SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    521801 6og7:w (3.3) BS02 rna ? GO:0003735 ... P0A7L8 31513010
    521802 6og7:x (3.3) BS01 rna ? GO:0000027 ... P0A7M2 31513010
    521803 6og7:y (3.3) BS01 rna ? GO:0000027 ... P0A7M6 31513010
    521804 6og7:z (3.3) BS01 rna ? GO:0000027 ... P0AG51 31513010
    521805 6og7:z (3.3) BS02 rna ? GO:0000027 ... P0AG51 31513010
    521806 6ogf:8 (3.9) BS01 rna ? GO:0003747 ... P07012 31513010
    521807 6ogf:8 (3.9) BS02 rna ? GO:0003747 ... P07012 31513010
    521808 6ogf:8 (3.9) BS03 rna ? GO:0003747 ... P07012 31513010
    521809 6ogf:8 (3.9) BS04 rna ? GO:0003747 ... P07012 31513010
    521810 6ogf:B (3.9) BS01 rna ? GO:0000027 ... P0A7N4 31513010
    521811 6ogf:C (3.9) BS01 rna ? GO:0000027 ... P0A7N9 31513010
    521812 6ogf:D (3.9) BS01 rna ? GO:0002181 ... P0A7P5 31513010
    521813 6ogf:E (3.9) BS01 rna ? GO:0002181 ... P0A7Q1 31513010
    521814 6ogf:F (3.9) BS01 rna ? GO:0002181 ... P0A7Q6 31513010
    521815 6ogf:G (3.9) BS01 rna ? GO:0000028 ... P0A7V0 31513010
    521816 6ogf:H (3.9) BS01 rna ? GO:0000028 ... P0A7V3 31513010
    521817 6ogf:I (3.9) BS01 rna ? GO:0000028 ... P0A7V8 31513010
    521818 6ogf:J (3.9) BS01 rna ? GO:0000028 ... P0A7W1 31513010
    521819 6ogf:K (3.9) BS01 rna ? GO:0002181 ... P02358 31513010
    521820 6ogf:L (3.9) BS01 rna ? GO:0003723 ... P02359 31513010
    521821 6ogf:M (3.9) BS01 rna ? GO:0000028 ... P0A7W7 31513010
    521822 6ogf:N (3.9) BS01 rna ? GO:0000049 ... P0A7X3 31513010
    521823 6ogf:O (3.9) BS01 rna ? GO:0000049 ... P0A7R5 31513010
    521824 6ogf:P (3.9) BS01 rna ? GO:0002181 ... P0A7R9 31513010
    521825 6ogf:Q (3.9) BS01 rna ? GO:0000049 ... P0A7S3 31513010
    521826 6ogf:R (3.9) BS01 rna ? GO:0000049 ... P0A7S9 31513010
    521827 6ogf:S (3.9) BS01 rna ? GO:0000028 ... P0AG59 31513010
    521828 6ogf:T (3.9) BS01 rna ? GO:0000028 ... P0ADZ4 31513010
    521829 6ogf:T (3.9) BS02 rna ? GO:0000028 ... P0ADZ4 31513010
    521830 6ogf:U (3.9) BS01 rna ? GO:0000028 ... P0A7T3 31513010
    521831 6ogf:V (3.9) BS01 rna ? GO:0000028 ... P0AG63 31513010
    521832 6ogf:W (3.9) BS01 rna ? GO:0002181 ... P0A7T7 31513010
    521833 6ogf:X (3.9) BS01 rna ? GO:0000028 ... P0A7U3 31513010
    521834 6ogf:Y (3.9) BS01 rna ? GO:0000028 ... P0A7U7 31513010
    521835 6ogf:Z (3.9) BS01 rna ? GO:0000028 ... P68679 31513010
    521836 6ogf:Z (3.9) BS02 rna ? GO:0000028 ... P68679 31513010
    521837 6ogf:a (3.9) BS01 rna ? GO:0000027 ... P0A7L0 31513010
    521838 6ogf:b (3.9) BS01 rna ? GO:0000027 ... P60422 31513010
    521839 6ogf:c (3.9) BS01 rna ? GO:0000027 ... P60438 31513010
    521840 6ogf:d (3.9) BS01 rna ? GO:0001070 ... P60723 31513010
    521841 6ogf:e (3.9) BS01 rna ? GO:0000027 ... P62399 31513010
    521842 6ogf:e (3.9) BS02 rna ? GO:0000027 ... P62399 31513010
    521843 6ogf:f (3.9) BS01 rna ? GO:0000027 ... P0AG55 31513010
    521844 6ogf:g (3.9) BS01 rna ? GO:0002181 ... P0A7R1 31513010
    521845 6ogf:j (3.9) BS01 rna ? GO:0002181 ... P0AA10 31513010
    521846 6ogf:k (3.9) BS01 rna ? GO:0002181 ... P0ADY3 31513010
    521847 6ogf:k (3.9) BS02 rna ? GO:0002181 ... P0ADY3 31513010
    521848 6ogf:l (3.9) BS01 rna ? GO:0002181 ... P02413 31513010
    521849 6ogf:m (3.9) BS01 rna ? GO:0000027 ... P0ADY7 31513010
    521850 6ogf:m (3.9) BS02 rna ? GO:0000027 ... P0ADY7 31513010
    521851 6ogf:n (3.9) BS01 rna ? GO:0000027 ... P0AG44 31513010
    521852 6ogf:o (3.9) BS01 rna ? GO:0002181 ... P0C018 31513010
    521853 6ogf:o (3.9) BS02 rna ? GO:0002181 ... P0C018 31513010
    521854 6ogf:p (3.9) BS01 rna ? GO:0000027 ... P0A7K6 31513010
    521855 6ogf:p (3.9) BS02 rna ? GO:0000027 ... P0A7K6 31513010
    521856 6ogf:q (3.9) BS01 rna ? GO:0000027 ... P0A7L3 31513010
    521857 6ogf:r (3.9) BS01 rna ? GO:0002181 ... P0AG48 31513010
    521858 6ogf:s (3.9) BS01 rna ? GO:0002181 ... P61175 31513010
    521859 6ogf:t (3.9) BS01 rna ? GO:0000027 ... P0ADZ0 31513010
    521860 6ogf:u (3.9) BS01 rna ? GO:0000027 ... P60624 31513010
    521861 6ogf:v (3.9) BS01 rna ? GO:0000027 ... P68919 31513010
    521862 6ogf:v (3.9) BS02 rna ? GO:0000027 ... P68919 31513010
    521863 6ogf:w (3.9) BS01 rna ? GO:0000027 ... P0A7L8 31513010
    521864 6ogf:w (3.9) BS02 rna ? GO:0000027 ... P0A7L8 31513010
    521865 6ogf:x (3.9) BS01 rna ? GO:0000027 ... P0A7M2 31513010
    521866 6ogf:y (3.9) BS01 rna ? GO:0000027 ... P0A7M6 31513010
    521867 6ogf:z (3.9) BS01 rna ? GO:0000027 ... P0AG51 31513010
    521868 6ogf:z (3.9) BS02 rna ? GO:0000027 ... P0AG51 31513010
    521869 6ogg:8 (4.2) BS01 rna ? GO:0003747 ... P07012 31513010
    521870 6ogg:8 (4.2) BS02 rna ? GO:0003747 ... P07012 31513010
    521871 6ogg:8 (4.2) BS03 rna ? GO:0003747 ... P07012 31513010
    521872 6ogg:B (4.2) BS01 rna ? GO:0000027 ... P0A7N4 31513010
    521873 6ogg:C (4.2) BS01 rna ? GO:0000027 ... P0A7N9 31513010
    521874 6ogg:D (4.2) BS01 rna ? GO:0002181 ... P0A7P5 31513010
    521875 6ogg:E (4.2) BS01 rna ? GO:0002181 ... P0A7Q1 31513010
    521876 6ogg:F (4.2) BS01 rna ? GO:0002181 ... P0A7Q6 31513010
    521877 6ogg:G (4.2) BS01 rna ? GO:0000028 ... P0A7V0 31513010
    521878 6ogg:H (4.2) BS01 rna ? GO:0000028 ... P0A7V3 31513010
    521879 6ogg:I (4.2) BS01 rna ? GO:0000028 ... P0A7V8 31513010
    521880 6ogg:J (4.2) BS01 rna ? GO:0000028 ... P0A7W1 31513010
    521881 6ogg:K (4.2) BS01 rna ? GO:0002181 ... P02358 31513010
    521882 6ogg:L (4.2) BS01 rna ? GO:0003723 ... P02359 31513010
    521883 6ogg:M (4.2) BS01 rna ? GO:0000028 ... P0A7W7 31513010
    521884 6ogg:N (4.2) BS01 rna ? GO:0000049 ... P0A7X3 31513010
    521885 6ogg:O (4.2) BS01 rna ? GO:0000049 ... P0A7R5 31513010
    521886 6ogg:P (4.2) BS01 rna ? GO:0002181 ... P0A7R9 31513010
    521887 6ogg:Q (4.2) BS01 rna ? GO:0000049 ... P0A7S3 31513010
    521888 6ogg:R (4.2) BS01 rna ? GO:0000049 ... P0A7S9 31513010
    521889 6ogg:S (4.2) BS01 rna ? GO:0000028 ... P0AG59 31513010
    521890 6ogg:T (4.2) BS01 rna ? GO:0000028 ... P0ADZ4 31513010
    521891 6ogg:U (4.2) BS01 rna ? GO:0000028 ... P0A7T3 31513010
    521892 6ogg:V (4.2) BS01 rna ? GO:0000028 ... P0AG63 31513010
    521893 6ogg:W (4.2) BS01 rna ? GO:0002181 ... P0A7T7 31513010
    521894 6ogg:X (4.2) BS01 rna ? GO:0000028 ... P0A7U3 31513010
    521895 6ogg:Y (4.2) BS01 rna ? GO:0000028 ... P0A7U7 31513010
    521896 6ogg:Z (4.2) BS01 rna ? GO:0000028 ... P68679 31513010
    521897 6ogg:Z (4.2) BS02 rna ? GO:0000028 ... P68679 31513010
    521898 6ogg:a (4.2) BS01 rna ? GO:0000027 ... P0A7L0 31513010
    521899 6ogg:b (4.2) BS01 rna ? GO:0000027 ... P60422 31513010
    521900 6ogg:c (4.2) BS01 rna ? GO:0000027 ... P60438 31513010
    521901 6ogg:d (4.2) BS01 rna ? GO:0001070 ... P60723 31513010
    521902 6ogg:e (4.2) BS01 rna ? GO:0000027 ... P62399 31513010
    521903 6ogg:e (4.2) BS02 rna ? GO:0000027 ... P62399 31513010
    521904 6ogg:f (4.2) BS01 rna ? GO:0000027 ... P0AG55 31513010
    521905 6ogg:g (4.2) BS01 rna ? GO:0002181 ... P0A7R1 31513010
    521906 6ogg:j (4.2) BS01 rna ? GO:0002181 ... P0AA10 31513010
    521907 6ogg:k (4.2) BS01 rna ? GO:0002181 ... P0ADY3 31513010
    521908 6ogg:k (4.2) BS02 rna ? GO:0002181 ... P0ADY3 31513010
    521909 6ogg:l (4.2) BS01 rna ? GO:0002181 ... P02413 31513010
    521910 6ogg:m (4.2) BS01 rna ? GO:0000027 ... P0ADY7 31513010
    521911 6ogg:m (4.2) BS02 rna ? GO:0000027 ... P0ADY7 31513010
    521912 6ogg:n (4.2) BS01 rna ? GO:0000027 ... P0AG44 31513010
    521913 6ogg:o (4.2) BS01 rna ? GO:0002181 ... P0C018 31513010
    521914 6ogg:o (4.2) BS02 rna ? GO:0002181 ... P0C018 31513010
    521915 6ogg:p (4.2) BS01 rna ? GO:0000027 ... P0A7K6 31513010
    521916 6ogg:p (4.2) BS02 rna ? GO:0000027 ... P0A7K6 31513010
    521917 6ogg:q (4.2) BS01 rna ? GO:0000027 ... P0A7L3 31513010
    521918 6ogg:r (4.2) BS01 rna ? GO:0002181 ... P0AG48 31513010
    521919 6ogg:s (4.2) BS01 rna ? GO:0002181 ... P61175 31513010
    521920 6ogg:t (4.2) BS01 rna ? GO:0000027 ... P0ADZ0 31513010
    521921 6ogg:u (4.2) BS01 rna ? GO:0000027 ... P60624 31513010
    521922 6ogg:v (4.2) BS01 rna ? GO:0000027 ... P68919 31513010
    521923 6ogg:v (4.2) BS02 rna ? GO:0000027 ... P68919 31513010
    521924 6ogg:w (4.2) BS01 rna ? GO:0000027 ... P0A7L8 31513010
    521925 6ogg:w (4.2) BS02 rna ? GO:0000027 ... P0A7L8 31513010
    521926 6ogg:x (4.2) BS01 rna ? GO:0000027 ... P0A7M2 31513010
    521927 6ogg:y (4.2) BS01 rna ? GO:0000027 ... P0A7M6 31513010
    521928 6ogg:z (4.2) BS01 rna ? GO:0000027 ... P0AG51 31513010
    521929 6ogg:z (4.2) BS02 rna ? GO:0000027 ... P0AG51 31513010
    521930 6ogh:A (1.85) BS01 CO ? GO:0005549 ... Q1HRL7 32094450
    521931 6ogh:A (1.85) BS02 EIC ? GO:0005549 ... Q1HRL7 32094450
    521932 6ogi:B (3.4) BS01 rna ? GO:0000027 ... P0A7N4 31513010
    521933 6ogi:C (3.4) BS01 rna ? GO:0000027 ... P0A7N9 31513010
    521934 6ogi:D (3.4) BS01 rna ? GO:0002181 ... P0A7P5 31513010
    521935 6ogi:E (3.4) BS01 rna ? GO:0002181 ... P0A7Q1 31513010
    521936 6ogi:F (3.4) BS01 rna ? GO:0002181 ... P0A7Q6 31513010
    521937 6ogi:G (3.4) BS01 rna ? GO:0000028 ... P0A7V0 31513010
    521938 6ogi:H (3.4) BS01 rna ? GO:0000028 ... P0A7V3 31513010
    521939 6ogi:I (3.4) BS01 rna ? GO:0000028 ... P0A7V8 31513010
    521940 6ogi:J (3.4) BS01 rna ? GO:0000028 ... P0A7W1 31513010
    521941 6ogi:K (3.4) BS01 rna ? GO:0002181 ... P02358 31513010
    521942 6ogi:L (3.4) BS01 rna ? GO:0003723 ... P02359 31513010
    521943 6ogi:L (3.4) BS02 rna ? GO:0003723 ... P02359 31513010
    521944 6ogi:M (3.4) BS01 rna ? GO:0000028 ... P0A7W7 31513010
    521945 6ogi:N (3.4) BS01 rna ? GO:0000049 ... P0A7X3 31513010
    521946 6ogi:N (3.4) BS02 rna ? GO:0000049 ... P0A7X3 31513010
    521947 6ogi:O (3.4) BS01 rna ? GO:0000049 ... P0A7R5 31513010
    521948 6ogi:P (3.4) BS01 rna ? GO:0002181 ... P0A7R9 31513010
    521949 6ogi:Q (3.4) BS01 rna ? GO:0000049 ... P0A7S3 31513010
    521950 6ogi:R (3.4) BS01 rna ? GO:0000049 ... P0A7S9 31513010
    521951 6ogi:S (3.4) BS01 rna ? GO:0000028 ... P0AG59 31513010
    521952 6ogi:T (3.4) BS01 rna ? GO:0000028 ... P0ADZ4 31513010
    521953 6ogi:T (3.4) BS02 rna ? GO:0000028 ... P0ADZ4 31513010
    521954 6ogi:U (3.4) BS01 rna ? GO:0000028 ... P0A7T3 31513010
    521955 6ogi:V (3.4) BS01 rna ? GO:0000028 ... P0AG63 31513010
    521956 6ogi:W (3.4) BS01 rna ? GO:0002181 ... P0A7T7 31513010
    521957 6ogi:X (3.4) BS01 rna ? GO:0000028 ... P0A7U3 31513010
    521958 6ogi:Y (3.4) BS01 rna ? GO:0000028 ... P0A7U7 31513010
    521959 6ogi:Z (3.4) BS01 rna ? GO:0000028 ... P68679 31513010
    521960 6ogi:Z (3.4) BS02 rna ? GO:0000028 ... P68679 31513010
    521961 6ogi:a (3.4) BS01 rna ? GO:0000027 ... P0A7L0 31513010
    521962 6ogi:b (3.4) BS01 rna ? GO:0000027 ... P60422 31513010
    521963 6ogi:c (3.4) BS01 rna ? GO:0000027 ... P60438 31513010
    521964 6ogi:d (3.4) BS01 rna ? GO:0001070 ... P60723 31513010
    521965 6ogi:e (3.4) BS01 rna ? GO:0000027 ... P62399 31513010
    521966 6ogi:e (3.4) BS02 rna ? GO:0000027 ... P62399 31513010
    521967 6ogi:f (3.4) BS01 rna ? GO:0000027 ... P0AG55 31513010
    521968 6ogi:g (3.4) BS01 rna ? GO:0002181 ... P0A7R1 31513010
    521969 6ogi:j (3.4) BS01 rna ? GO:0002181 ... P0AA10 31513010
    521970 6ogi:k (3.4) BS01 rna ? GO:0002181 ... P0ADY3 31513010
    521971 6ogi:k (3.4) BS02 rna ? GO:0002181 ... P0ADY3 31513010
    521972 6ogi:l (3.4) BS01 rna ? GO:0002181 ... P02413 31513010
    521973 6ogi:m (3.4) BS01 rna ? GO:0000027 ... P0ADY7 31513010
    521974 6ogi:m (3.4) BS02 rna ? GO:0000027 ... P0ADY7 31513010
    521975 6ogi:n (3.4) BS01 rna ? GO:0000027 ... P0AG44 31513010
    521976 6ogi:o (3.4) BS01 rna ? GO:0002181 ... P0C018 31513010
    521977 6ogi:o (3.4) BS02 rna ? GO:0002181 ... P0C018 31513010
    521978 6ogi:p (3.4) BS01 rna ? GO:0000027 ... P0A7K6 31513010
    521979 6ogi:p (3.4) BS02 rna ? GO:0000027 ... P0A7K6 31513010
    521980 6ogi:q (3.4) BS01 rna ? GO:0000027 ... P0A7L3 31513010
    521981 6ogi:r (3.4) BS01 rna ? GO:0002181 ... P0AG48 31513010
    521982 6ogi:s (3.4) BS01 rna ? GO:0002181 ... P61175 31513010
    521983 6ogi:t (3.4) BS01 rna ? GO:0000027 ... P0ADZ0 31513010
    521984 6ogi:u (3.4) BS01 rna ? GO:0000027 ... P60624 31513010
    521985 6ogi:v (3.4) BS01 rna ? GO:0000027 ... P68919 31513010
    521986 6ogi:w (3.4) BS01 rna ? GO:0000027 ... P0A7L8 31513010
    521987 6ogi:w (3.4) BS02 rna ? GO:0000027 ... P0A7L8 31513010
    521988 6ogi:x (3.4) BS01 rna ? GO:0000027 ... P0A7M2 31513010
    521989 6ogi:y (3.4) BS01 rna ? GO:0000027 ... P0A7M6 31513010
    521990 6ogi:z (3.4) BS01 rna ? GO:0000027 ... P0AG51 31513010
    521991 6ogi:z (3.4) BS02 rna ? GO:0000027 ... P0AG51 31513010
    521992 6ogj:A (1.8) BS01 dna ? GO:0003677 ... P51608 31356990
    521993 6ogj:A (1.8) BS02 dna ? GO:0003677 ... P51608 31356990
    521994 6ogj:B (1.8) BS01 dna ? GO:0003677 ... P51608 31356990
    521995 6ogj:B (1.8) BS02 dna ? GO:0003677 ... P51608 31356990
    521996 6ogk:A (1.65) BS01 dna ? GO:0003677 ... P51608 31356990
    521997 6ogk:A (1.65) BS02 dna ? GO:0003677 ... P51608 31356990
    521998 6ogl:A (1.21) BS01 JDV ? GO:0004190 ... A0A4P8EW36 32606378
    521999 6ogn:A (2.4) BS01 ZN 2.1.1.321 GO:0000387 ... Q922X9 32409666
    522000 6ogn:A (2.4) BS02 MJ7 2.1.1.321 GO:0000387 ... Q922X9 32409666

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).