SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    523201 6olz:AW (3.9) BS02 rna ? GO:0003735 ... P83731 31160784
    523202 6olz:AX (3.9) BS01 rna ? GO:0003735 ... P62750 31160784
    523203 6olz:AX (3.9) BS02 rna ? GO:0003735 ... P62750 31160784
    523204 6olz:AY (3.9) BS01 rna ? GO:0003723 ... P61254 31160784
    523205 6olz:AY (3.9) BS02 rna ? GO:0003723 ... P61254 31160784
    523206 6olz:AZ (3.9) BS01 rna ? GO:0002181 ... P61353 31160784
    523207 6olz:Aa (3.9) BS01 rna ? GO:0002181 ... P46776 31160784
    523208 6olz:Ab (3.9) BS01 rna ? GO:0003735 ... P47914 31160784
    523209 6olz:Ac (3.9) BS01 rna ? GO:0002181 ... P62888 31160784
    523210 6olz:Ad (3.9) BS01 rna ? GO:0003735 ... P62899 31160784
    523211 6olz:Ae (3.9) BS01 rna ? GO:0002181 ... P62910 31160784
    523212 6olz:Af (3.9) BS01 rna ? GO:0000049 ... P18077 31160784
    523213 6olz:Ag (3.9) BS01 rna ? GO:0002181 ... P49207 31160784
    523214 6olz:Ah (3.9) BS01 rna ? GO:0000463 ... P42766 31160784
    523215 6olz:Ah (3.9) BS02 rna ? GO:0000463 ... P42766 31160784
    523216 6olz:Ai (3.9) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    523217 6olz:Aj (3.9) BS01 rna ? GO:0003735 ... P61927 31160784
    523218 6olz:Aj (3.9) BS02 rna ? GO:0003735 ... P61927 31160784
    523219 6olz:Aj (3.9) BS03 ZN ? GO:0003735 ... P61927 31160784
    523220 6olz:Ak (3.9) BS01 rna ? GO:0001501 ... P63173 31160784
    523221 6olz:Al (3.9) BS01 rna ? GO:0002181 ... P62891 31160784
    523222 6olz:Al (3.9) BS02 rna ? GO:0002181 ... P62891 31160784
    523223 6olz:Al (3.9) BS03 MG ? GO:0002181 ... P62891 31160784
    523224 6olz:Am (3.9) BS01 rna ? GO:0003735 ... P62987 31160784
    523225 6olz:Ao (3.9) BS01 rna ? GO:0002181 ... P83881 31160784
    523226 6olz:Ao (3.9) BS02 rna ? GO:0002181 ... P83881 31160784
    523227 6olz:Ao (3.9) BS03 ZN ? GO:0002181 ... P83881 31160784
    523228 6olz:Ap (3.9) BS01 rna ? GO:0002181 ... P61513 31160784
    523229 6olz:Ap (3.9) BS02 ZN ? GO:0002181 ... P61513 31160784
    523230 6olz:At (3.9) BS01 rna ? GO:0003735 ... P46779 31160784
    523231 6olz:BA (3.9) BS01 rna ? GO:0003735 ... P08865 31160784
    523232 6olz:BB (3.9) BS01 rna ? GO:0003735 ... P61247 31160784
    523233 6olz:BC (3.9) BS01 rna ? GO:0003723 ... P15880 31160784
    523234 6olz:BD (3.9) BS01 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523235 6olz:BD (3.9) BS02 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523236 6olz:BE (3.9) BS01 rna ? GO:0003723 ... P22090 31160784
    523237 6olz:BF (3.9) BS01 rna ? GO:0000028 ... P46782 31160784
    523238 6olz:BG (3.9) BS01 rna ? GO:0000082 ... P62753 31160784
    523239 6olz:BH (3.9) BS01 rna ? GO:0001843 ... P62081 31160784
    523240 6olz:BI (3.9) BS01 rna ? GO:0000462 ... P62241 31160784
    523241 6olz:BI (3.9) BS02 rna ? GO:0000462 ... P62241 31160784
    523242 6olz:BI (3.9) BS03 MG ? GO:0000462 ... P62241 31160784
    523243 6olz:BJ (3.9) BS01 rna ? GO:0002181 ... P46781 31160784
    523244 6olz:BK (3.9) BS01 rna ? N/A P46783 31160784
    523245 6olz:BL (3.9) BS01 rna ? GO:0002181 ... P62280 31160784
    523246 6olz:BM (3.9) BS01 rna ? GO:0002181 ... P25398 31160784
    523247 6olz:BN (3.9) BS01 rna ? GO:0002181 ... P62277 31160784
    523248 6olz:BO (3.9) BS01 rna ? GO:0000028 ... P62263 31160784
    523249 6olz:BP (3.9) BS01 rna ? GO:0003723 ... P62841 31160784
    523250 6olz:BQ (3.9) BS01 rna ? GO:0000462 ... P62249 31160784
    523251 6olz:BR (3.9) BS01 rna ? GO:0002181 ... P08708 31160784
    523252 6olz:BS (3.9) BS01 rna ? GO:0002181 ... P62269 31160784
    523253 6olz:BS (3.9) BS02 rna ? GO:0002181 ... P62269 31160784
    523254 6olz:BT (3.9) BS01 rna ? GO:0000028 ... P39019 31160784
    523255 6olz:BU (3.9) BS01 rna ? GO:0003723 ... P60866 31160784
    523256 6olz:BV (3.9) BS01 rna ? GO:0000447 ... P63220 31160784
    523257 6olz:BW (3.9) BS01 rna ? GO:0002181 ... P62244 31160784
    523258 6olz:BX (3.9) BS01 rna ? GO:0002181 ... P62266 31160784
    523259 6olz:BX (3.9) BS02 rna ? GO:0002181 ... P62266 31160784
    523260 6olz:BY (3.9) BS01 rna ? GO:0002181 ... P62847 31160784
    523261 6olz:BZ (3.9) BS01 rna ? N/A P62851 31160784
    523262 6olz:Ba (3.9) BS01 rna ? GO:0003735 ... P62854 31160784
    523263 6olz:Ba (3.9) BS02 ZN ? GO:0003735 ... P62854 31160784
    523264 6olz:Bb (3.9) BS01 rna ? GO:0000028 ... P42677 31160784
    523265 6olz:Bc (3.9) BS01 rna ? GO:0000028 ... P62857 31160784
    523266 6olz:Bd (3.9) BS01 rna ? GO:0002181 ... P62273 31160784
    523267 6olz:Bd (3.9) BS02 ZN ? GO:0002181 ... P62273 31160784
    523268 6olz:Be (3.9) BS01 rna ? GO:0003735 ... P62861 31160784
    523269 6olz:Bf (3.9) BS01 rna ? GO:0003735 ... P62979 31160784
    523270 6olz:Bg (3.9) BS01 rna ? GO:0001891 ... P63244 31160784
    523271 6om0:A (3.1) BS01 rna ? GO:0002181 ... P62917 31160784
    523272 6om0:B (3.1) BS01 rna ? GO:0002181 ... P39023 31160784
    523273 6om0:C (3.1) BS01 rna ? GO:0003735 ... P36578 31160784
    523274 6om0:C (3.1) BS02 rna ? GO:0003735 ... P36578 31160784
    523275 6om0:C (3.1) BS03 peptide ? GO:0003735 ... P36578 31160784
    523276 6om0:F (3.1) BS01 rna ? GO:0000027 ... P46777 31160784
    523277 6om0:F (3.1) BS02 rna ? GO:0000027 ... P46777 31160784
    523278 6om0:G (3.1) BS01 rna ? GO:0003735 ... Q02878 31160784
    523279 6om0:H (3.1) BS01 rna ? GO:0000463 ... P18124 31160784
    523280 6om0:H (3.1) BS02 rna ? GO:0000463 ... P18124 31160784
    523281 6om0:I (3.1) BS01 rna ? GO:0003723 ... P62424 31160784
    523282 6om0:I (3.1) BS02 rna ? GO:0003723 ... P62424 31160784
    523283 6om0:J (3.1) BS01 rna ? GO:0002181 ... P32969 31160784
    523284 6om0:K (3.1) BS01 rna ? GO:0000122 ... P27635 31160784
    523285 6om0:K (3.1) BS02 rna ? GO:0000122 ... P27635 31160784
    523286 6om0:K (3.1) BS03 rna ? GO:0000122 ... P27635 31160784
    523287 6om0:L (3.1) BS01 rna ? GO:0000027 ... P62913 31160784
    523288 6om0:L (3.1) BS02 rna ? GO:0000027 ... P62913 31160784
    523289 6om0:M (3.1) BS01 rna ? GO:0001824 ... P26373 31160784
    523290 6om0:M (3.1) BS02 rna ? GO:0001824 ... P26373 31160784
    523291 6om0:N (3.1) BS01 rna ? GO:0003723 ... P50914 31160784
    523292 6om0:O (3.1) BS01 rna ? GO:0002181 ... P61313 31160784
    523293 6om0:O (3.1) BS02 rna ? GO:0002181 ... P61313 31160784
    523294 6om0:P (3.1) BS01 rna ? GO:0002181 ... P40429 31160784
    523295 6om0:Q (3.1) BS01 rna ? GO:0003735 ... P18621 31160784
    523296 6om0:Q (3.1) BS02 rna ? GO:0003735 ... P18621 31160784
    523297 6om0:R (3.1) BS01 rna ? GO:0002181 ... Q07020 31160784
    523298 6om0:S (3.1) BS01 rna ? GO:0002181 ... P84098 31160784
    523299 6om0:S (3.1) BS02 rna ? GO:0002181 ... P84098 31160784
    523300 6om0:SA (3.1) BS01 rna ? GO:0003735 ... P08865 31160784
    523301 6om0:SB (3.1) BS01 rna ? GO:0003735 ... P61247 31160784
    523302 6om0:SB (3.1) BS02 rna ? GO:0003735 ... P61247 31160784
    523303 6om0:SC (3.1) BS01 rna ? GO:0003723 ... P15880 31160784
    523304 6om0:SD (3.1) BS01 rna 4.2.99.18 GO:0000977 ... P23396 31160784
    523305 6om0:SE (3.1) BS01 rna ? GO:0002181 ... P62701 31160784
    523306 6om0:SF (3.1) BS01 rna ? GO:0000028 ... P46782 31160784
    523307 6om0:SG (3.1) BS01 rna ? GO:0000082 ... P62753 31160784
    523308 6om0:SH (3.1) BS01 rna ? GO:0001843 ... P62081 31160784
    523309 6om0:SI (3.1) BS01 rna ? GO:0000462 ... P62241 31160784
    523310 6om0:SI (3.1) BS02 rna ? GO:0000462 ... P62241 31160784
    523311 6om0:SJ (3.1) BS01 rna ? GO:0002181 ... P46781 31160784
    523312 6om0:SK (3.1) BS01 rna ? N/A P46783 31160784
    523313 6om0:SL (3.1) BS01 rna ? GO:0002181 ... P62280 31160784
    523314 6om0:SM (3.1) BS01 rna ? GO:0003735 ... P25398 31160784
    523315 6om0:SN (3.1) BS01 rna ? GO:0002181 ... P62277 31160784
    523316 6om0:SN (3.1) BS02 rna ? GO:0002181 ... P62277 31160784
    523317 6om0:SO (3.1) BS01 rna ? GO:0000028 ... P62263 31160784
    523318 6om0:SP (3.1) BS01 rna ? GO:0003723 ... P62841 31160784
    523319 6om0:SP (3.1) BS02 rna ? GO:0003723 ... P62841 31160784
    523320 6om0:SQ (3.1) BS01 rna ? GO:0000462 ... P62249 31160784
    523321 6om0:SR (3.1) BS01 rna ? GO:0002181 ... P08708 31160784
    523322 6om0:SS (3.1) BS01 rna ? GO:0002181 ... P62269 31160784
    523323 6om0:ST (3.1) BS01 rna ? GO:0000028 ... P39019 31160784
    523324 6om0:SU (3.1) BS01 rna ? GO:0003723 ... P60866 31160784
    523325 6om0:SV (3.1) BS01 rna ? GO:0000447 ... P63220 31160784
    523326 6om0:SW (3.1) BS01 rna ? GO:0002181 ... P62244 31160784
    523327 6om0:SX (3.1) BS01 rna ? GO:0002181 ... P62266 31160784
    523328 6om0:SY (3.1) BS01 rna ? GO:0002181 ... P62847 31160784
    523329 6om0:SZ (3.1) BS01 rna ? N/A P62851 31160784
    523330 6om0:Sa (3.1) BS01 rna ? GO:0003735 ... P62854 31160784
    523331 6om0:Sb (3.1) BS01 rna ? GO:0000028 ... P42677 31160784
    523332 6om0:Sc (3.1) BS01 rna ? GO:0000028 ... P62857 31160784
    523333 6om0:Sd (3.1) BS01 rna ? GO:0002181 ... P62273 31160784
    523334 6om0:Se (3.1) BS01 rna ? GO:0003735 ... P62861 31160784
    523335 6om0:Sf (3.1) BS01 rna ? GO:0003735 ... P62979 31160784
    523336 6om0:Sf (3.1) BS02 ZN ? GO:0003735 ... P62979 31160784
    523337 6om0:Sg (3.1) BS01 rna ? GO:0001891 ... P63244 31160784
    523338 6om0:T (3.1) BS01 rna ? GO:0002181 ... Q02543 31160784
    523339 6om0:T (3.1) BS02 rna ? GO:0002181 ... Q02543 31160784
    523340 6om0:U (3.1) BS01 rna ? GO:0002181 ... P46778 31160784
    523341 6om0:U (3.1) BS02 rna ? GO:0002181 ... P46778 31160784
    523342 6om0:V (3.1) BS01 rna ? GO:0003735 ... P35268 31160784
    523343 6om0:W (3.1) BS01 rna ? GO:0000122 ... P62829 31160784
    523344 6om0:W (3.1) BS02 rna ? GO:0000122 ... P62829 31160784
    523345 6om0:X (3.1) BS01 rna ? GO:0003735 ... P83731 31160784
    523346 6om0:Y (3.1) BS01 rna ? GO:0003735 ... P62750 31160784
    523347 6om0:Y (3.1) BS02 rna ? GO:0003735 ... P62750 31160784
    523348 6om0:Z (3.1) BS01 rna ? GO:0002181 ... P61254 31160784
    523349 6om0:Z (3.1) BS02 rna ? GO:0002181 ... P61254 31160784
    523350 6om0:a (3.1) BS01 rna ? GO:0002181 ... P61353 31160784
    523351 6om0:b (3.1) BS01 rna ? GO:0002181 ... P46776 31160784
    523352 6om0:c (3.1) BS01 rna ? GO:0003735 ... P47914 31160784
    523353 6om0:d (3.1) BS01 rna ? GO:0002181 ... P62888 31160784
    523354 6om0:d (3.1) BS02 rna ? GO:0002181 ... P62888 31160784
    523355 6om0:e (3.1) BS01 rna ? GO:0003735 ... P62899 31160784
    523356 6om0:f (3.1) BS01 rna ? GO:0002181 ... P62910 31160784
    523357 6om0:g (3.1) BS01 rna ? GO:0000049 ... P18077 31160784
    523358 6om0:h (3.1) BS01 rna ? GO:0002181 ... P49207 31160784
    523359 6om0:i (3.1) BS01 rna ? GO:0000463 ... P42766 31160784
    523360 6om0:i (3.1) BS02 rna ? GO:0000463 ... P42766 31160784
    523361 6om0:j (3.1) BS01 rna ? GO:0002181 ... Q9Y3U8 31160784
    523362 6om0:k (3.1) BS01 rna ? GO:0003735 ... P61927 31160784
    523363 6om0:k (3.1) BS02 rna ? GO:0003735 ... P61927 31160784
    523364 6om0:k (3.1) BS03 ZN ? GO:0003735 ... P61927 31160784
    523365 6om0:l (3.1) BS01 rna ? GO:0001501 ... P63173 31160784
    523366 6om0:m (3.1) BS01 rna ? GO:0002181 ... P62891 31160784
    523367 6om0:m (3.1) BS02 rna ? GO:0002181 ... P62891 31160784
    523368 6om0:m (3.1) BS03 peptide ? GO:0002181 ... P62891 31160784
    523369 6om0:n (3.1) BS01 rna ? GO:0003735 ... P62987 31160784
    523370 6om0:p (3.1) BS01 rna ? GO:0002181 ... P83881 31160784
    523371 6om0:p (3.1) BS02 rna ? GO:0002181 ... P83881 31160784
    523372 6om0:p (3.1) BS03 ZN ? GO:0002181 ... P83881 31160784
    523373 6om0:q (3.1) BS01 rna ? GO:0002181 ... P61513 31160784
    523374 6om0:q (3.1) BS02 ZN ? GO:0002181 ... P61513 31160784
    523375 6om0:r (3.1) BS01 rna ? GO:0003735 ... P46779 31160784
    523376 6om1:A (2.66) BS01 CA ? GO:0007155 ... P06756 31792290
    523377 6om1:A (2.66) BS02 CA ? GO:0007155 ... P06756 31792290
    523378 6om1:A (2.66) BS03 CA ? GO:0007155 ... P06756 31792290
    523379 6om1:A (2.66) BS04 CA ? GO:0007155 ... P06756 31792290
    523380 6om1:B (2.66) BS01 MG ? N/A P26012 31792290
    523381 6om1:B (2.66) BS02 CA ? N/A P26012 31792290
    523382 6om1:C (2.66) BS01 CA ? GO:0007155 ... P06756 31792290
    523383 6om1:C (2.66) BS02 CA ? GO:0007155 ... P06756 31792290
    523384 6om1:C (2.66) BS03 CA ? GO:0007155 ... P06756 31792290
    523385 6om1:C (2.66) BS04 CA ? GO:0007155 ... P06756 31792290
    523386 6om1:D (2.66) BS01 MG ? N/A P26012 31792290
    523387 6om1:D (2.66) BS02 CA ? N/A P26012 31792290
    523388 6om1:E (2.66) BS01 CA ? GO:0007155 ... P06756 31792290
    523389 6om1:E (2.66) BS02 CA ? GO:0007155 ... P06756 31792290
    523390 6om1:E (2.66) BS03 CA ? GO:0007155 ... P06756 31792290
    523391 6om1:E (2.66) BS04 CA ? GO:0007155 ... P06756 31792290
    523392 6om1:F (2.66) BS01 MG ? N/A P26012 31792290
    523393 6om1:F (2.66) BS02 CA ? N/A P26012 31792290
    523394 6om1:G (2.66) BS01 CA ? GO:0007155 ... P06756 31792290
    523395 6om1:G (2.66) BS02 CA ? GO:0007155 ... P06756 31792290
    523396 6om1:G (2.66) BS03 CA ? GO:0007155 ... P06756 31792290
    523397 6om1:G (2.66) BS04 CA ? GO:0007155 ... P06756 31792290
    523398 6om1:H (2.66) BS01 MG ? N/A P26012 31792290
    523399 6om1:H (2.66) BS02 CA ? N/A P26012 31792290
    523400 6om2:A (2.77) BS01 peptide ? GO:0007155 ... P06756 31792290

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).