SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    52201 1t9g:A (2.9) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52202 1t9g:B (2.9) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52203 1t9g:B (2.9) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52204 1t9g:C (2.9) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52205 1t9g:C (2.9) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52206 1t9g:D (2.9) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52207 1t9g:D (2.9) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 15159392
    52208 1t9g:S (2.9) BS01 AMP ? GO:0005515 ... P38117 15159392
    52209 1t9h:A (1.6) BS01 ZN 3.6.1.- GO:0000028 ... O34530 15223319
    52210 1t9h:A (1.6) BS02 CA 3.6.1.- GO:0000028 ... O34530 15223319
    52211 1t9i:A (1.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52212 1t9i:A (1.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52213 1t9i:B (1.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52214 1t9i:B (1.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52215 1t9j:A (2.0) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52216 1t9j:A (2.0) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52217 1t9j:B (2.0) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52218 1t9j:B (2.0) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550
    52219 1t9m:A (1.9) BS01 FMN 1.4.-.-
    1.4.3.5
    GO:0004733 ... O69755 15502343
    52220 1t9m:A (1.9) BS02 FMN 1.4.-.-
    1.4.3.5
    GO:0004733 ... O69755 15502343
    52221 1t9m:B (1.9) BS01 FMN 1.4.-.-
    1.4.3.5
    GO:0004733 ... O69755 15502343
    52222 1t9m:B (1.9) BS02 FMN 1.4.-.-
    1.4.3.5
    GO:0004733 ... O69755 15502343
    52223 1t9n:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 15667203
    52224 1t9o:A (2.0) BS01 FE ? GO:0005506 ... P00268 15382226
    52225 1t9o:B (2.0) BS01 FE ? GO:0005506 ... P00268 15382226
    52226 1t9o:C (2.0) BS01 FE ? GO:0005506 ... P00268 15382226
    52227 1t9p:A (1.5) BS01 FE ? GO:0005506 ... P00268 15382226
    52228 1t9p:B (1.5) BS01 FE ? GO:0005506 ... P00268 15382226
    52229 1t9p:C (1.5) BS01 FE ? GO:0005506 ... P00268 15382226
    52230 1t9q:A (1.8) BS01 FE ? GO:0005506 ... P00268 15382226
    52231 1t9r:A (2.1) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 15260978
    52232 1t9s:A (2.0) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 15260978
    52233 1t9s:A (2.0) BS02 5GP 3.1.4.35 GO:0004114 ... O76074 15260978
    52234 1t9s:B (2.0) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 15260978
    52235 1t9s:B (2.0) BS02 5GP 3.1.4.35 GO:0004114 ... O76074 15260978
    52236 1t9u:A (3.11) BS01 CPF ? GO:0005515 ... P31224 16166543
    52237 1t9u:A (3.11) BS02 CPF ? GO:0005515 ... P31224 16166543
    52238 1t9v:A (3.8) BS01 RHQ ? GO:0005515 ... P31224 16166543
    52239 1t9w:A (3.23) BS01 NFN ? GO:0005515 ... P31224 16166543
    52240 1t9w:A (3.23) BS02 NFN ? GO:0005515 ... P31224 16166543
    52241 1t9x:A (3.08) BS01 ET ? GO:0005515 ... P31224 16166543
    52242 1t9y:A (3.64) BS01 MC2 ? GO:0005515 ... P31224 16166543
    52243 1t9y:A (3.64) BS02 MC2 ? GO:0005515 ... P31224 16166543
    52244 1t9z:A (2.3) BS01 MG 3.1.3.16 GO:0008420 ... Q9GZU7 15304220
    52245 1ta0:A (2.1) BS01 MG 3.1.3.16 GO:0008420 ... Q9GZU7 15304220
    52246 1ta1:A (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52247 1ta1:A (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52248 1ta1:B (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52249 1ta1:B (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52250 1ta1:C (2.5) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52251 1ta1:C (2.5) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52252 1ta2:A (2.3) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 9703466
    52253 1ta2:A (2.3) BS02 176 3.4.21.5 GO:0004252 ... P00734 9703466 MOAD: Ki=3nM
    BindingDB: Ki=3nM
    52254 1ta4:A (2.28) BS01 ART 1.2.1.11 GO:0004073 ... P44801 15583380
    52255 1ta4:A (2.28) BS02 ART 1.2.1.11 GO:0004073 ... P44801 15583380
    52256 1ta6:A (1.9) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 9703466
    52257 1ta6:A (1.9) BS02 177 3.4.21.5 GO:0004252 ... P00734 9703466 MOAD: Ki=0.74nM
    BindingDB: Ki=0.74nM
    52258 1ta8:A (1.8) BS01 NMN 6.5.1.2 GO:0003911 ... Q837V6 15296738
    52259 1ta9:A (1.9) BS01 ZN 1.1.1.6 GO:0005739 ... O13702 N/A
    52260 1ta9:B (1.9) BS01 ZN 1.1.1.6 GO:0005739 ... O13702 N/A
    52261 1tad:A (1.7) BS01 CA ? GO:0000035 ... P04695 7969474
    52262 1tad:A (1.7) BS02 ALF ? GO:0000035 ... P04695 7969474
    52263 1tad:A (1.7) BS03 GDP ? GO:0000035 ... P04695 7969474
    52264 1tad:B (1.7) BS01 CA ? GO:0000035 ... P04695 7969474
    52265 1tad:B (1.7) BS02 ALF ? GO:0000035 ... P04695 7969474
    52266 1tad:B (1.7) BS03 GDP ? GO:0000035 ... P04695 7969474
    52267 1tad:C (1.7) BS01 CA ? GO:0000035 ... P04695 7969474
    52268 1tad:C (1.7) BS02 ALF ? GO:0000035 ... P04695 7969474
    52269 1tad:C (1.7) BS03 GDP ? GO:0000035 ... P04695 7969474
    52270 1tae:A (2.7) BS01 NAD 6.5.1.2 GO:0003911 ... Q837V6 15296738
    52271 1tae:B (2.7) BS01 NAD 6.5.1.2 GO:0003911 ... Q837V6 15296738
    52272 1tae:C (2.7) BS01 NAD 6.5.1.2 GO:0003911 ... Q837V6 15296738
    52273 1tae:D (2.7) BS01 NAD 6.5.1.2 GO:0003911 ... Q837V6 15296738
    52274 1taf:B (2.0) BS01 ZN ? GO:0000124 ... P49847 8598927
    52275 1tag:A (1.8) BS01 GDP ? GO:0000035 ... P04695 8208289
    52276 1tah:A (3.0) BS01 CA 3.1.1.3 GO:0004806 ... P0DUB8 8405390
    52277 1tah:B (3.0) BS01 CA 3.1.1.3 GO:0004806 ... P0DUB8 8405390
    52278 1tah:C (3.0) BS01 CA 3.1.1.3 GO:0004806 ... P0DUB8 8405390
    52279 1tah:D (3.0) BS01 CA 3.1.1.3 GO:0004806 ... P0DUB8 8405390
    52280 1taq:A (2.4) BS01 ZN 2.7.7.7 GO:0001882 ... P19821 7637814
    52281 1tar:A (2.2) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52282 1tar:B (2.2) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52283 1tas:A (2.8) BS01 PLA 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52284 1tas:A (2.8) BS02 PLA 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52285 1tas:B (2.8) BS01 PLA 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52286 1tas:B (2.8) BS02 PLA 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52287 1tat:A (3.0) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52288 1tat:B (3.0) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 8120903
    52289 1tau:A (3.0) BS01 dna 2.7.7.7 GO:0001882 ... P19821 8717047
    52290 1tau:A (3.0) BS02 dna 2.7.7.7 GO:0001882 ... P19821 8717047
    52291 1tau:A (3.0) BS03 ZN 2.7.7.7 GO:0001882 ... P19821 8717047
    52292 1taw:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9300481
    52293 1taz:A (1.77) BS01 ZN 3.1.4.17 GO:0004114 ... Q01064 15260978
    52294 1tb0:X (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 15667203
    52295 1tb3:A (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52296 1tb3:B (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52297 1tb3:C (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52298 1tb3:D (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52299 1tb3:E (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52300 1tb3:F (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52301 1tb3:G (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52302 1tb3:H (2.3) BS01 FMN 1.1.3.15 GO:0003973 ... Q07523 15683236
    52303 1tb4:A (2.15) BS01 PEJ 1.2.1.11 GO:0004073 ... P44801 15583380 MOAD: Ki=0.2mM
    52304 1tb5:A (2.15) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15260978
    52305 1tb5:A (2.15) BS02 AMP 3.1.4.53 GO:0004114 ... Q07343 15260978
    52306 1tb5:B (2.15) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15260978
    52307 1tb5:B (2.15) BS02 AMP 3.1.4.53 GO:0004114 ... Q07343 15260978
    52308 1tb6:H (2.5) BS01 GU0 3.4.21.5 GO:0004252 ... P00734 15311269
    52309 1tb6:H (2.5) BS02 GU6 3.4.21.5 GO:0004252 ... P00734 15311269
    52310 1tb6:H (2.5) BS03 GU4 3.4.21.5 GO:0004252 ... P00734 15311269
    52311 1tb6:I (2.5) BS01 GU3 ? GO:0002020 ... P01008 15311269
    52312 1tb6:I (2.5) BS02 GU2 ? GO:0002020 ... P01008 15311269
    52313 1tb6:I (2.5) BS03 GU6 ? GO:0002020 ... P01008 15311269
    52314 1tb6:I (2.5) BS04 GU1 ? GO:0002020 ... P01008 15311269
    52315 1tb6:I (2.5) BS05 GU5 ? GO:0002020 ... P01008 15311269
    52316 1tb7:A (1.63) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 15260978
    52317 1tb7:A (1.63) BS02 AMP 3.1.4.53 GO:0004114 ... Q08499 15260978
    52318 1tb7:B (1.63) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 15260978
    52319 1tb7:B (1.63) BS02 AMP 3.1.4.53 GO:0004114 ... Q08499 15260978
    52320 1tbb:A (1.6) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 15260978
    52321 1tbb:A (1.6) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 15260978
    52322 1tbb:B (1.6) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 15260978
    52323 1tbb:B (1.6) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 15260978
    52324 1tbf:A (1.3) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 15260978
    52325 1tbf:A (1.3) BS02 VIA 3.1.4.35 GO:0004114 ... O76074 15260978 BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    52326 1tbh:A (2.7) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52327 1tbh:A (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52328 1tbh:B (2.7) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52329 1tbh:B (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52330 1tbh:C (2.7) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52331 1tbh:C (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52332 1tbj:A (2.8) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52333 1tbj:A (2.8) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52334 1tbj:B (2.8) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52335 1tbj:B (2.8) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52336 1tbj:C (2.8) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52337 1tbj:C (2.8) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52338 1tbl:A (3.1) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52339 1tbl:A (3.1) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52340 1tbl:B (3.1) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52341 1tbl:B (3.1) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52342 1tbl:C (3.1) BS01 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52343 1tbl:C (3.1) BS02 MN 3.5.3.1 GO:0000050 ... P07824 16266687
    52344 1tbn:A (-1.00) BS01 ZN 2.7.11.13 N/A P63319 9271501
    52345 1tbn:A (-1.00) BS02 ZN 2.7.11.13 N/A P63319 9271501
    52346 1tbo:A (-1.00) BS01 ZN 2.7.11.13 N/A P63319 9271501
    52347 1tbo:A (-1.00) BS02 ZN 2.7.11.13 N/A P63319 9271501
    52348 1tbt:X (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 15667203
    52349 1tbw:A (2.15) BS01 AMP ? GO:0005524 ... P41148 15292259
    52350 1tbw:B (2.15) BS01 AMP ? GO:0005524 ... P41148 15292259
    52351 1tbz:H (2.3) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 8913620
    52352 1tbz:H (2.3) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 8913620
    52353 1tbz:H (2.3) BS03 00Q 3.4.21.5 GO:0004252 ... P00734 8913620
    52354 1tc0:A (2.2) BS01 ATP ? GO:0005524 ... P41148 15292259
    52355 1tc0:B (2.2) BS01 ATP ? GO:0005524 ... P41148 15292259
    52356 1tc1:A (1.41) BS01 FMB 2.4.2.8 GO:0000287 ... Q4DRC4 9790669 MOAD: ic50>2mM
    52357 1tc1:B (1.41) BS01 FMB 2.4.2.8 GO:0000287 ... Q4DRC4 9790669 MOAD: ic50>2mM
    52358 1tc2:A (1.81) BS01 7HP 2.4.2.8 GO:0000287 ... Q4DRC4 9860824
    52359 1tc2:A (1.81) BS02 PRP 2.4.2.8 GO:0000287 ... Q4DRC4 9860824
    52360 1tc2:B (1.81) BS01 7HP 2.4.2.8 GO:0000287 ... Q4DRC4 9860824
    52361 1tc2:B (1.81) BS02 PRP 2.4.2.8 GO:0000287 ... Q4DRC4 9860824
    52362 1tc3:C (2.45) BS01 dna ? GO:0003677 ... P34257 9312061
    52363 1tc3:C (2.45) BS02 dna ? GO:0003677 ... P34257 9312061
    52364 1tc6:A (1.87) BS01 ADP ? GO:0005524 ... P41148 15292259
    52365 1tc6:B (1.87) BS01 ADP ? GO:0005524 ... P41148 15292259
    52366 1tc8:A (2.7) BS01 NA 3.1.1.4 GO:0004623 ... Q6SLM2 15659372
    52367 1tc8:A (2.7) BS02 TDA 3.1.1.4 GO:0004623 ... Q6SLM2 15659372
    52368 1tcb:B (2.1) BS01 BOG 3.1.1.3 GO:0004806 ... P41365 8087556
    52369 1tcc:B (2.5) BS01 BOG 3.1.1.3 GO:0004806 ... P41365 8087556
    52370 1tce:A (-1.00) BS01 peptide ? N/A P29353 7544002
    52371 1tcf:A (1.9) BS01 CA ? GO:0005509 ... P02586 10651267
    52372 1tcf:A (1.9) BS02 CA ? GO:0005509 ... P02586 10651267
    52373 1tcf:A (1.9) BS03 CA ? GO:0005509 ... P02586 10651267
    52374 1tcf:A (1.9) BS04 CA ? GO:0005509 ... P02586 10651267
    52375 1tcm:A (2.2) BS01 CA 2.4.1.19 GO:0003824 ... P43379 8955113
    52376 1tcm:A (2.2) BS02 CA 2.4.1.19 GO:0003824 ... P43379 8955113
    52377 1tcm:B (2.2) BS01 CA 2.4.1.19 GO:0003824 ... P43379 8955113
    52378 1tcm:B (2.2) BS02 CA 2.4.1.19 GO:0003824 ... P43379 8955113
    52379 1tco:A (2.5) BS01 ZN 3.1.3.16 GO:0016787 ... P48452 7543369
    52380 1tco:A (2.5) BS02 FE 3.1.3.16 GO:0016787 ... P48452 7543369
    52381 1tco:A (2.5) BS03 FK5 3.1.3.16 GO:0016787 ... P48452 7543369
    52382 1tco:B (2.5) BS01 CA 3.1.3.16 GO:0005509 ... P63099 7543369
    52383 1tco:B (2.5) BS02 CA 3.1.3.16 GO:0005509 ... P63099 7543369
    52384 1tco:B (2.5) BS03 CA 3.1.3.16 GO:0005509 ... P63099 7543369
    52385 1tco:B (2.5) BS04 CA 3.1.3.16 GO:0005509 ... P63099 7543369
    52386 1tco:B (2.5) BS05 FK5 3.1.3.16 GO:0005509 ... P63099 7543369
    52387 1tco:C (2.5) BS01 FK5 5.2.1.8 GO:0000413 ... P18203 7543369
    52388 1tcr:B (2.5) BS01 FUC N/A N/A N/A 8824178
    52389 1tcs:A (1.7) BS01 NDP 3.2.2.22 GO:0017148 ... P09989 7634073
    52390 1tcu:A (2.0) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52391 1tcu:A (2.0) BS02 PO4 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52392 1tcu:B (2.0) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52393 1tcu:B (2.0) BS02 PO4 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52394 1tcu:C (2.0) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52395 1tcu:C (2.0) BS02 PO4 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52396 1tcv:A (1.75) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52397 1tcv:A (1.75) BS02 NDS 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52398 1tcv:B (1.75) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52399 1tcv:B (1.75) BS02 NDS 2.4.2.1 GO:0003824 ... Q9BMI9 16182308
    52400 1tcv:C (1.75) BS01 ACT 2.4.2.1 GO:0003824 ... Q9BMI9 16182308

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).