SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    522201 6oig:Q (3.8) BS01 rna ? GO:0002181 ... P0CX49 33219089
    522202 6oig:R (3.8) BS01 rna ? GO:0002181 ... P0CX82 33219089
    522203 6oig:S (3.8) BS01 rna ? GO:0002181 ... P0CX23 33219089
    522204 6oig:S (3.8) BS02 rna ? GO:0002181 ... P0CX23 33219089
    522205 6oig:T (3.8) BS01 rna ? GO:0002181 ... Q02753 33219089
    522206 6oig:T (3.8) BS02 rna ? GO:0002181 ... Q02753 33219089
    522207 6oig:U (3.8) BS01 rna ? GO:0003735 ... P05749 33219089
    522208 6oig:V (3.8) BS01 rna ? GO:0002181 ... P0CX41 33219089
    522209 6oig:W (3.8) BS01 rna ? GO:0003735 ... P04449 33219089
    522210 6oig:X (3.8) BS01 rna ? GO:0003735 ... P04456 33219089
    522211 6oig:X (3.8) BS02 rna ? GO:0003735 ... P04456 33219089
    522212 6oig:Y (3.8) BS01 rna ? GO:0002181 ... P05743 33219089
    522213 6oig:Y (3.8) BS02 rna ? GO:0002181 ... P05743 33219089
    522214 6oig:Z (3.8) BS01 rna ? GO:0002181 ... P0C2H6 33219089
    522215 6oig:a (3.8) BS01 rna ? GO:0002181 ... P02406 33219089
    522216 6oig:b (3.8) BS01 rna ? GO:0002181 ... P05747 33219089
    522217 6oig:c (3.8) BS01 rna ? GO:0002181 ... P14120 33219089
    522218 6oig:d (3.8) BS01 rna ? GO:0002181 ... P0C2H8 33219089
    522219 6oig:e (3.8) BS01 rna ? GO:0002181 ... P38061 33219089
    522220 6oig:f (3.8) BS01 rna ? GO:0000027 ... P05744 33219089
    522221 6oig:g (3.8) BS01 rna ? GO:0002181 ... P87262 33219089
    522222 6oig:h (3.8) BS01 rna ? GO:0000463 ... P0CX84 33219089
    522223 6oig:h (3.8) BS02 rna ? GO:0000463 ... P0CX84 33219089
    522224 6oig:i (3.8) BS01 rna ? GO:0002181 ... P05745 33219089
    522225 6oig:j (3.8) BS01 rna ? GO:0000448 ... P49166 33219089
    522226 6oig:j (3.8) BS02 rna ? GO:0000448 ... P49166 33219089
    522227 6oig:k (3.8) BS01 rna ? GO:0002181 ... P49167 33219089
    522228 6oig:l (3.8) BS01 rna ? GO:0002181 ... P04650 33219089
    522229 6oig:l (3.8) BS02 rna ? GO:0002181 ... P04650 33219089
    522230 6oig:m (3.8) BS01 rna ? GO:0003735 ... P0CH08 33219089
    522231 6oig:o (3.8) BS01 rna ? GO:0002181 ... P0CX27 33219089
    522232 6oig:p (3.8) BS01 rna ? GO:0002181 ... P0CX25 33219089
    522233 6oig:q (3.8) BS01 rna ? N/A P05317 33219089
    522234 6oig:s (3.8) BS01 rna ? GO:0000027 ... P0CX53 33219089
    522235 6oig:z (3.8) BS01 rna ? GO:0000055 ... P0CX43 33219089
    522236 6oii:A (1.85) BS01 ACD ? GO:0005549 ... Q1HRL7 32094450
    522237 6oii:A (1.85) BS02 CO ? GO:0005549 ... Q1HRL7 32094450
    522238 6oii:B (1.85) BS01 ACD ? GO:0005549 ... Q1HRL7 32094450
    522239 6oii:B (1.85) BS02 CO ? GO:0005549 ... Q1HRL7 32094450
    522240 6oij:R (3.3) BS01 IXO ? GO:0004930 ... P11229 31073061
    522241 6oij:R (3.3) BS02 Y01 ? GO:0004930 ... P11229 31073061
    522242 6oij:R (3.3) BS03 Y01 ? GO:0004930 ... P11229 31073061
    522243 6oik:R (3.6) BS01 IXO ? GO:0004930 ... P08172 31073061 BindingDB: Ki=8.7nM, EC50=0.280000nM
    522244 6oik:R (3.6) BS02 2CU ? GO:0004930 ... P08172 31073061 BindingDB: Ki=5495nM, IC50=<31623nM
    522245 6oim:A (1.65) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 31666701
    522246 6oim:A (1.65) BS02 MOV 3.6.5.2 GO:0003924 ... P01116 31666701
    522247 6oin:A (1.7) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522248 6oin:A (1.7) BS02 MQJ 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522249 6oio:A (1.7) BS01 ML7 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522250 6oio:A (1.7) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522251 6oip:A (1.8) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522252 6oip:A (1.8) BS02 MLS 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522253 6oiq:A (1.75) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522254 6oiq:A (1.75) BS02 MLV 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522255 6oir:A (2.03) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522256 6oir:A (2.03) BS02 MNJ 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 31256587
    522257 6oiu:A (2.2) BS01 ZN 3.4.11.2 GO:0006508 ... S8G5K8 32926129
    522258 6oiu:B (2.2) BS01 ZN 3.4.11.2 GO:0006508 ... S8G5K8 32926129
    522259 6oiu:C (2.2) BS01 ZN 3.4.11.2 GO:0006508 ... S8G5K8 32926129
    522260 6oiu:D (2.2) BS01 ZN 3.4.11.2 GO:0006508 ... S8G5K8 32926129
    522261 6oiv:A (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522262 6oiv:B (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522263 6oiv:C (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522264 6oiv:D (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522265 6oiv:E (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522266 6oiv:F (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522267 6oiw:A (3.35) BS01 MG 3.1.5.1 GO:0000287 ... P15723 31019074
    522268 6oiw:A (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522269 6oiw:A (3.35) BS03 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522270 6oiw:B (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522271 6oiw:B (3.35) BS02 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522272 6oiw:C (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522273 6oiw:C (3.35) BS02 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522274 6oiw:D (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522275 6oiw:D (3.35) BS02 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522276 6oiw:E (3.35) BS01 MG 3.1.5.1 GO:0000287 ... P15723 31019074
    522277 6oiw:E (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522278 6oiw:E (3.35) BS03 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522279 6oiw:F (3.35) BS01 MG 3.1.5.1 GO:0000287 ... P15723 31019074
    522280 6oiw:F (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522281 6oiw:F (3.35) BS03 T8T 3.1.5.1 GO:0000287 ... P15723 31019074
    522282 6oix:A (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522283 6oix:A (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522284 6oix:B (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522285 6oix:B (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522286 6oix:C (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522287 6oix:C (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522288 6oix:D (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522289 6oix:D (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522290 6oix:E (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522291 6oix:E (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522292 6oix:F (3.15) BS01 GTP 3.1.5.1 GO:0000287 ... P15723 31019074
    522293 6oix:F (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522294 6oiy:A (3.29) BS01 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522295 6oiy:A (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522296 6oiy:B (3.29) BS01 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522297 6oiy:B (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522298 6oiy:C (3.29) BS01 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522299 6oiy:C (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522300 6oiy:D (3.29) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522301 6oiy:D (3.29) BS02 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522302 6oiy:E (3.29) BS01 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522303 6oiy:E (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522304 6oiy:F (3.29) BS01 DGT 3.1.5.1 GO:0000287 ... P15723 31019074
    522305 6oiy:F (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    522306 6oj2:QB (3.2) BS01 rna ? GO:0003735 ... P80371 32601241
    522307 6oj2:QC (3.2) BS01 rna ? GO:0003676 ... P80372 32601241
    522308 6oj2:QD (3.2) BS01 rna ? GO:0003723 ... P80373 32601241
    522309 6oj2:QD (3.2) BS02 SF4 ? GO:0003723 ... P80373 32601241
    522310 6oj2:QE (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 32601241
    522311 6oj2:QF (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 32601241
    522312 6oj2:QF (3.2) BS02 MG ? GO:0003735 ... Q5SLP8 32601241
    522313 6oj2:QG (3.2) BS01 rna ? GO:0000049 ... P17291 32601241
    522314 6oj2:QG (3.2) BS02 rna ? GO:0000049 ... P17291 32601241
    522315 6oj2:QH (3.2) BS01 rna ? GO:0003735 ... P0DOY9 32601241
    522316 6oj2:QH (3.2) BS02 MG ? GO:0003735 ... P0DOY9 32601241
    522317 6oj2:QI (3.2) BS01 rna ? GO:0000049 ... P80374 32601241
    522318 6oj2:QI (3.2) BS02 rna ? GO:0000049 ... P80374 32601241
    522319 6oj2:QJ (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 32601241
    522320 6oj2:QJ (3.2) BS02 rna ? GO:0000049 ... Q5SHN7 32601241
    522321 6oj2:QK (3.2) BS01 rna ? GO:0003735 ... P80376 32601241
    522322 6oj2:QL (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 32601241
    522323 6oj2:QM (3.2) BS01 rna ? GO:0000049 ... P80377 32601241
    522324 6oj2:QM (3.2) BS02 rna ? GO:0000049 ... P80377 32601241
    522325 6oj2:QM (3.2) BS03 MG ? GO:0000049 ... P80377 32601241
    522326 6oj2:QN (3.2) BS01 rna ? GO:0003735 ... P0DOY6 32601241
    522327 6oj2:QO (3.2) BS01 rna ? GO:0003735 ... Q5SJ76 32601241
    522328 6oj2:QO (3.2) BS02 rna ? GO:0003735 ... Q5SJ76 32601241
    522329 6oj2:QP (3.2) BS01 rna ? GO:0003735 ... Q5SJH3 32601241
    522330 6oj2:QQ (3.2) BS01 rna ? GO:0003735 ... P0DOY7 32601241
    522331 6oj2:QR (3.2) BS01 rna ? GO:0003735 ... Q5SLQ0 32601241
    522332 6oj2:QS (3.2) BS01 rna ? GO:0000028 ... Q5SHP2 32601241
    522333 6oj2:QT (3.2) BS01 rna ? GO:0003723 ... P80380 32601241
    522334 6oj2:R0 (3.2) BS01 rna ? GO:0003735 ... P60493 32601241
    522335 6oj2:R0 (3.2) BS02 rna ? GO:0003735 ... P60493 32601241
    522336 6oj2:R1 (3.2) BS01 rna ? GO:0003735 ... P60494 32601241
    522337 6oj2:R2 (3.2) BS01 rna ? GO:0003735 ... Q5SHP6 32601241
    522338 6oj2:R3 (3.2) BS01 rna ? GO:0003735 ... Q5SHQ6 32601241
    522339 6oj2:R3 (3.2) BS02 rna ? GO:0003735 ... Q5SHQ6 32601241
    522340 6oj2:R4 (3.2) BS01 rna ? GO:0003735 ... Q5SJE1 32601241
    522341 6oj2:R5 (3.2) BS01 rna ? GO:0003735 ... P80339 32601241
    522342 6oj2:R6 (3.2) BS01 rna ? GO:0000049 ... P35871 32601241
    522343 6oj2:R7 (3.2) BS01 rna ? GO:0003735 ... P80340 32601241
    522344 6oj2:R8 (3.2) BS01 rna ? GO:0003735 ... Q5SKU1 32601241
    522345 6oj2:R9 (3.2) BS01 rna ? GO:0003735 ... Q5SHR2 32601241
    522346 6oj2:RD (3.2) BS01 rna ? GO:0002181 ... P60405 32601241
    522347 6oj2:RD (3.2) BS02 rna ? GO:0002181 ... P60405 32601241
    522348 6oj2:RE (3.2) BS01 rna ? GO:0003735 ... Q5SHN8 32601241
    522349 6oj2:RF (3.2) BS01 rna ? GO:0003735 ... Q5SHN9 32601241
    522350 6oj2:RF (3.2) BS02 MG ? GO:0003735 ... Q5SHN9 32601241
    522351 6oj2:RG (3.2) BS01 rna ? GO:0000049 ... Q5SHQ0 32601241
    522352 6oj2:RG (3.2) BS02 rna ? GO:0000049 ... Q5SHQ0 32601241
    522353 6oj2:RG (3.2) BS03 rna ? GO:0000049 ... Q5SHQ0 32601241
    522354 6oj2:RH (3.2) BS01 rna ? GO:0002181 ... P0DOY8 32601241
    522355 6oj2:RI (3.2) BS01 rna ? GO:0003735 ... Q5SLQ1 32601241
    522356 6oj2:RN (3.2) BS01 rna ? GO:0003729 ... P60488 32601241
    522357 6oj2:RO (3.2) BS01 rna ? GO:0003735 ... Q5SHP8 32601241
    522358 6oj2:RO (3.2) BS02 rna ? GO:0003735 ... Q5SHP8 32601241
    522359 6oj2:RP (3.2) BS01 rna ? GO:0003735 ... Q5SHQ7 32601241
    522360 6oj2:RP (3.2) BS02 MG ? GO:0003735 ... Q5SHQ7 32601241
    522361 6oj2:RP (3.2) BS03 MG ? GO:0003735 ... Q5SHQ7 32601241
    522362 6oj2:RQ (3.2) BS01 rna ? GO:0000049 ... P60489 32601241
    522363 6oj2:RQ (3.2) BS02 rna ? GO:0000049 ... P60489 32601241
    522364 6oj2:RQ (3.2) BS03 rna ? GO:0000049 ... P60489 32601241
    522365 6oj2:RQ (3.2) BS04 MG ? GO:0000049 ... P60489 32601241
    522366 6oj2:RR (3.2) BS01 rna ? GO:0003735 ... Q9Z9H5 32601241
    522367 6oj2:RS (3.2) BS01 rna ? GO:0003735 ... Q5SHQ4 32601241
    522368 6oj2:RS (3.2) BS02 rna ? GO:0003735 ... Q5SHQ4 32601241
    522369 6oj2:RT (3.2) BS01 rna ? GO:0003735 ... P60490 32601241
    522370 6oj2:RT (3.2) BS02 rna ? GO:0003735 ... P60490 32601241
    522371 6oj2:RU (3.2) BS01 rna ? GO:0000027 ... P60491 32601241
    522372 6oj2:RV (3.2) BS01 rna ? GO:0003723 ... P60492 32601241
    522373 6oj2:RW (3.2) BS01 rna ? GO:0003735 ... Q5SHP3 32601241
    522374 6oj2:RX (3.2) BS01 rna ? GO:0003735 ... Q5SHP0 32601241
    522375 6oj2:RX (3.2) BS02 MG ? GO:0003735 ... Q5SHP0 32601241
    522376 6oj2:RX (3.2) BS03 MG ? GO:0003735 ... Q5SHP0 32601241
    522377 6oj2:RY (3.2) BS01 rna ? GO:0003723 ... Q5SHP9 32601241
    522378 6oj2:RZ (3.2) BS01 rna ? GO:0003723 ... Q5SHZ1 32601241
    522379 6oj2:RZ (3.2) BS02 rna ? GO:0003723 ... Q5SHZ1 32601241
    522380 6oj2:RZ (3.2) BS03 rna ? GO:0003723 ... Q5SHZ1 32601241
    522381 6oj2:XB (3.2) BS01 rna ? GO:0003735 ... P80371 32601241
    522382 6oj2:XC (3.2) BS01 rna ? GO:0003676 ... P80372 32601241
    522383 6oj2:XD (3.2) BS01 rna ? GO:0003723 ... P80373 32601241
    522384 6oj2:XD (3.2) BS02 SF4 ? GO:0003723 ... P80373 32601241
    522385 6oj2:XD (3.2) BS03 MG ? GO:0003723 ... P80373 32601241
    522386 6oj2:XE (3.2) BS01 rna ? GO:0003723 ... Q5SHQ5 32601241
    522387 6oj2:XF (3.2) BS01 rna ? GO:0003735 ... Q5SLP8 32601241
    522388 6oj2:XF (3.2) BS02 MG ? GO:0003735 ... Q5SLP8 32601241
    522389 6oj2:XG (3.2) BS01 rna ? GO:0000049 ... P17291 32601241
    522390 6oj2:XG (3.2) BS02 rna ? GO:0000049 ... P17291 32601241
    522391 6oj2:XH (3.2) BS01 rna ? GO:0003735 ... P0DOY9 32601241
    522392 6oj2:XI (3.2) BS01 rna ? GO:0000049 ... P80374 32601241
    522393 6oj2:XI (3.2) BS02 rna ? GO:0000049 ... P80374 32601241
    522394 6oj2:XJ (3.2) BS01 rna ? GO:0000049 ... Q5SHN7 32601241
    522395 6oj2:XK (3.2) BS01 rna ? GO:0003735 ... P80376 32601241
    522396 6oj2:XK (3.2) BS02 rna ? GO:0003735 ... P80376 32601241
    522397 6oj2:XK (3.2) BS03 rna ? GO:0003735 ... P80376 32601241
    522398 6oj2:XL (3.2) BS01 rna ? GO:0000049 ... Q5SHN3 32601241
    522399 6oj2:XM (3.2) BS01 rna ? GO:0000049 ... P80377 32601241
    522400 6oj2:XM (3.2) BS02 rna ? GO:0000049 ... P80377 32601241

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).