS02 LYA 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515938 6nnc:B (1.8) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515939 6nnc:B (1.8) BS02 LYA 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515940 6nnd:A (1.7) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515941 6nnd:A (1.7) BS02 CO 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515942 6nnd:A (1.7) BS03 DHF 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515943 6nnd:B (1.7) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515944 6nnd:B (1.7) BS02 DHF 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515945 6nne:A (1.595) BS01 NDP 1.5.1.3 GO:0000166 ... A5U6B6 31282477
    515946 6nne:A (1.595) BS02 KUP 1.5.1.3 GO:0000166 ... A5U6B6 31282477 MOAD: Kd=2.2uM
    515947 6nne:B (1.595) BS01 CO 1.5.1.3 GO:0000166 ... A5U6B6 31282477
    515948 6nne:B (1.595) BS02 NDP 1.5.1.3 GO:0000166 ... A5U6B6 31282477
    515949 6nne:B (1.595) BS03 KUP 1.5.1.3 GO:0000166 ... A5U6B6 31282477 MOAD: Kd=2.2uM
    515950 6nnf:D (2.762) BS01 BMA N/A N/A N/A 30760721
    515951 6nnf:D (2.762) BS02 MAN N/A N/A N/A 30760721
    515952 6nnf:D (2.762) BS03 MAN N/A N/A N/A 30760721
    515953 6nnf:H (2.762) BS01 MAN N/A N/A N/A 30760721
    515954 6nnf:L (2.762) BS01 MAN N/A N/A N/A 30760721
    515955 6nnf:L (2.762) BS02 MAN N/A N/A N/A 30760721
    515956 6nng:A (2.397) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 31043459
    515957 6nng:A (2.397) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31043459
    515958 6nng:A (2.397) BS03 DJ9 3.6.5.- GO:0000226 ... Q2XVP4 31043459
    515959 6nng:B (2.397) BS01 GDP ? GO:0000226 ... P02554 31043459
    515960 6nng:B (2.397) BS02 DJ9 ? GO:0000226 ... P02554 31043459
    515961 6nng:C (2.397) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 31043459
    515962 6nng:C (2.397) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31043459
    515963 6nng:D (2.397) BS01 GTP ? GO:0000226 ... P02554 31043459
    515964 6nng:F (2.397) BS01 ACP N/A GO:0036211 ... N/A 31043459
    515965 6nnh:A (1.523) BS01 1CY 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515966 6nnh:A (1.523) BS02 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515967 6nnh:B (1.523) BS01 1CY 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515968 6nnh:B (1.523) BS02 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515969 6nni:A (1.561) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515970 6nni:A (1.561) BS02 CP6 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515971 6nni:B (1.561) BS01 NDP 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515972 6nni:B (1.561) BS02 CP6 1.5.1.3 GO:0004146 ... P9WNX1 31282477
    515973 6nnj:D (2.6) BS01 BMA N/A N/A N/A 30760721
    515974 6nnj:D (2.6) BS02 MAN N/A N/A N/A 30760721
    515975 6nnj:D (2.6) BS03 MAN N/A N/A N/A 30760721
    515976 6nnj:H (2.6) BS01 MAN N/A N/A N/A 30760721
    515977 6nnj:L (2.6) BS01 MAN N/A N/A N/A 30760721
    515978 6nnn:A (1.35) BS01 MG N/A GO:0000287 ... N/A 31041362
    515979 6nnn:A (1.35) BS02 G1P N/A GO:0000287 ... N/A 31041362
    515980 6nno:A (1.57) BS01 CA N/A GO:0000287 ... N/A 31041362
    515981 6nno:A (1.57) BS02 G1P N/A GO:0000287 ... N/A 31041362
    515982 6nnp:A (1.5) BS01 MG N/A GO:0000287 ... N/A 31041362
    515983 6nnp:A (1.5) BS02 G6P N/A GO:0000287 ... N/A 31041362
    515984 6nnr:A (1.05) BS01 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499
    515985 6nnr:A (1.05) BS02 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499
    515986 6nnr:B (1.05) BS01 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499
    515987 6nnr:B (1.05) BS02 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499
    515988 6nns:A (1.45) BS01 CA N/A GO:0000287 ... N/A 31041362
    515989 6nns:A (1.45) BS02 G6P N/A GO:0000287 ... N/A 31041362
    515990 6nnt:A (1.45) BS01 G16 N/A GO:0000287 ... N/A 31041362
    515991 6nnt:A (1.45) BS02 MG N/A GO:0000287 ... N/A 31041362
    515992 6nnu:A (1.46) BS01 CA N/A GO:0000287 ... N/A 31041362
    515993 6nnu:A (1.46) BS02 G16 N/A GO:0000287 ... N/A 31041362
    515994 6nnv:A (1.92) BS01 peptide ? N/A Q9NZQ7 30728114
    515995 6nnv:B (1.92) BS01 peptide ? N/A Q9NZQ7 30728114
    515996 6nnv:C (1.92) BS01 peptide ? N/A Q9NZQ7 30728114
    515997 6nnv:C (1.92) BS02 peptide ? N/A Q9NZQ7 30728114
    515998 6nnv:D (1.92) BS01 peptide ? N/A Q9NZQ7 30728114
    515999 6nnv:D (1.92) BS02 peptide ? N/A Q9NZQ7 30728114
    516000 6nnw:A (1.7) BS01 KUJ N/A GO:0016853 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).