SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    516201 6nqb:C (3.8) BS01 rna ? GO:0003676 ... P0A7V3 31265110
    516202 6nqb:D (3.8) BS01 rna ? GO:0000028 ... P0A7V8 31265110
    516203 6nqb:E (3.8) BS01 rna ? GO:0003723 ... P0A7W1 31265110
    516204 6nqb:F (3.8) BS01 rna ? GO:0003735 ... P02358 31265110
    516205 6nqb:H (3.8) BS01 rna ? GO:0003735 ... N/A 31265110
    516206 6nqb:J (3.8) BS01 rna ? GO:0000049 ... P0A7R5 31265110
    516207 6nqb:L (3.8) BS01 rna N/A GO:0003735 ... N/A 31265110
    516208 6nqb:N (3.8) BS01 rna ? GO:0000028 ... P0AG59 31265110
    516209 6nqb:O (3.8) BS01 rna ? GO:0000028 ... P0ADZ4 31265110
    516210 6nqb:P (3.8) BS01 rna ? GO:0000028 ... P0A7T3 31265110
    516211 6nqb:Q (3.8) BS01 rna ? GO:0000028 ... P0AG63 31265110
    516212 6nqb:R (3.8) BS01 rna N/A GO:0003735 ... N/A 31265110
    516213 6nqb:S (3.8) BS01 rna N/A GO:0003723 ... N/A 31265110
    516214 6nqb:T (3.8) BS01 rna ? GO:0000028 ... P0A7U7 31265110
    516215 6nqd:C (3.9) BS01 BMA ? N/A S6B2A6 30787293
    516216 6nqd:C (3.9) BS02 MAN ? N/A S6B2A6 30787293
    516217 6nqd:C (3.9) BS03 MAN ? N/A S6B2A6 30787293
    516218 6nqd:C (3.9) BS04 MAN ? N/A S6B2A6 30787293
    516219 6nqd:G (3.9) BS01 BMA ? N/A S6B2A6 30787293
    516220 6nqd:G (3.9) BS02 MAN ? N/A S6B2A6 30787293
    516221 6nqd:G (3.9) BS03 MAN ? N/A S6B2A6 30787293
    516222 6nqd:G (3.9) BS04 MAN ? N/A S6B2A6 30787293
    516223 6nqd:K (3.9) BS01 BMA ? N/A S6B2A6 30787293
    516224 6nqd:K (3.9) BS02 MAN ? N/A S6B2A6 30787293
    516225 6nqd:K (3.9) BS03 MAN ? N/A S6B2A6 30787293
    516226 6nqd:K (3.9) BS04 MAN ? N/A S6B2A6 30787293
    516227 6nqe:A (1.85) BS01 MG N/A GO:0000287 ... N/A 31041362
    516228 6nqf:A (1.9) BS01 CA N/A GO:0000287 ... N/A 31041362
    516229 6nqg:A (2.05) BS01 CA N/A GO:0000287 ... N/A 31041362
    516230 6nqg:A (2.05) BS02 GPM N/A GO:0000287 ... N/A 31041362
    516231 6nqh:A (1.45) BS01 MG N/A GO:0000287 ... N/A N/A
    516232 6nqh:A (1.45) BS02 X1P N/A GO:0000287 ... N/A N/A
    516233 6nqh:A (1.45) BS03 X1P N/A GO:0000287 ... N/A N/A
    516234 6nqm:A (2.9) BS01 FAD 1.14.99.66 GO:0016491 ... O60341 31249575
    516235 6nqt:A (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516236 6nqt:A (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516237 6nqt:B (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516238 6nqt:B (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516239 6nqt:C (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516240 6nqt:C (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516241 6nqt:D (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516242 6nqt:D (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516243 6nqt:E (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516244 6nqt:E (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516245 6nqt:F (3.05) BS01 MN 2.4.1.41 GO:0000139 ... Q10471 32325029
    516246 6nqt:F (3.05) BS02 LR7 2.4.1.41 GO:0000139 ... Q10471 32325029
    516247 6nqu:A (2.7) BS01 KWM 1.14.99.66 GO:0016491 ... O60341 31249575
    516248 6nqz:A (2.58) BS01 I3C ? N/A Q72RA0 N/A
    516249 6nr0:A (2.45) BS01 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516250 6nr0:A (2.45) BS02 KXJ 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516251 6nr0:A (2.45) BS03 KXG 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516252 6nr0:B (2.45) BS01 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516253 6nr0:B (2.45) BS02 KXJ 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516254 6nr0:B (2.45) BS03 KXG 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 31373792
    516255 6nr1:A (2.1) BS01 VCA ? GO:0008289 ... Q8DPT4 N/A
    516256 6nr1:B (2.1) BS01 VCA ? GO:0008289 ... Q8DPT4 N/A
    516257 6nr2:A (4.0) BS01 KXP N/A GO:0005216 ... N/A 30733385
    516258 6nr2:A (4.0) BS02 KXS N/A GO:0005216 ... N/A 30733385
    516259 6nr2:B (4.0) BS01 KXP N/A GO:0005216 ... N/A 30733385
    516260 6nr2:B (4.0) BS02 KXS N/A GO:0005216 ... N/A 30733385
    516261 6nr2:C (4.0) BS01 KXP N/A GO:0005216 ... N/A 30733385
    516262 6nr2:C (4.0) BS02 KXS N/A GO:0005216 ... N/A 30733385
    516263 6nr2:D (4.0) BS01 KXP N/A GO:0005216 ... N/A 30733385
    516264 6nr2:D (4.0) BS02 KXS N/A GO:0005216 ... N/A 30733385
    516265 6nr3:A (3.4) BS01 KX7 N/A GO:0005216 ... N/A 30733385
    516266 6nr3:A (3.4) BS02 KXP N/A GO:0005216 ... N/A 30733385
    516267 6nr3:A (3.4) BS03 CA N/A GO:0005216 ... N/A 30733385
    516268 6nr3:B (3.4) BS01 KX7 N/A GO:0005216 ... N/A 30733385
    516269 6nr3:B (3.4) BS02 KXP N/A GO:0005216 ... N/A 30733385
    516270 6nr3:B (3.4) BS03 CA N/A GO:0005216 ... N/A 30733385
    516271 6nr3:C (3.4) BS01 KX7 N/A GO:0005216 ... N/A 30733385
    516272 6nr3:C (3.4) BS02 KXP N/A GO:0005216 ... N/A 30733385
    516273 6nr3:C (3.4) BS03 CA N/A GO:0005216 ... N/A 30733385
    516274 6nr3:D (3.4) BS01 KX7 N/A GO:0005216 ... N/A 30733385
    516275 6nr3:D (3.4) BS02 KXP N/A GO:0005216 ... N/A 30733385
    516276 6nr3:D (3.4) BS03 CA N/A GO:0005216 ... N/A 30733385
    516277 6nr5:A (2.9) BS01 KXM 1.14.99.66 GO:0016491 ... O60341 31249575
    516278 6nr6:A (1.9) BS01 MG ? GO:0005524 ... A0A166Q2C7 31197035
    516279 6nr6:A (1.9) BS02 ADP ? GO:0005524 ... A0A166Q2C7 31197035
    516280 6nr6:B (1.9) BS01 MG ? GO:0005524 ... A0A166Q2C7 31197035
    516281 6nr6:B (1.9) BS02 ADP ? GO:0005524 ... A0A166Q2C7 31197035
    516282 6nr7:A (3.0) BS01 KYG ? GO:0001725 ... P12003 N/A
    516283 6nrf:A (2.0) BS01 KYV 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 31042381 MOAD: ic50=18nM
    516284 6nrg:A (1.7) BS01 KYY 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 31042381 MOAD: ic50=56nM
    516285 6nrh:A (1.5) BS01 KYP 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 31042381 MOAD: ic50=55nM
    516286 6nri:A (2.2) BS01 KYM 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 31042381 MOAD: ic50=27nM
    BindingDB: IC50=27nM
    516287 6nrj:A (1.65) BS01 KYJ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 31042381 MOAD: ic50=36nM
    BindingDB: IC50=36nM
    516288 6nro:A (1.75) BS01 CA ? GO:0019064 ... P06828 31268705
    516289 6nrq:B (1.8) BS01 FUC ? N/A Q9W4R3 30688651
    516290 6nrw:B (2.4) BS01 FUC ? N/A Q9VMN9 30688651
    516291 6nrz:A (2.1) BS01 LYS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516292 6nrz:A (2.1) BS02 ADN 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516293 6nrz:B (2.1) BS01 LYS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516294 6nrz:B (2.1) BS02 ADN 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516295 6ns0:A (2.2) BS01 LYS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516296 6ns0:A (2.2) BS02 KRS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516297 6ns0:B (2.2) BS01 LYS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516298 6ns0:B (2.2) BS02 KRS 6.1.1.6 GO:0000049 ... B0BAN6 N/A
    516299 6ns2:A (2.79) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516300 6ns2:C (2.79) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516301 6ns3:A (2.84) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516302 6ns4:A (2.4) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516303 6ns4:B (2.4) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516304 6ns5:A (2.79) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516305 6ns5:B (2.79) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516306 6ns6:A (3.3) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516307 6ns6:B (3.3) BS01 FE2 1.13.11.45 GO:0016702 ... I1REW2 30861228
    516308 6nsa:A (1.95) BS01 SIA ? GO:0019031 ... L0HR89 31151913
    516309 6nsb:A (1.75) BS01 SIA ? GO:0019031 ... L0HR89 31151913
    516310 6nsd:A (1.74) BS01 FAD ? GO:0000166 ... W5VG40 30963655
    516311 6nsd:B (1.74) BS01 FAD ? GO:0000166 ... W5VG40 30963655
    516312 6nse:A (2.35) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 N/A
    516313 6nse:A (2.35) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 N/A
    516314 6nse:A (2.35) BS03 GGB 1.14.13.39 GO:0004517 ... P29473 N/A
    516315 6nse:B (2.35) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 N/A
    516316 6nse:B (2.35) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 N/A
    516317 6nse:B (2.35) BS03 GGB 1.14.13.39 GO:0004517 ... P29473 N/A
    516318 6nsf:A (2.1) BS01 SIA ? GO:0019031 ... A8W8K8 31151913
    516319 6nsg:A (2.4) BS01 SIA ? GO:0019031 ... A8W8K8 31151913
    516320 6nsh:QB (3.397) BS01 rna ? GO:0003735 ... P80371 33016876
    516321 6nsh:QC (3.397) BS01 rna ? GO:0003676 ... P80372 33016876
    516322 6nsh:QD (3.397) BS01 rna ? GO:0003723 ... P80373 33016876
    516323 6nsh:QD (3.397) BS02 SF4 ? GO:0003723 ... P80373 33016876
    516324 6nsh:QE (3.397) BS01 rna ? GO:0003723 ... Q5SHQ5 33016876
    516325 6nsh:QF (3.397) BS01 rna ? GO:0003735 ... Q5SLP8 33016876
    516326 6nsh:QF (3.397) BS02 MG ? GO:0003735 ... Q5SLP8 33016876
    516327 6nsh:QG (3.397) BS01 rna ? GO:0000049 ... P17291 33016876
    516328 6nsh:QH (3.397) BS01 rna ? GO:0003735 ... P0DOY9 33016876
    516329 6nsh:QI (3.397) BS01 rna ? GO:0000049 ... P80374 33016876
    516330 6nsh:QI (3.397) BS02 rna ? GO:0000049 ... P80374 33016876
    516331 6nsh:QJ (3.397) BS01 rna ? GO:0000049 ... Q5SHN7 33016876
    516332 6nsh:QK (3.397) BS01 rna ? GO:0003735 ... P80376 33016876
    516333 6nsh:QL (3.397) BS01 rna ? GO:0000049 ... Q5SHN3 33016876
    516334 6nsh:QM (3.397) BS01 rna ? GO:0000049 ... P80377 33016876
    516335 6nsh:QN (3.397) BS01 rna ? GO:0003735 ... P0DOY6 33016876
    516336 6nsh:QN (3.397) BS02 ZN ? GO:0003735 ... P0DOY6 33016876
    516337 6nsh:QO (3.397) BS01 rna ? GO:0003735 ... Q5SJ76 33016876
    516338 6nsh:QO (3.397) BS02 rna ? GO:0003735 ... Q5SJ76 33016876
    516339 6nsh:QP (3.397) BS01 rna ? GO:0003735 ... Q5SJH3 33016876
    516340 6nsh:QQ (3.397) BS01 rna ? GO:0003735 ... P0DOY7 33016876
    516341 6nsh:QR (3.397) BS01 rna ? GO:0003735 ... Q5SLQ0 33016876
    516342 6nsh:QS (3.397) BS01 rna ? GO:0000028 ... Q5SHP2 33016876
    516343 6nsh:QT (3.397) BS01 rna ? GO:0003723 ... P80380 33016876
    516344 6nsh:R0 (3.397) BS01 rna ? GO:0003735 ... P60493 33016876
    516345 6nsh:R0 (3.397) BS02 rna ? GO:0003735 ... P60493 33016876
    516346 6nsh:R1 (3.397) BS01 rna ? GO:0003735 ... P60494 33016876
    516347 6nsh:R2 (3.397) BS01 rna ? GO:0003735 ... Q5SHP6 33016876
    516348 6nsh:R3 (3.397) BS01 rna ? GO:0003735 ... Q5SHQ6 33016876
    516349 6nsh:R3 (3.397) BS02 rna ? GO:0003735 ... Q5SHQ6 33016876
    516350 6nsh:R4 (3.397) BS01 rna ? GO:0003735 ... Q5SJE1 33016876
    516351 6nsh:R4 (3.397) BS02 ZN ? GO:0003735 ... Q5SJE1 33016876
    516352 6nsh:R5 (3.397) BS01 rna ? GO:0003735 ... P80339 33016876
    516353 6nsh:R5 (3.397) BS02 ZN ? GO:0003735 ... P80339 33016876
    516354 6nsh:R6 (3.397) BS01 rna ? GO:0000049 ... P35871 33016876
    516355 6nsh:R6 (3.397) BS02 ZN ? GO:0000049 ... P35871 33016876
    516356 6nsh:R7 (3.397) BS01 rna ? GO:0003735 ... P80340 33016876
    516357 6nsh:R8 (3.397) BS01 rna ? GO:0003735 ... Q5SKU1 33016876
    516358 6nsh:R9 (3.397) BS01 rna ? GO:0003735 ... Q5SHR2 33016876
    516359 6nsh:R9 (3.397) BS02 ZN ? GO:0003735 ... Q5SHR2 33016876
    516360 6nsh:RD (3.397) BS01 rna ? GO:0002181 ... P60405 33016876
    516361 6nsh:RD (3.397) BS02 rna ? GO:0002181 ... P60405 33016876
    516362 6nsh:RE (3.397) BS01 rna ? GO:0003735 ... Q5SHN8 33016876
    516363 6nsh:RF (3.397) BS01 rna ? GO:0003735 ... Q5SHN9 33016876
    516364 6nsh:RG (3.397) BS01 rna ? GO:0000049 ... Q5SHQ0 33016876
    516365 6nsh:RG (3.397) BS02 rna ? GO:0000049 ... Q5SHQ0 33016876
    516366 6nsh:RH (3.397) BS01 rna ? GO:0002181 ... P0DOY8 33016876
    516367 6nsh:RI (3.397) BS01 rna ? GO:0003735 ... Q5SLQ1 33016876
    516368 6nsh:RN (3.397) BS01 rna ? GO:0003729 ... P60488 33016876
    516369 6nsh:RO (3.397) BS01 rna ? GO:0003735 ... Q5SHP8 33016876
    516370 6nsh:RO (3.397) BS02 rna ? GO:0003735 ... Q5SHP8 33016876
    516371 6nsh:RP (3.397) BS01 rna ? GO:0003735 ... Q5SHQ7 33016876
    516372 6nsh:RQ (3.397) BS01 rna ? GO:0000049 ... P60489 33016876
    516373 6nsh:RQ (3.397) BS02 rna ? GO:0000049 ... P60489 33016876
    516374 6nsh:RQ (3.397) BS03 MG ? GO:0000049 ... P60489 33016876
    516375 6nsh:RR (3.397) BS01 rna ? GO:0003735 ... Q9Z9H5 33016876
    516376 6nsh:RS (3.397) BS01 rna ? GO:0003735 ... Q5SHQ4 33016876
    516377 6nsh:RS (3.397) BS02 rna ? GO:0003735 ... Q5SHQ4 33016876
    516378 6nsh:RT (3.397) BS01 rna ? GO:0003735 ... P60490 33016876
    516379 6nsh:RT (3.397) BS02 rna ? GO:0003735 ... P60490 33016876
    516380 6nsh:RU (3.397) BS01 rna ? GO:0000027 ... P60491 33016876
    516381 6nsh:RV (3.397) BS01 rna ? GO:0003723 ... P60492 33016876
    516382 6nsh:RW (3.397) BS01 rna ? GO:0003735 ... Q5SHP3 33016876
    516383 6nsh:RX (3.397) BS01 rna ? GO:0003735 ... Q5SHP0 33016876
    516384 6nsh:RY (3.397) BS01 rna ? GO:0003723 ... Q5SHP9 33016876
    516385 6nsh:RY (3.397) BS02 ZN ? GO:0003723 ... Q5SHP9 33016876
    516386 6nsh:RZ (3.397) BS01 rna ? GO:0003723 ... Q5SHZ1 33016876
    516387 6nsh:RZ (3.397) BS02 rna ? GO:0003723 ... Q5SHZ1 33016876
    516388 6nsh:XB (3.397) BS01 rna ? GO:0003735 ... P80371 33016876
    516389 6nsh:XC (3.397) BS01 rna ? GO:0003676 ... P80372 33016876
    516390 6nsh:XD (3.397) BS01 rna ? GO:0003723 ... P80373 33016876
    516391 6nsh:XD (3.397) BS02 SF4 ? GO:0003723 ... P80373 33016876
    516392 6nsh:XE (3.397) BS01 rna ? GO:0003723 ... Q5SHQ5 33016876
    516393 6nsh:XF (3.397) BS01 rna ? GO:0003735 ... Q5SLP8 33016876
    516394 6nsh:XG (3.397) BS01 rna ? GO:0000049 ... P17291 33016876
    516395 6nsh:XG (3.397) BS02 rna ? GO:0000049 ... P17291 33016876
    516396 6nsh:XH (3.397) BS01 rna ? GO:0003735 ... P0DOY9 33016876
    516397 6nsh:XI (3.397) BS01 rna ? GO:0000049 ... P80374 33016876
    516398 6nsh:XJ (3.397) BS01 rna ? GO:0000049 ... Q5SHN7 33016876
    516399 6nsh:XK (3.397) BS01 rna ? GO:0003735 ... P80376 33016876
    516400 6nsh:XK (3.397) BS02 MG ? GO:0003735 ... P80376 33016876

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).