SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    524601 6orf:B (1.7) BS01 FUC ? GO:0004560 ... A0A0H2US78 31266803
    524602 6orf:B (1.7) BS02 GAL ? GO:0004560 ... A0A0H2US78 31266803
    524603 6org:A (1.72) BS01 CA ? GO:0004560 ... A0A0H2US78 31266803
    524604 6org:B (1.72) BS01 CA ? GO:0004560 ... A0A0H2US78 31266803
    524605 6orh:A (1.62) BS01 GAL ? GO:0004560 ... A0A0H2US78 31266803
    524606 6orh:A (1.62) BS02 FUC ? GO:0004560 ... A0A0H2US78 31266803
    524607 6orh:A (1.62) BS03 FUC ? GO:0004560 ... A0A0H2US78 31266803
    524608 6orh:B (1.62) BS01 GAL ? GO:0004560 ... A0A0H2US78 31266803
    524609 6orh:B (1.62) BS02 FUC ? GO:0004560 ... A0A0H2US78 31266803
    524610 6orh:B (1.62) BS03 FUC ? GO:0004560 ... A0A0H2US78 31266803
    524611 6ori:A (1.4) BS01 CA ? N/A Q9Z4N7 N/A
    524612 6orl:A (3.5) BS01 rna ? GO:0003747 ... P0A7I0 31189921
    524613 6orl:A (3.5) BS02 rna ? GO:0003747 ... P0A7I0 31189921
    524614 6orl:B (3.5) BS01 rna ? GO:0000027 ... P60422 31189921
    524615 6orl:C (3.5) BS01 rna ? GO:0000027 ... P60438 31189921
    524616 6orl:D (3.5) BS01 rna ? GO:0001070 ... P60723 31189921
    524617 6orl:E (3.5) BS01 rna ? GO:0000027 ... P62399 31189921
    524618 6orl:E (3.5) BS02 rna ? GO:0000027 ... P62399 31189921
    524619 6orl:E (3.5) BS03 rna ? GO:0000027 ... P62399 31189921
    524620 6orl:F (3.5) BS01 rna ? GO:0000027 ... P0AG55 31189921
    524621 6orl:G (3.5) BS01 rna ? GO:0002181 ... P0A7R1 31189921
    524622 6orl:J (3.5) BS01 rna ? GO:0002181 ... P0AA10 31189921
    524623 6orl:K (3.5) BS01 rna ? GO:0002181 ... P0ADY3 31189921
    524624 6orl:K (3.5) BS02 rna ? GO:0002181 ... P0ADY3 31189921
    524625 6orl:L (3.5) BS01 rna ? GO:0002181 ... P02413 31189921
    524626 6orl:M (3.5) BS01 rna ? GO:0000027 ... P0ADY7 31189921
    524627 6orl:N (3.5) BS01 rna ? GO:0000027 ... P0AG44 31189921
    524628 6orl:O (3.5) BS01 rna ? GO:0002181 ... P0C018 31189921
    524629 6orl:O (3.5) BS02 rna ? GO:0002181 ... P0C018 31189921
    524630 6orl:P (3.5) BS01 rna ? GO:0000027 ... P0A7K6 31189921
    524631 6orl:P (3.5) BS02 rna ? GO:0000027 ... P0A7K6 31189921
    524632 6orl:Q (3.5) BS01 rna ? GO:0000027 ... P0A7L3 31189921
    524633 6orl:R (3.5) BS01 rna ? GO:0002181 ... P0AG48 31189921
    524634 6orl:S (3.5) BS01 rna ? GO:0002181 ... P61175 31189921
    524635 6orl:T (3.5) BS01 rna ? GO:0000027 ... P0ADZ0 31189921
    524636 6orl:U (3.5) BS01 rna ? GO:0000027 ... P60624 31189921
    524637 6orl:V (3.5) BS01 rna ? GO:0000027 ... P68919 31189921
    524638 6orl:W (3.5) BS01 rna ? GO:0003735 ... P0A7L8 31189921
    524639 6orl:X (3.5) BS01 rna ? GO:0000027 ... P0A7M2 31189921
    524640 6orl:Y (3.5) BS01 rna ? GO:0000027 ... P0A7M6 31189921
    524641 6orl:Z (3.5) BS01 rna ? GO:0000027 ... P0AG51 31189921
    524642 6orl:Z (3.5) BS02 rna ? GO:0000027 ... P0AG51 31189921
    524643 6orl:b (3.5) BS01 rna ? GO:0000027 ... P0A7N4 31189921
    524644 6orl:c (3.5) BS01 rna ? GO:0000027 ... P0A7N9 31189921
    524645 6orl:d (3.5) BS01 rna ? GO:0002181 ... P0A7P5 31189921
    524646 6orl:e (3.5) BS01 rna ? GO:0002181 ... P0A7Q1 31189921
    524647 6orl:f (3.5) BS01 rna ? GO:0003735 ... A0A0E2L017 31189921
    524648 6orl:f (3.5) BS02 ZN ? GO:0003735 ... A0A0E2L017 31189921
    524649 6orl:g (3.5) BS01 rna ? GO:0000028 ... P0A7V0 31189921
    524650 6orl:h (3.5) BS01 rna ? GO:0003676 ... P0A7V3 31189921
    524651 6orl:i (3.5) BS01 rna ? GO:0000028 ... P0A7V8 31189921
    524652 6orl:i (3.5) BS02 MG ? GO:0000028 ... P0A7V8 31189921
    524653 6orl:j (3.5) BS01 rna ? GO:0000028 ... P0A7W1 31189921
    524654 6orl:k (3.5) BS01 rna ? GO:0003735 ... P02358 31189921
    524655 6orl:l (3.5) BS01 rna ? GO:0003723 ... P02359 31189921
    524656 6orl:m (3.5) BS01 rna ? GO:0000028 ... P0A7W7 31189921
    524657 6orl:n (3.5) BS01 rna ? GO:0000049 ... P0A7X3 31189921
    524658 6orl:n (3.5) BS02 rna ? GO:0000049 ... P0A7X3 31189921
    524659 6orl:o (3.5) BS01 rna ? GO:0000049 ... P0A7R5 31189921
    524660 6orl:p (3.5) BS01 rna ? GO:0002181 ... P0A7R9 31189921
    524661 6orl:q (3.5) BS01 rna ? GO:0000049 ... P0A7S3 31189921
    524662 6orl:r (3.5) BS01 rna ? GO:0000049 ... P0A7S9 31189921
    524663 6orl:r (3.5) BS02 rna ? GO:0000049 ... P0A7S9 31189921
    524664 6orl:s (3.5) BS01 rna ? GO:0000028 ... P0AG59 31189921
    524665 6orl:t (3.5) BS01 rna ? GO:0000028 ... P0ADZ4 31189921
    524666 6orl:u (3.5) BS01 rna ? GO:0000028 ... P0A7T3 31189921
    524667 6orl:v (3.5) BS01 rna ? GO:0000028 ... P0AG63 31189921
    524668 6orl:w (3.5) BS01 rna ? GO:0003735 ... P0A7T7 31189921
    524669 6orl:x (3.5) BS01 rna ? GO:0000028 ... P0A7U3 31189921
    524670 6orl:y (3.5) BS01 rna ? GO:0000028 ... P0A7U7 31189921
    524671 6orl:z (3.5) BS01 rna ? GO:0000028 ... P68679 31189921
    524672 6orn:B (4.05) BS01 MAN N/A N/A N/A 31142836
    524673 6orn:I (4.05) BS01 MAN N/A N/A N/A 31142836
    524674 6orn:P (4.05) BS01 MAN N/A N/A N/A 31142836
    524675 6orr:A (2.25) BS01 N37 2.1.1.1 GO:0005737 ... P40261 31589440 MOAD: Ki=500pM
    BindingDB: Ki=500nM
    524676 6orr:B (2.25) BS01 N37 2.1.1.1 GO:0005737 ... P40261 31589440 MOAD: Ki=500pM
    BindingDB: Ki=500nM
    524677 6orr:C (2.25) BS01 N37 2.1.1.1 GO:0005737 ... P40261 31589440 MOAD: Ki=500pM
    BindingDB: Ki=500nM
    524678 6orr:D (2.25) BS01 N37 2.1.1.1 GO:0005737 ... P40261 31589440 MOAD: Ki=500pM
    BindingDB: Ki=500nM
    524679 6oru:A (2.392) BS01 N3G 6.3.4.15 GO:0003677 ... A0A3A5LBF0 N/A
    524680 6orv:RP (3.0) BS01 N2V ? GO:0004888 ... P43220 31915381 BindingDB: EC50=13nM
    524681 6os0:A (2.9) BS01 peptide ? GO:0004930 ... P0ABE7
    P30556
    32079768
    524682 6os1:A (2.794) BS01 peptide ? GO:0004930 ... P0ABE7
    P30556
    32079768
    524683 6os1:A (2.794) BS02 CLR ? GO:0004930 ... P0ABE7
    P30556
    32079768
    524684 6os2:A (2.7) BS01 peptide ? GO:0004930 ... P0ABE7
    P30556
    32079768
    524685 6os2:A (2.7) BS02 CLR ? GO:0004930 ... P0ABE7
    P30556
    32079768
    524686 6os4:A (2.05) BS01 CA ? GO:0000086 ... P0DP23 32234958
    524687 6os4:A (2.05) BS02 CA ? GO:0000086 ... P0DP23 32234958
    524688 6os4:A (2.05) BS03 CA ? GO:0000086 ... P0DP23 32234958
    524689 6os4:A (2.05) BS04 CA ? GO:0000086 ... P0DP23 32234958
    524690 6os4:A (2.05) BS05 5U0 ? GO:0000086 ... P0DP23 32234958
    524691 6os5:A (1.66) BS01 TRP ? GO:0009820 ... A8M6W6 31251043 MOAD: Kd=4.4uM
    524692 6os5:B (1.66) BS01 TRP ? GO:0009820 ... A8M6W6 31251043 MOAD: Kd=4.4uM
    524693 6os5:B (1.66) BS02 DPO ? GO:0009820 ... A8M6W6 31251043
    524694 6os5:C (1.66) BS01 DPO ? GO:0009820 ... A8M6W6 31251043
    524695 6os6:A (1.33) BS01 DST ? GO:0009820 ... A8M6W6 31251043 MOAD: Kd=1uM
    524696 6os6:A (1.33) BS02 TRP ? GO:0009820 ... A8M6W6 31251043 MOAD: Kd=1.1uM
    524697 6os6:A (1.33) BS03 ZN ? GO:0009820 ... A8M6W6 31251043
    524698 6os9:R (3.0) BS01 peptide ? GO:0001659 ... P30989 31243364
    524699 6osa:R (3.0) BS01 peptide ? GO:0001659 ... P30989 31243364
    524700 6osi:QB (4.14) BS01 rna ? GO:0003735 ... P80371 33016876
    524701 6osi:QC (4.14) BS01 rna ? GO:0003676 ... P80372 33016876
    524702 6osi:QD (4.14) BS01 rna ? GO:0003723 ... P80373 33016876
    524703 6osi:QD (4.14) BS02 SF4 ? GO:0003723 ... P80373 33016876
    524704 6osi:QE (4.14) BS01 rna ? GO:0003723 ... Q5SHQ5 33016876
    524705 6osi:QF (4.14) BS01 rna ? GO:0003735 ... Q5SLP8 33016876
    524706 6osi:QF (4.14) BS02 MG ? GO:0003735 ... Q5SLP8 33016876
    524707 6osi:QG (4.14) BS01 rna ? GO:0000049 ... P17291 33016876
    524708 6osi:QH (4.14) BS01 rna ? GO:0003735 ... P0DOY9 33016876
    524709 6osi:QI (4.14) BS01 rna ? GO:0000049 ... P80374 33016876
    524710 6osi:QJ (4.14) BS01 rna ? GO:0000049 ... Q5SHN7 33016876
    524711 6osi:QK (4.14) BS01 rna ? GO:0003735 ... P80376 33016876
    524712 6osi:QK (4.14) BS02 rna ? GO:0003735 ... P80376 33016876
    524713 6osi:QK (4.14) BS03 MG ? GO:0003735 ... P80376 33016876
    524714 6osi:QL (4.14) BS01 rna ? GO:0000049 ... Q5SHN3 33016876
    524715 6osi:QM (4.14) BS01 rna ? GO:0000049 ... P80377 33016876
    524716 6osi:QN (4.14) BS01 rna ? GO:0003735 ... P0DOY6 33016876
    524717 6osi:QN (4.14) BS02 ZN ? GO:0003735 ... P0DOY6 33016876
    524718 6osi:QO (4.14) BS01 rna ? GO:0003735 ... Q5SJ76 33016876
    524719 6osi:QP (4.14) BS01 rna ? GO:0003735 ... Q5SJH3 33016876
    524720 6osi:QQ (4.14) BS01 rna ? GO:0003735 ... P0DOY7 33016876
    524721 6osi:QR (4.14) BS01 rna ? GO:0003735 ... Q5SLQ0 33016876
    524722 6osi:QS (4.14) BS01 rna ? GO:0000028 ... Q5SHP2 33016876
    524723 6osi:QT (4.14) BS01 rna ? GO:0003723 ... P80380 33016876
    524724 6osi:R0 (4.14) BS01 rna ? GO:0003735 ... P60493 33016876
    524725 6osi:R1 (4.14) BS01 rna ? GO:0003735 ... P60494 33016876
    524726 6osi:R1 (4.14) BS02 rna ? GO:0003735 ... P60494 33016876
    524727 6osi:R2 (4.14) BS01 rna ? GO:0003735 ... Q5SHP6 33016876
    524728 6osi:R3 (4.14) BS01 rna ? GO:0003735 ... Q5SHQ6 33016876
    524729 6osi:R4 (4.14) BS01 rna ? GO:0003735 ... Q5SJE1 33016876
    524730 6osi:R5 (4.14) BS01 rna ? GO:0003735 ... P80339 33016876
    524731 6osi:R5 (4.14) BS02 ZN ? GO:0003735 ... P80339 33016876
    524732 6osi:R6 (4.14) BS01 rna ? GO:0000049 ... P35871 33016876
    524733 6osi:R6 (4.14) BS02 ZN ? GO:0000049 ... P35871 33016876
    524734 6osi:R7 (4.14) BS01 rna ? GO:0003735 ... P80340 33016876
    524735 6osi:R8 (4.14) BS01 rna ? GO:0003735 ... Q5SKU1 33016876
    524736 6osi:R9 (4.14) BS01 rna ? GO:0003735 ... Q5SHR2 33016876
    524737 6osi:R9 (4.14) BS02 ZN ? GO:0003735 ... Q5SHR2 33016876
    524738 6osi:RD (4.14) BS01 rna ? GO:0002181 ... P60405 33016876
    524739 6osi:RE (4.14) BS01 rna ? GO:0003735 ... Q5SHN8 33016876
    524740 6osi:RF (4.14) BS01 rna ? GO:0003735 ... Q5SHN9 33016876
    524741 6osi:RF (4.14) BS02 MG ? GO:0003735 ... Q5SHN9 33016876
    524742 6osi:RF (4.14) BS03 MG ? GO:0003735 ... Q5SHN9 33016876
    524743 6osi:RG (4.14) BS01 rna ? GO:0000049 ... Q5SHQ0 33016876
    524744 6osi:RG (4.14) BS02 rna ? GO:0000049 ... Q5SHQ0 33016876
    524745 6osi:RH (4.14) BS01 rna ? GO:0002181 ... P0DOY8 33016876
    524746 6osi:RI (4.14) BS01 rna ? GO:0003735 ... Q5SLQ1 33016876
    524747 6osi:RN (4.14) BS01 rna ? GO:0003729 ... P60488 33016876
    524748 6osi:RO (4.14) BS01 rna ? GO:0003735 ... Q5SHP8 33016876
    524749 6osi:RO (4.14) BS02 rna ? GO:0003735 ... Q5SHP8 33016876
    524750 6osi:RP (4.14) BS01 rna ? GO:0003735 ... Q5SHQ7 33016876
    524751 6osi:RQ (4.14) BS01 rna ? GO:0000049 ... P60489 33016876
    524752 6osi:RQ (4.14) BS02 rna ? GO:0000049 ... P60489 33016876
    524753 6osi:RR (4.14) BS01 rna ? GO:0003735 ... Q9Z9H5 33016876
    524754 6osi:RS (4.14) BS01 rna ? GO:0003735 ... Q5SHQ4 33016876
    524755 6osi:RS (4.14) BS02 rna ? GO:0003735 ... Q5SHQ4 33016876
    524756 6osi:RT (4.14) BS01 rna ? GO:0003735 ... P60490 33016876
    524757 6osi:RT (4.14) BS02 rna ? GO:0003735 ... P60490 33016876
    524758 6osi:RU (4.14) BS01 rna ? GO:0000027 ... P60491 33016876
    524759 6osi:RV (4.14) BS01 rna ? GO:0003723 ... P60492 33016876
    524760 6osi:RW (4.14) BS01 rna ? GO:0003735 ... Q5SHP3 33016876
    524761 6osi:RX (4.14) BS01 rna ? GO:0003735 ... Q5SHP0 33016876
    524762 6osi:RY (4.14) BS01 rna ? GO:0003723 ... Q5SHP9 33016876
    524763 6osi:RY (4.14) BS02 ZN ? GO:0003723 ... Q5SHP9 33016876
    524764 6osi:RZ (4.14) BS01 rna ? GO:0003723 ... Q5SHZ1 33016876
    524765 6osi:RZ (4.14) BS02 rna ? GO:0003723 ... Q5SHZ1 33016876
    524766 6osi:XB (4.14) BS01 rna ? GO:0003735 ... P80371 33016876
    524767 6osi:XC (4.14) BS01 rna ? GO:0003676 ... P80372 33016876
    524768 6osi:XD (4.14) BS01 rna ? GO:0003723 ... P80373 33016876
    524769 6osi:XD (4.14) BS02 SF4 ? GO:0003723 ... P80373 33016876
    524770 6osi:XE (4.14) BS01 rna ? GO:0003723 ... Q5SHQ5 33016876
    524771 6osi:XF (4.14) BS01 rna ? GO:0003735 ... Q5SLP8 33016876
    524772 6osi:XG (4.14) BS01 rna ? GO:0000049 ... P17291 33016876
    524773 6osi:XH (4.14) BS01 rna ? GO:0003735 ... P0DOY9 33016876
    524774 6osi:XI (4.14) BS01 rna ? GO:0000049 ... P80374 33016876
    524775 6osi:XJ (4.14) BS01 rna ? GO:0000049 ... Q5SHN7 33016876
    524776 6osi:XK (4.14) BS01 rna ? GO:0003735 ... P80376 33016876
    524777 6osi:XL (4.14) BS01 rna ? GO:0000049 ... Q5SHN3 33016876
    524778 6osi:XM (4.14) BS01 rna ? GO:0000049 ... P80377 33016876
    524779 6osi:XN (4.14) BS01 rna ? GO:0003735 ... P0DOY6 33016876
    524780 6osi:XN (4.14) BS02 ZN ? GO:0003735 ... P0DOY6 33016876
    524781 6osi:XO (4.14) BS01 rna ? GO:0003735 ... Q5SJ76 33016876
    524782 6osi:XO (4.14) BS02 rna ? GO:0003735 ... Q5SJ76 33016876
    524783 6osi:XP (4.14) BS01 rna ? GO:0003735 ... Q5SJH3 33016876
    524784 6osi:XQ (4.14) BS01 rna ? GO:0003735 ... P0DOY7 33016876
    524785 6osi:XR (4.14) BS01 rna ? GO:0003735 ... Q5SLQ0 33016876
    524786 6osi:XS (4.14) BS01 rna ? GO:0000028 ... Q5SHP2 33016876
    524787 6osi:XT (4.14) BS01 rna ? GO:0003723 ... P80380 33016876
    524788 6osi:Y0 (4.14) BS01 rna ? GO:0003735 ... P60493 33016876
    524789 6osi:Y0 (4.14) BS02 rna ? GO:0003735 ... P60493 33016876
    524790 6osi:Y1 (4.14) BS01 rna ? GO:0003735 ... P60494 33016876
    524791 6osi:Y2 (4.14) BS01 rna ? GO:0003735 ... Q5SHP6 33016876
    524792 6osi:Y2 (4.14) BS02 MG ? GO:0003735 ... Q5SHP6 33016876
    524793 6osi:Y3 (4.14) BS01 rna ? GO:0003735 ... Q5SHQ6 33016876
    524794 6osi:Y3 (4.14) BS02 rna ? GO:0003735 ... Q5SHQ6 33016876
    524795 6osi:Y5 (4.14) BS01 rna ? GO:0003735 ... P80339 33016876
    524796 6osi:Y5 (4.14) BS02 ZN ? GO:0003735 ... P80339 33016876
    524797 6osi:Y6 (4.14) BS01 rna ? GO:0000049 ... P35871 33016876
    524798 6osi:Y6 (4.14) BS02 ZN ? GO:0000049 ... P35871 33016876
    524799 6osi:Y7 (4.14) BS01 rna ? GO:0003735 ... P80340 33016876
    524800 6osi:Y8 (4.14) BS01 rna ? GO:0003735 ... Q5SKU1 33016876

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).