SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    522801 6ole:a (3.1) BS01 rna ? GO:0002181 ... P61353 31160784
    522802 6ole:b (3.1) BS01 rna ? GO:0002181 ... P46776 31160784
    522803 6ole:c (3.1) BS01 rna ? GO:0003735 ... P47914 31160784
    522804 6ole:d (3.1) BS01 rna ? GO:0002181 ... P62888 31160784
    522805 6ole:d (3.1) BS02 rna ? GO:0002181 ... P62888 31160784
    522806 6ole:e (3.1) BS01 rna ? GO:0003735 ... P62899 31160784
    522807 6ole:f (3.1) BS01 rna ? GO:0002181 ... P62910 31160784
    522808 6ole:g (3.1) BS01 rna ? GO:0000049 ... P18077 31160784
    522809 6ole:h (3.1) BS01 rna ? GO:0002181 ... P49207 31160784
    522810 6ole:i (3.1) BS01 rna ? GO:0000463 ... P42766 31160784
    522811 6ole:i (3.1) BS02 rna ? GO:0000463 ... P42766 31160784
    522812 6ole:j (3.1) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    522813 6ole:k (3.1) BS01 rna ? GO:0003735 ... P61927 31160784
    522814 6ole:k (3.1) BS02 rna ? GO:0003735 ... P61927 31160784
    522815 6ole:k (3.1) BS03 ZN ? GO:0003735 ... P61927 31160784
    522816 6ole:l (3.1) BS01 rna ? GO:0001501 ... P63173 31160784
    522817 6ole:m (3.1) BS01 rna ? GO:0002181 ... P62891 31160784
    522818 6ole:m (3.1) BS02 rna ? GO:0002181 ... P62891 31160784
    522819 6ole:n (3.1) BS01 rna ? GO:0003735 ... P62987 31160784
    522820 6ole:p (3.1) BS01 rna ? GO:0002181 ... P83881 31160784
    522821 6ole:p (3.1) BS02 rna ? GO:0002181 ... P83881 31160784
    522822 6ole:p (3.1) BS03 ZN ? GO:0002181 ... P83881 31160784
    522823 6ole:q (3.1) BS01 rna ? GO:0002181 ... P61513 31160784
    522824 6ole:q (3.1) BS02 ZN ? GO:0002181 ... P61513 31160784
    522825 6ole:r (3.1) BS01 rna ? GO:0003735 ... P46779 31160784
    522826 6ole:y (3.1) BS01 rna ? N/A P12830 31160784
    522827 6ole:y (3.1) BS02 MVM ? N/A P12830 31160784
    522828 6olf:A (3.9) BS01 rna ? GO:0002181 ... P62917 31160784
    522829 6olf:B (3.9) BS01 rna ? GO:0002181 ... P39023 31160784
    522830 6olf:C (3.9) BS01 rna ? GO:0003735 ... P36578 31160784
    522831 6olf:C (3.9) BS02 rna ? GO:0003735 ... P36578 31160784
    522832 6olf:F (3.9) BS01 rna ? GO:0000027 ... P46777 31160784
    522833 6olf:F (3.9) BS02 rna ? GO:0000027 ... P46777 31160784
    522834 6olf:G (3.9) BS01 rna ? GO:0003735 ... Q02878 31160784
    522835 6olf:H (3.9) BS01 rna ? GO:0000463 ... P18124 31160784
    522836 6olf:H (3.9) BS02 rna ? GO:0000463 ... P18124 31160784
    522837 6olf:I (3.9) BS01 rna ? GO:0003723 ... P62424 31160784
    522838 6olf:I (3.9) BS02 rna ? GO:0003723 ... P62424 31160784
    522839 6olf:J (3.9) BS01 rna ? GO:0002181 ... P32969 31160784
    522840 6olf:K (3.9) BS01 rna ? GO:0000122 ... P27635 31160784
    522841 6olf:K (3.9) BS02 rna ? GO:0000122 ... P27635 31160784
    522842 6olf:K (3.9) BS03 rna ? GO:0000122 ... P27635 31160784
    522843 6olf:L (3.9) BS01 rna ? GO:0000027 ... P62913 31160784
    522844 6olf:L (3.9) BS02 rna ? GO:0000027 ... P62913 31160784
    522845 6olf:M (3.9) BS01 rna ? GO:0001824 ... P26373 31160784
    522846 6olf:N (3.9) BS01 rna ? GO:0003723 ... P50914 31160784
    522847 6olf:O (3.9) BS01 rna ? GO:0002181 ... P61313 31160784
    522848 6olf:O (3.9) BS02 rna ? GO:0002181 ... P61313 31160784
    522849 6olf:P (3.9) BS01 rna ? GO:0002181 ... P40429 31160784
    522850 6olf:Q (3.9) BS01 rna ? GO:0003735 ... P18621 31160784
    522851 6olf:Q (3.9) BS02 rna ? GO:0003735 ... P18621 31160784
    522852 6olf:R (3.9) BS01 rna ? GO:0002181 ... Q07020 31160784
    522853 6olf:S (3.9) BS01 rna ? GO:0002181 ... P84098 31160784
    522854 6olf:S (3.9) BS02 rna ? GO:0002181 ... P84098 31160784
    522855 6olf:SA (3.9) BS01 rna ? GO:0003735 ... P08865 31160784
    522856 6olf:SB (3.9) BS01 rna ? GO:0003735 ... P61247 31160784
    522857 6olf:SB (3.9) BS02 rna ? GO:0003735 ... P61247 31160784
    522858 6olf:SC (3.9) BS01 rna ? GO:0003723 ... P15880 31160784
    522859 6olf:SD (3.9) BS01 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    522860 6olf:SE (3.9) BS01 rna ? GO:0002181 ... P62701 31160784
    522861 6olf:SF (3.9) BS01 rna ? GO:0000028 ... P46782 31160784
    522862 6olf:SF (3.9) BS02 MG ? GO:0000028 ... P46782 31160784
    522863 6olf:SG (3.9) BS01 rna ? GO:0000082 ... P62753 31160784
    522864 6olf:SH (3.9) BS01 rna ? GO:0001843 ... P62081 31160784
    522865 6olf:SI (3.9) BS01 rna ? GO:0000462 ... P62241 31160784
    522866 6olf:SI (3.9) BS02 rna ? GO:0000462 ... P62241 31160784
    522867 6olf:SJ (3.9) BS01 rna ? GO:0002181 ... P46781 31160784
    522868 6olf:SK (3.9) BS01 rna ? N/A P46783 31160784
    522869 6olf:SL (3.9) BS01 rna ? GO:0002181 ... P62280 31160784
    522870 6olf:SM (3.9) BS01 rna ? GO:0003735 ... P25398 31160784
    522871 6olf:SN (3.9) BS01 rna ? GO:0002181 ... P62277 31160784
    522872 6olf:SN (3.9) BS02 rna ? GO:0002181 ... P62277 31160784
    522873 6olf:SO (3.9) BS01 rna ? GO:0000028 ... P62263 31160784
    522874 6olf:SP (3.9) BS01 rna ? GO:0003723 ... P62841 31160784
    522875 6olf:SQ (3.9) BS01 rna ? GO:0000462 ... P62249 31160784
    522876 6olf:SR (3.9) BS01 rna ? GO:0002181 ... P08708 31160784
    522877 6olf:SS (3.9) BS01 rna ? GO:0002181 ... P62269 31160784
    522878 6olf:ST (3.9) BS01 rna ? GO:0000028 ... P39019 31160784
    522879 6olf:SU (3.9) BS01 rna ? GO:0003723 ... P60866 31160784
    522880 6olf:SW (3.9) BS01 rna ? GO:0002181 ... P62244 31160784
    522881 6olf:SX (3.9) BS01 rna ? GO:0002181 ... P62266 31160784
    522882 6olf:SY (3.9) BS01 rna ? GO:0002181 ... P62847 31160784
    522883 6olf:SZ (3.9) BS01 rna ? N/A P62851 31160784
    522884 6olf:Sa (3.9) BS01 rna ? GO:0003735 ... P62854 31160784
    522885 6olf:Sa (3.9) BS02 ZN ? GO:0003735 ... P62854 31160784
    522886 6olf:Sb (3.9) BS01 rna ? GO:0000028 ... P42677 31160784
    522887 6olf:Sc (3.9) BS01 rna ? GO:0000028 ... P62857 31160784
    522888 6olf:Sd (3.9) BS01 rna ? GO:0002181 ... P62273 31160784
    522889 6olf:Se (3.9) BS01 rna ? GO:0003735 ... P62861 31160784
    522890 6olf:Sf (3.9) BS01 rna ? GO:0003735 ... P62979 31160784
    522891 6olf:Sf (3.9) BS02 ZN ? GO:0003735 ... P62979 31160784
    522892 6olf:Sg (3.9) BS01 rna ? GO:0001891 ... P63244 31160784
    522893 6olf:T (3.9) BS01 rna ? GO:0002181 ... Q02543 31160784
    522894 6olf:T (3.9) BS02 rna ? GO:0002181 ... Q02543 31160784
    522895 6olf:U (3.9) BS01 rna ? GO:0002181 ... P46778 31160784
    522896 6olf:U (3.9) BS02 rna ? GO:0002181 ... P46778 31160784
    522897 6olf:V (3.9) BS01 rna ? GO:0003735 ... P35268 31160784
    522898 6olf:W (3.9) BS01 rna ? GO:0000122 ... P62829 31160784
    522899 6olf:W (3.9) BS02 rna ? GO:0000122 ... P62829 31160784
    522900 6olf:X (3.9) BS01 rna ? GO:0003735 ... P83731 31160784
    522901 6olf:X (3.9) BS02 rna ? GO:0003735 ... P83731 31160784
    522902 6olf:Y (3.9) BS01 rna ? GO:0003735 ... P62750 31160784
    522903 6olf:Y (3.9) BS02 rna ? GO:0003735 ... P62750 31160784
    522904 6olf:Z (3.9) BS01 rna ? GO:0002181 ... P61254 31160784
    522905 6olf:Z (3.9) BS02 rna ? GO:0002181 ... P61254 31160784
    522906 6olf:a (3.9) BS01 rna ? GO:0002181 ... P61353 31160784
    522907 6olf:b (3.9) BS01 rna ? GO:0002181 ... P46776 31160784
    522908 6olf:b (3.9) BS02 MG ? GO:0002181 ... P46776 31160784
    522909 6olf:c (3.9) BS01 rna ? GO:0003735 ... P47914 31160784
    522910 6olf:d (3.9) BS01 rna ? GO:0002181 ... P62888 31160784
    522911 6olf:d (3.9) BS02 rna ? GO:0002181 ... P62888 31160784
    522912 6olf:e (3.9) BS01 rna ? GO:0003735 ... P62899 31160784
    522913 6olf:f (3.9) BS01 rna ? GO:0002181 ... P62910 31160784
    522914 6olf:g (3.9) BS01 rna ? GO:0000049 ... P18077 31160784
    522915 6olf:h (3.9) BS01 rna ? GO:0002181 ... P49207 31160784
    522916 6olf:i (3.9) BS01 rna ? GO:0000463 ... P42766 31160784
    522917 6olf:i (3.9) BS02 rna ? GO:0000463 ... P42766 31160784
    522918 6olf:j (3.9) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    522919 6olf:k (3.9) BS01 rna ? GO:0003735 ... P61927 31160784
    522920 6olf:k (3.9) BS02 rna ? GO:0003735 ... P61927 31160784
    522921 6olf:k (3.9) BS03 ZN ? GO:0003735 ... P61927 31160784
    522922 6olf:l (3.9) BS01 rna ? GO:0001501 ... P63173 31160784
    522923 6olf:m (3.9) BS01 rna ? GO:0002181 ... P62891 31160784
    522924 6olf:m (3.9) BS02 rna ? GO:0002181 ... P62891 31160784
    522925 6olf:n (3.9) BS01 rna ? GO:0003735 ... P62987 31160784
    522926 6olf:p (3.9) BS01 rna ? GO:0002181 ... P83881 31160784
    522927 6olf:p (3.9) BS02 rna ? GO:0002181 ... P83881 31160784
    522928 6olf:p (3.9) BS03 ZN ? GO:0002181 ... P83881 31160784
    522929 6olf:q (3.9) BS01 rna ? GO:0002181 ... P61513 31160784
    522930 6olf:q (3.9) BS02 ZN ? GO:0002181 ... P61513 31160784
    522931 6olf:r (3.9) BS01 rna ? GO:0003735 ... P46779 31160784
    522932 6olf:y (3.9) BS01 rna ? N/A P12830 31160784
    522933 6olf:y (3.9) BS02 MVM ? N/A P12830 31160784
    522934 6olg:A (3.4) BS01 rna ? N/A P12830 31160784
    522935 6olg:A (3.4) BS02 rna ? N/A P12830 31160784
    522936 6olg:AA (3.4) BS01 rna ? GO:0002181 ... P62917 31160784
    522937 6olg:AA (3.4) BS02 rna ? GO:0002181 ... P62917 31160784
    522938 6olg:AB (3.4) BS01 rna ? GO:0002181 ... P39023 31160784
    522939 6olg:AC (3.4) BS01 rna ? GO:0003735 ... P36578 31160784
    522940 6olg:AC (3.4) BS02 rna ? GO:0003735 ... P36578 31160784
    522941 6olg:AD (3.4) BS01 rna ? GO:0000027 ... P46777 31160784
    522942 6olg:AD (3.4) BS02 rna ? GO:0000027 ... P46777 31160784
    522943 6olg:AE (3.4) BS01 rna ? GO:0003735 ... Q02878 31160784
    522944 6olg:AF (3.4) BS01 rna ? GO:0000463 ... P18124 31160784
    522945 6olg:AF (3.4) BS02 rna ? GO:0000463 ... P18124 31160784
    522946 6olg:AG (3.4) BS01 rna ? GO:0003723 ... P62424 31160784
    522947 6olg:AG (3.4) BS02 rna ? GO:0003723 ... P62424 31160784
    522948 6olg:AH (3.4) BS01 rna ? GO:0002181 ... P32969 31160784
    522949 6olg:AI (3.4) BS01 rna ? GO:0000122 ... P27635 31160784
    522950 6olg:AI (3.4) BS02 rna ? GO:0000122 ... P27635 31160784
    522951 6olg:AI (3.4) BS03 rna ? GO:0000122 ... P27635 31160784
    522952 6olg:AJ (3.4) BS01 rna ? GO:0000027 ... P62913 31160784
    522953 6olg:AJ (3.4) BS02 rna ? GO:0000027 ... P62913 31160784
    522954 6olg:AJ (3.4) BS03 rna ? GO:0000027 ... P62913 31160784
    522955 6olg:AK (3.4) BS01 rna ? N/A P05388 31160784
    522956 6olg:AL (3.4) BS01 rna ? GO:0001824 ... P26373 31160784
    522957 6olg:AL (3.4) BS02 rna ? GO:0001824 ... P26373 31160784
    522958 6olg:AM (3.4) BS01 rna ? GO:0003723 ... P50914 31160784
    522959 6olg:AN (3.4) BS01 rna ? GO:0002181 ... P61313 31160784
    522960 6olg:AN (3.4) BS02 rna ? GO:0002181 ... P61313 31160784
    522961 6olg:AO (3.4) BS01 rna ? GO:0002181 ... P40429 31160784
    522962 6olg:AP (3.4) BS01 rna ? GO:0003735 ... P18621 31160784
    522963 6olg:AP (3.4) BS02 rna ? GO:0003735 ... P18621 31160784
    522964 6olg:AQ (3.4) BS01 rna ? GO:0002181 ... Q07020 31160784
    522965 6olg:AR (3.4) BS01 rna ? GO:0002181 ... P84098 31160784
    522966 6olg:AR (3.4) BS02 rna ? GO:0002181 ... P84098 31160784
    522967 6olg:AS (3.4) BS01 rna ? GO:0002181 ... Q02543 31160784
    522968 6olg:AS (3.4) BS02 rna ? GO:0002181 ... Q02543 31160784
    522969 6olg:AT (3.4) BS01 rna ? GO:0002181 ... P46778 31160784
    522970 6olg:AT (3.4) BS02 rna ? GO:0002181 ... P46778 31160784
    522971 6olg:AU (3.4) BS01 rna ? GO:0003735 ... P35268 31160784
    522972 6olg:AV (3.4) BS01 rna ? GO:0000122 ... P62829 31160784
    522973 6olg:AW (3.4) BS01 rna ? GO:0003735 ... P83731 31160784
    522974 6olg:AW (3.4) BS02 rna ? GO:0003735 ... P83731 31160784
    522975 6olg:AX (3.4) BS01 rna ? GO:0003735 ... P62750 31160784
    522976 6olg:AX (3.4) BS02 rna ? GO:0003735 ... P62750 31160784
    522977 6olg:AY (3.4) BS01 rna ? GO:0003723 ... P61254 31160784
    522978 6olg:AY (3.4) BS02 rna ? GO:0003723 ... P61254 31160784
    522979 6olg:AZ (3.4) BS01 rna ? GO:0002181 ... P61353 31160784
    522980 6olg:Aa (3.4) BS01 rna ? GO:0002181 ... P46776 31160784
    522981 6olg:Ab (3.4) BS01 rna ? GO:0003735 ... P47914 31160784
    522982 6olg:Ac (3.4) BS01 rna ? GO:0002181 ... P62888 31160784
    522983 6olg:Ad (3.4) BS01 rna ? GO:0003735 ... P62899 31160784
    522984 6olg:Ae (3.4) BS01 rna ? GO:0002181 ... P62910 31160784
    522985 6olg:Af (3.4) BS01 rna ? GO:0000049 ... P18077 31160784
    522986 6olg:Ag (3.4) BS01 rna ? GO:0002181 ... P49207 31160784
    522987 6olg:Ah (3.4) BS01 rna ? GO:0000463 ... P42766 31160784
    522988 6olg:Ah (3.4) BS02 rna ? GO:0000463 ... P42766 31160784
    522989 6olg:Ai (3.4) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    522990 6olg:Aj (3.4) BS01 rna ? GO:0003735 ... P61927 31160784
    522991 6olg:Aj (3.4) BS02 rna ? GO:0003735 ... P61927 31160784
    522992 6olg:Ak (3.4) BS01 rna ? GO:0001501 ... P63173 31160784
    522993 6olg:Al (3.4) BS01 rna ? GO:0002181 ... P62891 31160784
    522994 6olg:Al (3.4) BS02 rna ? GO:0002181 ... P62891 31160784
    522995 6olg:Am (3.4) BS01 rna ? GO:0003735 ... P62987 31160784
    522996 6olg:Ao (3.4) BS01 rna ? GO:0002181 ... P83881 31160784
    522997 6olg:Ao (3.4) BS02 rna ? GO:0002181 ... P83881 31160784
    522998 6olg:Ap (3.4) BS01 rna ? GO:0002181 ... P61513 31160784
    522999 6olg:Ap (3.4) BS02 ZN ? GO:0002181 ... P61513 31160784
    523000 6olg:Aq (3.4) BS01 rna ? GO:0003735 ... P30050 31160784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).