SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    524001 6op6:A (1.25) BS03 ZN 3.5.2.6 GO:0046872 ... A0A344X7M2 31744917
    524002 6op7:A (1.37) BS01 ZN 3.5.2.6 GO:0046872 ... A0A344X7M2 31744917
    524003 6op9:A (2.501) BS01 DB8 2.7.10.1 GO:0004672 ... P21860 35108525 BindingDB: Kd=0.770000nM
    524004 6opa:F (4.084) BS01 MAN N/A N/A N/A 32518821
    524005 6opa:I (4.084) BS01 MAN N/A N/A N/A 32518821
    524006 6opa:K (4.084) BS01 BMA N/A N/A N/A 32518821
    524007 6opb:E (2.0) BS01 DCR ? GO:0005549 ... Q1HRL7 32094450
    524008 6opb:F (2.0) BS01 DCR ? GO:0005549 ... Q1HRL7 32094450
    524009 6opb:I (2.0) BS01 DCR ? GO:0005549 ... Q1HRL7 32094450
    524010 6opc:A (3.7) BS01 peptide 3.6.4.6 GO:0000837 ... P25694 31249134
    524011 6opc:A (3.7) BS02 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524012 6opc:A (3.7) BS03 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524013 6opc:A (3.7) BS04 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524014 6opc:A (3.7) BS05 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524015 6opc:B (3.7) BS01 peptide 3.6.4.6 GO:0000837 ... P25694 31249134
    524016 6opc:B (3.7) BS02 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524017 6opc:B (3.7) BS03 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524018 6opc:B (3.7) BS04 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524019 6opc:C (3.7) BS01 peptide 3.6.4.6 GO:0000837 ... P25694 31249134
    524020 6opc:C (3.7) BS02 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524021 6opc:C (3.7) BS03 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524022 6opc:C (3.7) BS04 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524023 6opc:C (3.7) BS05 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524024 6opc:C (3.7) BS06 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524025 6opc:D (3.7) BS01 peptide 3.6.4.6 GO:0000837 ... P25694 31249134
    524026 6opc:D (3.7) BS02 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524027 6opc:D (3.7) BS03 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524028 6opc:D (3.7) BS04 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524029 6opc:D (3.7) BS05 BEF 3.6.4.6 GO:0000837 ... P25694 31249134
    524030 6opc:E (3.7) BS01 peptide 3.6.4.6 GO:0000837 ... P25694 31249134
    524031 6opc:E (3.7) BS02 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524032 6opc:E (3.7) BS03 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524033 6opc:E (3.7) BS04 ADP 3.6.4.6 GO:0000837 ... P25694 31249134
    524034 6opd:A (1.791) BS01 peptide ? N/A P04439 31555277
    524035 6opd:A (1.791) BS02 MG ? N/A P04439 31555277
    524036 6ope:QB (3.1) BS01 rna ? GO:0003735 ... P80371 32601241
    524037 6ope:QC (3.1) BS01 rna ? GO:0003676 ... P80372 32601241
    524038 6ope:QD (3.1) BS01 rna ? GO:0003723 ... P80373 32601241
    524039 6ope:QD (3.1) BS02 SF4 ? GO:0003723 ... P80373 32601241
    524040 6ope:QE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 32601241
    524041 6ope:QF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 32601241
    524042 6ope:QF (3.1) BS02 MG ? GO:0003735 ... Q5SLP8 32601241
    524043 6ope:QG (3.1) BS01 rna ? GO:0000049 ... P17291 32601241
    524044 6ope:QH (3.1) BS01 rna ? GO:0003735 ... P0DOY9 32601241
    524045 6ope:QI (3.1) BS01 rna ? GO:0000049 ... P80374 32601241
    524046 6ope:QI (3.1) BS02 rna ? GO:0000049 ... P80374 32601241
    524047 6ope:QJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 32601241
    524048 6ope:QK (3.1) BS01 rna ? GO:0003735 ... P80376 32601241
    524049 6ope:QL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 32601241
    524050 6ope:QM (3.1) BS01 rna ? GO:0000049 ... P80377 32601241
    524051 6ope:QM (3.1) BS02 MG ? GO:0000049 ... P80377 32601241
    524052 6ope:QN (3.1) BS01 rna ? GO:0003735 ... P0DOY6 32601241
    524053 6ope:QN (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 32601241
    524054 6ope:QO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 32601241
    524055 6ope:QO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 32601241
    524056 6ope:QP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 32601241
    524057 6ope:QQ (3.1) BS01 rna ? GO:0003735 ... P0DOY7 32601241
    524058 6ope:QR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 32601241
    524059 6ope:QS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 32601241
    524060 6ope:QT (3.1) BS01 rna ? GO:0003723 ... P80380 32601241
    524061 6ope:R0 (3.1) BS01 rna ? GO:0003735 ... P60493 32601241
    524062 6ope:R0 (3.1) BS02 rna ? GO:0003735 ... P60493 32601241
    524063 6ope:R0 (3.1) BS03 rna ? GO:0003735 ... P60493 32601241
    524064 6ope:R1 (3.1) BS01 rna ? GO:0003735 ... P60494 32601241
    524065 6ope:R2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 32601241
    524066 6ope:R3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 32601241
    524067 6ope:R3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 32601241
    524068 6ope:R4 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 32601241
    524069 6ope:R5 (3.1) BS01 rna ? GO:0003735 ... P80339 32601241
    524070 6ope:R6 (3.1) BS01 rna ? GO:0000049 ... P35871 32601241
    524071 6ope:R7 (3.1) BS01 rna ? GO:0003735 ... P80340 32601241
    524072 6ope:R8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 32601241
    524073 6ope:R9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 32601241
    524074 6ope:R9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 32601241
    524075 6ope:RD (3.1) BS01 rna ? GO:0002181 ... P60405 32601241
    524076 6ope:RD (3.1) BS02 rna ? GO:0002181 ... P60405 32601241
    524077 6ope:RE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 32601241
    524078 6ope:RF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 32601241
    524079 6ope:RF (3.1) BS02 MG ? GO:0003735 ... Q5SHN9 32601241
    524080 6ope:RG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 32601241
    524081 6ope:RG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 32601241
    524082 6ope:RG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 32601241
    524083 6ope:RH (3.1) BS01 rna ? GO:0002181 ... P0DOY8 32601241
    524084 6ope:RI (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 32601241
    524085 6ope:RN (3.1) BS01 rna ? GO:0003729 ... P60488 32601241
    524086 6ope:RO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 32601241
    524087 6ope:RO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 32601241
    524088 6ope:RP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 32601241
    524089 6ope:RP (3.1) BS02 MG ? GO:0003735 ... Q5SHQ7 32601241
    524090 6ope:RQ (3.1) BS01 rna ? GO:0000049 ... P60489 32601241
    524091 6ope:RQ (3.1) BS02 rna ? GO:0000049 ... P60489 32601241
    524092 6ope:RR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 32601241
    524093 6ope:RS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 32601241
    524094 6ope:RS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 32601241
    524095 6ope:RT (3.1) BS01 rna ? GO:0003735 ... P60490 32601241
    524096 6ope:RT (3.1) BS02 rna ? GO:0003735 ... P60490 32601241
    524097 6ope:RU (3.1) BS01 rna ? GO:0000027 ... P60491 32601241
    524098 6ope:RV (3.1) BS01 rna ? GO:0003723 ... P60492 32601241
    524099 6ope:RW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 32601241
    524100 6ope:RX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 32601241
    524101 6ope:RY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 32601241
    524102 6ope:RZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 32601241
    524103 6ope:RZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 32601241
    524104 6ope:XB (3.1) BS01 rna ? GO:0003735 ... P80371 32601241
    524105 6ope:XC (3.1) BS01 rna ? GO:0003676 ... P80372 32601241
    524106 6ope:XD (3.1) BS01 rna ? GO:0003723 ... P80373 32601241
    524107 6ope:XD (3.1) BS02 SF4 ? GO:0003723 ... P80373 32601241
    524108 6ope:XE (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 32601241
    524109 6ope:XF (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 32601241
    524110 6ope:XF (3.1) BS02 MG ? GO:0003735 ... Q5SLP8 32601241
    524111 6ope:XG (3.1) BS01 rna ? GO:0000049 ... P17291 32601241
    524112 6ope:XH (3.1) BS01 rna ? GO:0003735 ... P0DOY9 32601241
    524113 6ope:XI (3.1) BS01 rna ? GO:0000049 ... P80374 32601241
    524114 6ope:XI (3.1) BS02 rna ? GO:0000049 ... P80374 32601241
    524115 6ope:XJ (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 32601241
    524116 6ope:XK (3.1) BS01 rna ? GO:0003735 ... P80376 32601241
    524117 6ope:XL (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 32601241
    524118 6ope:XL (3.1) BS02 MG ? GO:0000049 ... Q5SHN3 32601241
    524119 6ope:XM (3.1) BS01 rna ? GO:0000049 ... P80377 32601241
    524120 6ope:XM (3.1) BS02 MG ? GO:0000049 ... P80377 32601241
    524121 6ope:XN (3.1) BS01 rna ? GO:0003735 ... P0DOY6 32601241
    524122 6ope:XN (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 32601241
    524123 6ope:XO (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 32601241
    524124 6ope:XO (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 32601241
    524125 6ope:XP (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 32601241
    524126 6ope:XQ (3.1) BS01 rna ? GO:0003735 ... P0DOY7 32601241
    524127 6ope:XR (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 32601241
    524128 6ope:XS (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 32601241
    524129 6ope:XT (3.1) BS01 rna ? GO:0003723 ... P80380 32601241
    524130 6ope:Y0 (3.1) BS01 rna ? GO:0003735 ... P60493 32601241
    524131 6ope:Y0 (3.1) BS02 rna ? GO:0003735 ... P60493 32601241
    524132 6ope:Y0 (3.1) BS03 rna ? GO:0003735 ... P60493 32601241
    524133 6ope:Y1 (3.1) BS01 rna ? GO:0003735 ... P60494 32601241
    524134 6ope:Y2 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 32601241
    524135 6ope:Y3 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 32601241
    524136 6ope:Y3 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 32601241
    524137 6ope:Y4 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 32601241
    524138 6ope:Y4 (3.1) BS02 rna ? GO:0003735 ... Q5SJE1 32601241
    524139 6ope:Y5 (3.1) BS01 rna ? GO:0003735 ... P80339 32601241
    524140 6ope:Y6 (3.1) BS01 rna ? GO:0000049 ... P35871 32601241
    524141 6ope:Y6 (3.1) BS02 MG ? GO:0000049 ... P35871 32601241
    524142 6ope:Y7 (3.1) BS01 rna ? GO:0003735 ... P80340 32601241
    524143 6ope:Y8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 32601241
    524144 6ope:Y9 (3.1) BS01 rna ? GO:0003735 ... Q5SHR2 32601241
    524145 6ope:Y9 (3.1) BS02 ZN ? GO:0003735 ... Q5SHR2 32601241
    524146 6ope:YD (3.1) BS01 rna ? GO:0002181 ... P60405 32601241
    524147 6ope:YD (3.1) BS02 rna ? GO:0002181 ... P60405 32601241
    524148 6ope:YE (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 32601241
    524149 6ope:YF (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 32601241
    524150 6ope:YG (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 32601241
    524151 6ope:YG (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 32601241
    524152 6ope:YG (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 32601241
    524153 6ope:YH (3.1) BS01 rna ? GO:0002181 ... P0DOY8 32601241
    524154 6ope:YI (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 32601241
    524155 6ope:YI (3.1) BS02 rna ? GO:0003735 ... Q5SLQ1 32601241
    524156 6ope:YN (3.1) BS01 rna ? GO:0003729 ... P60488 32601241
    524157 6ope:YO (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 32601241
    524158 6ope:YO (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 32601241
    524159 6ope:YP (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 32601241
    524160 6ope:YP (3.1) BS02 MG ? GO:0003735 ... Q5SHQ7 32601241
    524161 6ope:YQ (3.1) BS01 rna ? GO:0000049 ... P60489 32601241
    524162 6ope:YQ (3.1) BS02 rna ? GO:0000049 ... P60489 32601241
    524163 6ope:YQ (3.1) BS03 rna ? GO:0000049 ... P60489 32601241
    524164 6ope:YQ (3.1) BS04 MG ? GO:0000049 ... P60489 32601241
    524165 6ope:YQ (3.1) BS05 MG ? GO:0000049 ... P60489 32601241
    524166 6ope:YR (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 32601241
    524167 6ope:YS (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 32601241
    524168 6ope:YS (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 32601241
    524169 6ope:YT (3.1) BS01 rna ? GO:0003735 ... P60490 32601241
    524170 6ope:YT (3.1) BS02 rna ? GO:0003735 ... P60490 32601241
    524171 6ope:YU (3.1) BS01 rna ? GO:0000027 ... P60491 32601241
    524172 6ope:YV (3.1) BS01 rna ? GO:0003723 ... P60492 32601241
    524173 6ope:YW (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 32601241
    524174 6ope:YX (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 32601241
    524175 6ope:YX (3.1) BS02 MG ? GO:0003735 ... Q5SHP0 32601241
    524176 6ope:YY (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 32601241
    524177 6ope:YZ (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 32601241
    524178 6ope:YZ (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 32601241
    524179 6ope:YZ (3.1) BS03 rna ? GO:0003723 ... Q5SHZ1 32601241
    524180 6opg:A (2.9) BS01 ANP 2.7.11.24 GO:0000165 ... P28482 31311868
    524181 6opg:A (2.9) BS02 MG 2.7.11.24 GO:0000165 ... P28482 31311868
    524182 6oph:A (2.4) BS01 6QB 2.7.11.24 GO:0000165 ... P28482 31311868 BindingDB: IC50=3.1nM, Kd=1.6nM
    524183 6opi:A (3.0) BS01 N0V 2.7.11.24 GO:0000165 ... P28482 31311868
    524184 6opj:A (1.50066) BS01 peptide ? GO:0005634 ... O00255 32882610
    524185 6opk:A (2.54) BS01 390 2.7.11.24 GO:0000165 ... P63086 31311868
    524186 6opl:A (1.37) BS01 NAP 1.3.1.-
    1.5.1.30
    2.6.99.-
    GO:0004074 ... P30043 N/A
    524187 6opm:A (3.1) BS01 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524188 6opm:A (3.1) BS02 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524189 6opm:A (3.1) BS03 CA 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524190 6opm:B (3.1) BS01 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524191 6opm:B (3.1) BS02 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524192 6opm:C (3.1) BS01 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524193 6opm:C (3.1) BS02 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524194 6opm:C (3.1) BS03 CA 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524195 6opm:D (3.1) BS01 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524196 6opm:D (3.1) BS02 dna 3.1.-.- GO:0003676 ... A0A0F8IEL4 31913120
    524197 6opn:A (3.5) BS01 MAN ? GO:0019031 ... B3UES2 33238117
    524198 6opn:B (3.5) BS01 N07 ? GO:0005198 ... B3UEZ6 33238117
    524199 6opn:D (3.5) BS01 MAN ? GO:0019031 ... B3UES2 33238117
    524200 6opn:E (3.5) BS01 N07 ? GO:0005198 ... B3UEZ6 33238117

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).