SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    516601 6nta:RX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 33016876
    516602 6nta:RY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 33016876
    516603 6nta:RY (3.1) BS02 ZN ? GO:0003723 ... Q5SHP9 33016876
    516604 6nta:RZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 33016876
    516605 6nta:RZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 33016876
    516606 6nta:XB (3.1) BS01 rna ? GO:0003735 ... P80371 33016876
    516607 6nta:XC (3.1) BS01 rna ? GO:0003676 ... P80372 33016876
    516608 6nta:XD (3.1) BS01 rna ? GO:0003723 ... P80373 33016876
    516609 6nta:XD (3.1) BS02 SF4 ? GO:0003723 ... P80373 33016876
    516610 6nta:XE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 33016876
    516611 6nta:XE (3.1) BS02 MG ? GO:0003723 ... Q5SHQ5 33016876
    516612 6nta:XF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 33016876
    516613 6nta:XG (3.1) BS01 rna ? GO:0000049 ... P17291 33016876
    516614 6nta:XH (3.1) BS01 rna ? GO:0003735 ... P0DOY9 33016876
    516615 6nta:XI (3.1) BS01 rna ? GO:0000049 ... P80374 33016876
    516616 6nta:XJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 33016876
    516617 6nta:XK (3.1) BS01 rna ? GO:0003735 ... P80376 33016876
    516618 6nta:XK (3.1) BS02 MG ? GO:0003735 ... P80376 33016876
    516619 6nta:XL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 33016876
    516620 6nta:XM (3.1) BS01 rna ? GO:0000049 ... P80377 33016876
    516621 6nta:XM (3.1) BS02 MG ? GO:0000049 ... P80377 33016876
    516622 6nta:XN (3.1) BS01 rna ? GO:0003735 ... P0DOY6 33016876
    516623 6nta:XN (3.1) BS02 MG ? GO:0003735 ... P0DOY6 33016876
    516624 6nta:XN (3.1) BS03 ZN ? GO:0003735 ... P0DOY6 33016876
    516625 6nta:XO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 33016876
    516626 6nta:XO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 33016876
    516627 6nta:XP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 33016876
    516628 6nta:XQ (3.1) BS01 rna ? GO:0003735 ... P0DOY7 33016876
    516629 6nta:XQ (3.1) BS02 MG ? GO:0003735 ... P0DOY7 33016876
    516630 6nta:XR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 33016876
    516631 6nta:XS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 33016876
    516632 6nta:XT (3.1) BS01 rna ? GO:0003723 ... P80380 33016876
    516633 6nta:Y0 (3.1) BS01 rna ? GO:0003735 ... P60493 33016876
    516634 6nta:Y0 (3.1) BS02 rna ? GO:0003735 ... P60493 33016876
    516635 6nta:Y1 (3.1) BS01 rna ? GO:0003735 ... P60494 33016876
    516636 6nta:Y2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 33016876
    516637 6nta:Y3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 33016876
    516638 6nta:Y3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 33016876
    516639 6nta:Y4 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 33016876
    516640 6nta:Y5 (3.1) BS01 rna ? GO:0003735 ... P80339 33016876
    516641 6nta:Y5 (3.1) BS02 ZN ? GO:0003735 ... P80339 33016876
    516642 6nta:Y6 (3.1) BS01 rna ? GO:0000049 ... P35871 33016876
    516643 6nta:Y6 (3.1) BS02 ZN ? GO:0000049 ... P35871 33016876
    516644 6nta:Y7 (3.1) BS01 rna ? GO:0003735 ... P80340 33016876
    516645 6nta:Y7 (3.1) BS02 MG ? GO:0003735 ... P80340 33016876
    516646 6nta:Y8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 33016876
    516647 6nta:Y9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 33016876
    516648 6nta:Y9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 33016876
    516649 6nta:YD (3.1) BS01 rna ? GO:0002181 ... P60405 33016876
    516650 6nta:YD (3.1) BS02 rna ? GO:0002181 ... P60405 33016876
    516651 6nta:YD (3.1) BS03 MG ? GO:0002181 ... P60405 33016876
    516652 6nta:YD (3.1) BS04 MG ? GO:0002181 ... P60405 33016876
    516653 6nta:YE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 33016876
    516654 6nta:YE (3.1) BS02 MG ? GO:0003735 ... Q5SHN8 33016876
    516655 6nta:YE (3.1) BS03 MG ? GO:0003735 ... Q5SHN8 33016876
    516656 6nta:YF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 33016876
    516657 6nta:YG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 33016876
    516658 6nta:YG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 33016876
    516659 6nta:YH (3.1) BS01 rna ? GO:0002181 ... P0DOY8 33016876
    516660 6nta:YI (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 33016876
    516661 6nta:YI (3.1) BS02 rna ? GO:0003735 ... Q5SLQ1 33016876
    516662 6nta:YN (3.1) BS01 rna ? GO:0003729 ... P60488 33016876
    516663 6nta:YO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 33016876
    516664 6nta:YO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 33016876
    516665 6nta:YP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 33016876
    516666 6nta:YQ (3.1) BS01 rna ? GO:0000049 ... P60489 33016876
    516667 6nta:YQ (3.1) BS02 rna ? GO:0000049 ... P60489 33016876
    516668 6nta:YR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 33016876
    516669 6nta:YS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 33016876
    516670 6nta:YS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 33016876
    516671 6nta:YT (3.1) BS01 rna ? GO:0003735 ... P60490 33016876
    516672 6nta:YT (3.1) BS02 rna ? GO:0003735 ... P60490 33016876
    516673 6nta:YU (3.1) BS01 rna ? GO:0000027 ... P60491 33016876
    516674 6nta:YV (3.1) BS01 rna ? GO:0003723 ... P60492 33016876
    516675 6nta:YW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 33016876
    516676 6nta:YX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 33016876
    516677 6nta:YX (3.1) BS02 MG ? GO:0003735 ... Q5SHP0 33016876
    516678 6nta:YY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 33016876
    516679 6nta:YY (3.1) BS02 ZN ? GO:0003723 ... Q5SHP9 33016876
    516680 6nta:YZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 33016876
    516681 6nta:YZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 33016876
    516682 6ntb:A (1.9) BS01 ATP ? GO:0005524 ... B5II98 N/A
    516683 6ntb:A (1.9) BS02 ATP ? GO:0005524 ... B5II98 N/A
    516684 6ntb:B (1.9) BS01 ATP ? GO:0005524 ... B5II98 N/A
    516685 6ntb:B (1.9) BS02 ATP ? GO:0005524 ... B5II98 N/A
    516686 6ntb:C (1.9) BS01 ATP ? GO:0005524 ... B5II98 N/A
    516687 6ntb:C (1.9) BS02 ATP ? GO:0005524 ... B5II98 N/A
    516688 6ntc:A (2.9) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 32086379
    516689 6ntc:A (2.9) BS02 MG 3.6.5.2 GO:0003924 ... P01112 32086379
    516690 6ntd:A (3.15) BS01 MG 3.6.5.2 GO:0003924 ... P01112 32086379
    516691 6ntd:A (3.15) BS02 GNP 3.6.5.2 GO:0003924 ... P01112 32086379
    516692 6ntf:A (2.8) BS01 MG N/A GO:0019031 ... N/A 31481254
    516693 6ntf:A (2.8) BS02 MG N/A GO:0019031 ... N/A 31481254
    516694 6ntf:A (2.8) BS03 MG N/A GO:0019031 ... N/A 31481254
    516695 6ntf:A (2.8) BS04 MG N/A GO:0019031 ... N/A 31481254
    516696 6ntg:A (2.652) BS01 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516697 6ntg:A (2.652) BS02 L1M 3.1.1.7 GO:0001507 ... P22303 N/A
    516698 6ntg:B (2.652) BS01 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516699 6ntg:B (2.652) BS02 L1M 3.1.1.7 GO:0001507 ... P22303 N/A
    516700 6nth:A (2.421) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516701 6nth:B (2.421) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516702 6nti:A (2.3) BS01 9CS 2.3.1.81 GO:0016746 ... C4NV15 31515870
    516703 6ntj:A (1.9) BS01 LLL 2.3.1.81 GO:0016746 ... C4NV15 31515870
    516704 6ntk:A (2.406) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516705 6ntk:B (2.406) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516706 6ntl:A (2.25) BS01 L1M 3.1.1.7 GO:0001507 ... P22303 N/A
    516707 6ntl:B (2.25) BS01 L1M 3.1.1.7 GO:0001507 ... P22303 N/A
    516708 6ntm:A (2.552) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516709 6ntm:A (2.552) BS02 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516710 6ntm:B (2.552) BS01 L0S 3.1.1.7 GO:0001507 ... P22303 N/A
    516711 6ntm:B (2.552) BS02 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516712 6ntn:A (2.697) BS01 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516713 6ntn:A (2.697) BS02 L2Y 3.1.1.7 GO:0001507 ... P22303 N/A
    516714 6ntn:B (2.697) BS01 HI6 3.1.1.7 GO:0001507 ... P22303 N/A BindingDB: IC50=667800nM, Kd=93000nM
    516715 6ntn:B (2.697) BS02 L2Y 3.1.1.7 GO:0001507 ... P22303 N/A
    516716 6nto:A (2.052) BS01 L2Y 3.1.1.7 GO:0001507 ... P22303 N/A
    516717 6nto:B (2.052) BS01 L2Y 3.1.1.7 GO:0001507 ... P22303 N/A
    516718 6nts:A (3.63) BS01 L2J ? GO:0000159 ... P30153 32315618
    516719 6nts:B (3.63) BS01 L2J ? GO:0000159 ... Q15172 32315618
    516720 6nts:C (3.63) BS01 MN 3.1.3.16 GO:0000159 ... P67775 32315618
    516721 6nts:C (3.63) BS02 MN 3.1.3.16 GO:0000159 ... P67775 32315618
    516722 6ntt:A (2.4) BS01 21D ? GO:0004866 ... P01070 N/A
    516723 6ntt:B (2.4) BS01 21D ? GO:0004866 ... P01070 N/A
    516724 6ntt:B (2.4) BS02 21D ? GO:0004866 ... P01070 N/A
    516725 6ntu:A (1.8) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 32241924
    516726 6ntu:A (1.8) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 32241924
    516727 6ntu:A (1.8) BS03 L1S 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 32241924
    516728 6ntw:A (2.76) BS01 MXR 2.-.-.- GO:0000270 ... P22525 31015395
    516729 6ntx:B (2.2) BS01 peptide ? GO:0019064 ... P03420 31268705
    516730 6ntx:C (2.2) BS01 peptide ? N/A P06828 31268705
    516731 6ntz:A (2.2) BS01 MXR 3.4.16.4
    3.5.2.6
    GO:0004180 ... P0AEB2 31015395
    516732 6nu1:A (2.25) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516733 6nu1:A (2.25) BS02 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516734 6nu1:A (2.25) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516735 6nu1:A (2.25) BS04 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516736 6nu1:B (2.25) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516737 6nu1:B (2.25) BS02 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516738 6nu1:B (2.25) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516739 6nu1:B (2.25) BS04 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516740 6nu1:C (2.25) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516741 6nu1:C (2.25) BS02 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516742 6nu1:C (2.25) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516743 6nu1:C (2.25) BS04 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516744 6nu1:D (2.25) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516745 6nu1:D (2.25) BS02 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516746 6nu1:D (2.25) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516747 6nu1:D (2.25) BS04 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 31386812
    516748 6nu2:0 (3.9) BS01 rna ? GO:0003735 ... Q9BYC8 30962385
    516749 6nu2:0 (3.9) BS02 ZN ? GO:0003735 ... Q9BYC8 30962385
    516750 6nu2:1 (3.9) BS01 rna ? GO:0003735 ... O75394 30962385
    516751 6nu2:2 (3.9) BS01 rna ? GO:0003735 ... Q9BQ48 30962385
    516752 6nu2:3 (3.9) BS01 rna ? GO:0003735 ... Q9NZE8 30962385
    516753 6nu2:4 (3.9) BS01 rna ? GO:0003735 ... Q9P0J6 30962385
    516754 6nu2:4 (3.9) BS02 ZN ? GO:0003735 ... Q9P0J6 30962385
    516755 6nu2:5 (3.9) BS01 rna ? GO:0003723 ... Q9BZE1 30962385
    516756 6nu2:6 (3.9) BS01 rna ? GO:0005515 ... Q96DV4 30962385
    516757 6nu2:6 (3.9) BS02 rna ? GO:0005515 ... Q96DV4 30962385
    516758 6nu2:8 (3.9) BS01 rna ? GO:0005762 ... Q9NQ50 30962385
    516759 6nu2:9 (3.9) BS01 rna ? GO:0003723 ... Q8IXM3 30962385
    516760 6nu2:A0 (3.9) BS01 rna ? GO:0003735 ... P82930 30962385
    516761 6nu2:A2 (3.9) BS01 rna ? GO:0001650 ... Q96BP2 30962385
    516762 6nu2:A3 (3.9) BS01 rna ? N/A Q9NWT8 30962385
    516763 6nu2:A3 (3.9) BS02 rna ? N/A Q9NWT8 30962385
    516764 6nu2:AB (3.9) BS01 rna ? GO:0003735 ... Q9Y399 30962385
    516765 6nu2:AB (3.9) BS02 ZN ? GO:0003735 ... Q9Y399 30962385
    516766 6nu2:AC (3.9) BS01 rna ? GO:0005739 ... Q96EL2 30962385
    516767 6nu2:AD (3.9) BS01 rna ? GO:0003723 ... P82675 30962385
    516768 6nu2:AE (3.9) BS01 rna ? GO:0003735 ... P82932 30962385
    516769 6nu2:AF (3.9) BS01 rna ? GO:0006412 ... Q9Y2R9 30962385
    516770 6nu2:AG (3.9) BS01 rna ? GO:0003735 ... P82933 30962385
    516771 6nu2:AG (3.9) BS02 MG ? GO:0003735 ... P82933 30962385
    516772 6nu2:AH (3.9) BS01 rna ? GO:0005763 ... P82664 30962385
    516773 6nu2:AI (3.9) BS01 rna ? GO:0003735 ... P82912 30962385
    516774 6nu2:AJ (3.9) BS01 rna ? GO:0003735 ... O15235 30962385
    516775 6nu2:AK (3.9) BS01 rna ? GO:0003735 ... O60783 30962385
    516776 6nu2:AL (3.9) BS01 rna ? GO:0003735 ... P82914 30962385
    516777 6nu2:AM (3.9) BS01 rna ? GO:0003735 ... Q9Y3D3 30962385
    516778 6nu2:AN (3.9) BS01 rna ? GO:0003735 ... Q9Y2R5 30962385
    516779 6nu2:AO (3.9) BS01 rna ? GO:0003735 ... Q9Y676 30962385
    516780 6nu2:AO (3.9) BS02 ZN ? GO:0003735 ... Q9Y676 30962385
    516781 6nu2:AP (3.9) BS01 rna ? GO:0003735 ... Q9Y3D5 30962385
    516782 6nu2:AP (3.9) BS02 ZN ? GO:0003735 ... Q9Y3D5 30962385
    516783 6nu2:AQ (3.9) BS01 rna ? GO:0003723 ... P82921 30962385
    516784 6nu2:AS (3.9) BS01 rna ? GO:0003735 ... Q9Y3D9 30962385
    516785 6nu2:AT (3.9) BS01 rna ? GO:0003735 ... P82663 30962385
    516786 6nu2:AT (3.9) BS02 ZN ? GO:0003735 ... P82663 30962385
    516787 6nu2:AU (3.9) BS01 rna ? GO:0005763 ... Q9BYN8 30962385
    516788 6nu2:AV (3.9) BS01 rna ? N/A Q92552 30962385
    516789 6nu2:AX (3.9) BS01 rna ? GO:0005761 ... P51398 30962385
    516790 6nu2:AZ (3.9) BS01 rna ? N/A Q9Y291 30962385
    516791 6nu2:D (3.9) BS01 rna ? GO:0003735 ... Q5T653 30962385
    516792 6nu2:E (3.9) BS01 rna ? GO:0003735 ... P09001 30962385
    516793 6nu2:F (3.9) BS01 rna ? GO:0003735 ... Q9BYD3 30962385
    516794 6nu2:F (3.9) BS02 MG ? GO:0003735 ... Q9BYD3 30962385
    516795 6nu2:H (3.9) BS01 rna ? GO:0003735 ... Q9BYD2 30962385
    516796 6nu2:I (3.9) BS01 rna ? N/A Q7Z7H8 30962385
    516797 6nu2:I (3.9) BS02 peptide ? N/A Q7Z7H8 30962385
    516798 6nu2:J (3.9) BS01 rna ? GO:0003735 ... Q9Y3B7 30962385
    516799 6nu2:K (3.9) BS01 rna ? GO:0003723 ... Q9BYD1 30962385
    516800 6nu2:L (3.9) BS01 rna ? GO:0003735 ... Q6P1L8 30962385

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).