SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    523001 6olg:At (3.4) BS01 rna ? GO:0003735 ... P46779 31160784
    523002 6olg:Au (3.4) BS01 rna ? GO:0002181 ... P62906 31160784
    523003 6olg:BA (3.4) BS01 rna ? GO:0003735 ... P08865 31160784
    523004 6olg:BB (3.4) BS01 rna ? GO:0003735 ... P61247 31160784
    523005 6olg:BC (3.4) BS01 rna ? GO:0003723 ... P15880 31160784
    523006 6olg:BD (3.4) BS01 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523007 6olg:BD (3.4) BS02 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523008 6olg:BE (3.4) BS01 rna ? GO:0003723 ... P22090 31160784
    523009 6olg:BF (3.4) BS01 rna ? GO:0000028 ... P46782 31160784
    523010 6olg:BG (3.4) BS01 rna ? GO:0000082 ... P62753 31160784
    523011 6olg:BH (3.4) BS01 rna ? GO:0001843 ... P62081 31160784
    523012 6olg:BI (3.4) BS01 rna ? GO:0000462 ... P62241 31160784
    523013 6olg:BI (3.4) BS02 rna ? GO:0000462 ... P62241 31160784
    523014 6olg:BJ (3.4) BS01 rna ? GO:0002181 ... P46781 31160784
    523015 6olg:BK (3.4) BS01 rna ? N/A P46783 31160784
    523016 6olg:BL (3.4) BS01 rna ? GO:0002181 ... P62280 31160784
    523017 6olg:BM (3.4) BS01 rna ? GO:0002181 ... P25398 31160784
    523018 6olg:BN (3.4) BS01 rna ? GO:0002181 ... P62277 31160784
    523019 6olg:BN (3.4) BS02 rna ? GO:0002181 ... P62277 31160784
    523020 6olg:BO (3.4) BS01 rna ? GO:0000028 ... P62263 31160784
    523021 6olg:BP (3.4) BS01 rna ? GO:0003723 ... P62841 31160784
    523022 6olg:BQ (3.4) BS01 rna ? GO:0000462 ... P62249 31160784
    523023 6olg:BR (3.4) BS01 rna ? GO:0002181 ... P08708 31160784
    523024 6olg:BS (3.4) BS01 rna ? GO:0002181 ... P62269 31160784
    523025 6olg:BS (3.4) BS02 rna ? GO:0002181 ... P62269 31160784
    523026 6olg:BT (3.4) BS01 rna ? GO:0000028 ... P39019 31160784
    523027 6olg:BU (3.4) BS01 rna ? GO:0003723 ... P60866 31160784
    523028 6olg:BW (3.4) BS01 rna ? GO:0002181 ... P62244 31160784
    523029 6olg:BX (3.4) BS01 rna ? GO:0002181 ... P62266 31160784
    523030 6olg:BY (3.4) BS01 rna ? GO:0002181 ... P62847 31160784
    523031 6olg:BZ (3.4) BS01 rna ? N/A P62851 31160784
    523032 6olg:Ba (3.4) BS01 rna ? GO:0003735 ... P62854 31160784
    523033 6olg:Ba (3.4) BS02 ZN ? GO:0003735 ... P62854 31160784
    523034 6olg:Bb (3.4) BS01 rna ? GO:0000028 ... P42677 31160784
    523035 6olg:Bc (3.4) BS01 rna ? GO:0000028 ... P62857 31160784
    523036 6olg:Bd (3.4) BS01 rna ? GO:0002181 ... P62273 31160784
    523037 6olg:Bd (3.4) BS02 ZN ? GO:0002181 ... P62273 31160784
    523038 6olg:Be (3.4) BS01 rna ? GO:0003735 ... P62861 31160784
    523039 6olg:Bf (3.4) BS01 rna ? GO:0003735 ... P62979 31160784
    523040 6olg:Bg (3.4) BS01 rna ? GO:0001891 ... P63244 31160784
    523041 6oli:A (3.5) BS01 rna ? GO:0002181 ... P62917 31160784
    523042 6oli:B (3.5) BS01 rna ? GO:0002181 ... P39023 31160784
    523043 6oli:C (3.5) BS01 rna ? GO:0003735 ... P36578 31160784
    523044 6oli:C (3.5) BS02 rna ? GO:0003735 ... P36578 31160784
    523045 6oli:F (3.5) BS01 rna ? GO:0000027 ... P46777 31160784
    523046 6oli:F (3.5) BS02 rna ? GO:0000027 ... P46777 31160784
    523047 6oli:G (3.5) BS01 rna ? GO:0003735 ... Q02878 31160784
    523048 6oli:H (3.5) BS01 rna ? GO:0000463 ... P18124 31160784
    523049 6oli:H (3.5) BS02 rna ? GO:0000463 ... P18124 31160784
    523050 6oli:I (3.5) BS01 rna ? GO:0003723 ... P62424 31160784
    523051 6oli:I (3.5) BS02 rna ? GO:0003723 ... P62424 31160784
    523052 6oli:J (3.5) BS01 rna ? GO:0002181 ... P32969 31160784
    523053 6oli:K (3.5) BS01 rna ? GO:0000122 ... P27635 31160784
    523054 6oli:K (3.5) BS02 rna ? GO:0000122 ... P27635 31160784
    523055 6oli:K (3.5) BS03 rna ? GO:0000122 ... P27635 31160784
    523056 6oli:L (3.5) BS01 rna ? GO:0000027 ... P62913 31160784
    523057 6oli:L (3.5) BS02 rna ? GO:0000027 ... P62913 31160784
    523058 6oli:M (3.5) BS01 rna ? GO:0001824 ... P26373 31160784
    523059 6oli:M (3.5) BS02 rna ? GO:0001824 ... P26373 31160784
    523060 6oli:N (3.5) BS01 rna ? GO:0003723 ... P50914 31160784
    523061 6oli:O (3.5) BS01 rna ? GO:0002181 ... P61313 31160784
    523062 6oli:O (3.5) BS02 rna ? GO:0002181 ... P61313 31160784
    523063 6oli:P (3.5) BS01 rna ? GO:0002181 ... P40429 31160784
    523064 6oli:Q (3.5) BS01 rna ? GO:0003735 ... P18621 31160784
    523065 6oli:Q (3.5) BS02 rna ? GO:0003735 ... P18621 31160784
    523066 6oli:R (3.5) BS01 rna ? GO:0002181 ... Q07020 31160784
    523067 6oli:S (3.5) BS01 rna ? GO:0002181 ... P84098 31160784
    523068 6oli:S (3.5) BS02 rna ? GO:0002181 ... P84098 31160784
    523069 6oli:SA (3.5) BS01 rna ? GO:0003735 ... P08865 31160784
    523070 6oli:SB (3.5) BS01 rna ? GO:0003735 ... P61247 31160784
    523071 6oli:SB (3.5) BS02 rna ? GO:0003735 ... P61247 31160784
    523072 6oli:SC (3.5) BS01 rna ? GO:0003723 ... P15880 31160784
    523073 6oli:SD (3.5) BS01 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523074 6oli:SE (3.5) BS01 rna ? GO:0002181 ... P62701 31160784
    523075 6oli:SF (3.5) BS01 rna ? GO:0000028 ... P46782 31160784
    523076 6oli:SG (3.5) BS01 rna ? GO:0000082 ... P62753 31160784
    523077 6oli:SH (3.5) BS01 rna ? GO:0001843 ... P62081 31160784
    523078 6oli:SI (3.5) BS01 rna ? GO:0000462 ... P62241 31160784
    523079 6oli:SI (3.5) BS02 rna ? GO:0000462 ... P62241 31160784
    523080 6oli:SJ (3.5) BS01 rna ? GO:0002181 ... P46781 31160784
    523081 6oli:SK (3.5) BS01 rna ? N/A P46783 31160784
    523082 6oli:SL (3.5) BS01 rna ? GO:0002181 ... P62280 31160784
    523083 6oli:SM (3.5) BS01 rna ? GO:0003735 ... P25398 31160784
    523084 6oli:SN (3.5) BS01 rna ? GO:0002181 ... P62277 31160784
    523085 6oli:SO (3.5) BS01 rna ? GO:0000028 ... P62263 31160784
    523086 6oli:SP (3.5) BS01 rna ? GO:0003723 ... P62841 31160784
    523087 6oli:SQ (3.5) BS01 rna ? GO:0000462 ... P62249 31160784
    523088 6oli:SR (3.5) BS01 rna ? GO:0002181 ... P08708 31160784
    523089 6oli:SS (3.5) BS01 rna ? GO:0002181 ... P62269 31160784
    523090 6oli:ST (3.5) BS01 rna ? GO:0000028 ... P39019 31160784
    523091 6oli:SU (3.5) BS01 rna ? GO:0003723 ... P60866 31160784
    523092 6oli:SW (3.5) BS01 rna ? GO:0002181 ... P62244 31160784
    523093 6oli:SX (3.5) BS01 rna ? GO:0002181 ... P62266 31160784
    523094 6oli:SY (3.5) BS01 rna ? GO:0002181 ... P62847 31160784
    523095 6oli:SZ (3.5) BS01 rna ? N/A P62851 31160784
    523096 6oli:Sa (3.5) BS01 rna ? GO:0003735 ... P62854 31160784
    523097 6oli:Sa (3.5) BS02 ZN ? GO:0003735 ... P62854 31160784
    523098 6oli:Sb (3.5) BS01 rna ? GO:0000028 ... P42677 31160784
    523099 6oli:Sc (3.5) BS01 rna ? GO:0000028 ... P62857 31160784
    523100 6oli:Sd (3.5) BS01 rna ? GO:0002181 ... P62273 31160784
    523101 6oli:Se (3.5) BS01 rna ? GO:0003735 ... P62861 31160784
    523102 6oli:Sf (3.5) BS01 rna ? GO:0003735 ... P62979 31160784
    523103 6oli:Sf (3.5) BS02 ZN ? GO:0003735 ... P62979 31160784
    523104 6oli:Sg (3.5) BS01 rna ? GO:0001891 ... P63244 31160784
    523105 6oli:T (3.5) BS01 rna ? GO:0002181 ... Q02543 31160784
    523106 6oli:T (3.5) BS02 rna ? GO:0002181 ... Q02543 31160784
    523107 6oli:U (3.5) BS01 rna ? GO:0002181 ... P46778 31160784
    523108 6oli:U (3.5) BS02 rna ? GO:0002181 ... P46778 31160784
    523109 6oli:V (3.5) BS01 rna ? GO:0003735 ... P35268 31160784
    523110 6oli:W (3.5) BS01 rna ? GO:0000122 ... P62829 31160784
    523111 6oli:W (3.5) BS02 rna ? GO:0000122 ... P62829 31160784
    523112 6oli:X (3.5) BS01 rna ? GO:0003735 ... P83731 31160784
    523113 6oli:Y (3.5) BS01 rna ? GO:0003735 ... P62750 31160784
    523114 6oli:Y (3.5) BS02 rna ? GO:0003735 ... P62750 31160784
    523115 6oli:Z (3.5) BS01 rna ? GO:0002181 ... P61254 31160784
    523116 6oli:Z (3.5) BS02 rna ? GO:0002181 ... P61254 31160784
    523117 6oli:a (3.5) BS01 rna ? GO:0002181 ... P61353 31160784
    523118 6oli:b (3.5) BS01 rna ? GO:0002181 ... P46776 31160784
    523119 6oli:c (3.5) BS01 rna ? GO:0003735 ... P47914 31160784
    523120 6oli:d (3.5) BS01 rna ? GO:0002181 ... P62888 31160784
    523121 6oli:d (3.5) BS02 rna ? GO:0002181 ... P62888 31160784
    523122 6oli:e (3.5) BS01 rna ? GO:0003735 ... P62899 31160784
    523123 6oli:f (3.5) BS01 rna ? GO:0002181 ... P62910 31160784
    523124 6oli:g (3.5) BS01 rna ? GO:0000049 ... P18077 31160784
    523125 6oli:h (3.5) BS01 rna ? GO:0002181 ... P49207 31160784
    523126 6oli:i (3.5) BS01 rna ? GO:0000463 ... P42766 31160784
    523127 6oli:i (3.5) BS02 rna ? GO:0000463 ... P42766 31160784
    523128 6oli:j (3.5) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    523129 6oli:k (3.5) BS01 rna ? GO:0003735 ... P61927 31160784
    523130 6oli:k (3.5) BS02 rna ? GO:0003735 ... P61927 31160784
    523131 6oli:k (3.5) BS03 ZN ? GO:0003735 ... P61927 31160784
    523132 6oli:l (3.5) BS01 rna ? GO:0001501 ... P63173 31160784
    523133 6oli:m (3.5) BS01 rna ? GO:0002181 ... P62891 31160784
    523134 6oli:m (3.5) BS02 rna ? GO:0002181 ... P62891 31160784
    523135 6oli:n (3.5) BS01 rna ? GO:0003735 ... P62987 31160784
    523136 6oli:p (3.5) BS01 rna ? GO:0002181 ... P83881 31160784
    523137 6oli:p (3.5) BS02 rna ? GO:0002181 ... P83881 31160784
    523138 6oli:p (3.5) BS03 ZN ? GO:0002181 ... P83881 31160784
    523139 6oli:q (3.5) BS01 rna ? GO:0002181 ... P61513 31160784
    523140 6oli:q (3.5) BS02 ZN ? GO:0002181 ... P61513 31160784
    523141 6oli:r (3.5) BS01 rna ? GO:0003735 ... P46779 31160784
    523142 6olm:A (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523143 6olm:B (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523144 6olm:C (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523145 6olm:D (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523146 6olm:E (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523147 6olm:F (4.4) BS01 ATP ? GO:0005524 ... Q39VU6 31729381
    523148 6olp:C (4.2) BS01 FUC N/A GO:0019031 ... N/A 31306470
    523149 6olp:G (4.2) BS01 GAL N/A N/A N/A 31306470
    523150 6olp:H (4.2) BS01 GAL N/A N/A N/A 31306470
    523151 6olp:H (4.2) BS02 GAL N/A N/A N/A 31306470
    523152 6olp:I (4.2) BS01 GAL N/A N/A N/A 31306470
    523153 6olt:A (2.35) BS01 MRJ 2.3.1.179 GO:0004315 ... P0AAI5 32265440
    523154 6olx:A (1.43761) BS01 KFY 3.6.4.10 GO:0005524 ... P07900 31141217 MOAD: Kd=4.15uM
    523155 6oly:A (3.112) BS01 CA ? GO:0005886 ... O27564 31772184
    523156 6oly:A (3.112) BS02 CA ? GO:0005886 ... O27564 31772184
    523157 6oly:B (3.112) BS01 CA ? GO:0005886 ... O27564 31772184
    523158 6oly:B (3.112) BS02 CA ? GO:0005886 ... O27564 31772184
    523159 6oly:C (3.112) BS01 CA ? GO:0005886 ... O27564 31772184
    523160 6oly:C (3.112) BS02 CA ? GO:0005886 ... O27564 31772184
    523161 6oly:D (3.112) BS01 CA ? GO:0005886 ... O27564 31772184
    523162 6oly:D (3.112) BS02 CA ? GO:0005886 ... O27564 31772184
    523163 6olz:AA (3.9) BS01 rna ? GO:0002181 ... P62917 31160784
    523164 6olz:AA (3.9) BS02 rna ? GO:0002181 ... P62917 31160784
    523165 6olz:AB (3.9) BS01 rna ? GO:0002181 ... P39023 31160784
    523166 6olz:AC (3.9) BS01 rna ? GO:0003735 ... P36578 31160784
    523167 6olz:AC (3.9) BS02 rna ? GO:0003735 ... P36578 31160784
    523168 6olz:AC (3.9) BS03 peptide ? GO:0003735 ... P36578 31160784
    523169 6olz:AD (3.9) BS01 rna ? GO:0000027 ... P46777 31160784
    523170 6olz:AD (3.9) BS02 rna ? GO:0000027 ... P46777 31160784
    523171 6olz:AE (3.9) BS01 rna ? GO:0003735 ... Q02878 31160784
    523172 6olz:AF (3.9) BS01 rna ? GO:0000463 ... P18124 31160784
    523173 6olz:AF (3.9) BS02 rna ? GO:0000463 ... P18124 31160784
    523174 6olz:AG (3.9) BS01 rna ? GO:0003723 ... P62424 31160784
    523175 6olz:AG (3.9) BS02 rna ? GO:0003723 ... P62424 31160784
    523176 6olz:AH (3.9) BS01 rna ? GO:0002181 ... P32969 31160784
    523177 6olz:AI (3.9) BS01 rna ? GO:0000122 ... P27635 31160784
    523178 6olz:AI (3.9) BS02 rna ? GO:0000122 ... P27635 31160784
    523179 6olz:AI (3.9) BS03 rna ? GO:0000122 ... P27635 31160784
    523180 6olz:AJ (3.9) BS01 rna ? GO:0000027 ... P62913 31160784
    523181 6olz:AJ (3.9) BS02 rna ? GO:0000027 ... P62913 31160784
    523182 6olz:AJ (3.9) BS03 rna ? GO:0000027 ... P62913 31160784
    523183 6olz:AL (3.9) BS01 rna ? GO:0001824 ... P26373 31160784
    523184 6olz:AL (3.9) BS02 rna ? GO:0001824 ... P26373 31160784
    523185 6olz:AM (3.9) BS01 rna ? GO:0003723 ... P50914 31160784
    523186 6olz:AN (3.9) BS01 rna ? GO:0002181 ... P61313 31160784
    523187 6olz:AN (3.9) BS02 rna ? GO:0002181 ... P61313 31160784
    523188 6olz:AO (3.9) BS01 rna ? GO:0002181 ... P40429 31160784
    523189 6olz:AP (3.9) BS01 rna ? GO:0003735 ... P18621 31160784
    523190 6olz:AP (3.9) BS02 rna ? GO:0003735 ... P18621 31160784
    523191 6olz:AQ (3.9) BS01 rna ? GO:0002181 ... Q07020 31160784
    523192 6olz:AR (3.9) BS01 rna ? GO:0002181 ... P84098 31160784
    523193 6olz:AR (3.9) BS02 rna ? GO:0002181 ... P84098 31160784
    523194 6olz:AS (3.9) BS01 rna ? GO:0002181 ... Q02543 31160784
    523195 6olz:AS (3.9) BS02 rna ? GO:0002181 ... Q02543 31160784
    523196 6olz:AT (3.9) BS01 rna ? GO:0002181 ... P46778 31160784
    523197 6olz:AT (3.9) BS02 rna ? GO:0002181 ... P46778 31160784
    523198 6olz:AU (3.9) BS01 rna ? GO:0003735 ... P35268 31160784
    523199 6olz:AV (3.9) BS01 rna ? GO:0000122 ... P62829 31160784
    523200 6olz:AW (3.9) BS01 rna ? GO:0003735 ... P83731 31160784

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).