SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    524801 6osi:Y9 (4.14) BS01 rna ? GO:0003735 ... Q5SHR2 33016876
    524802 6osi:Y9 (4.14) BS02 ZN ? GO:0003735 ... Q5SHR2 33016876
    524803 6osi:YD (4.14) BS01 rna ? GO:0002181 ... P60405 33016876
    524804 6osi:YD (4.14) BS02 MG ? GO:0002181 ... P60405 33016876
    524805 6osi:YD (4.14) BS03 MG ? GO:0002181 ... P60405 33016876
    524806 6osi:YD (4.14) BS04 MG ? GO:0002181 ... P60405 33016876
    524807 6osi:YE (4.14) BS01 rna ? GO:0003735 ... Q5SHN8 33016876
    524808 6osi:YF (4.14) BS01 rna ? GO:0003735 ... Q5SHN9 33016876
    524809 6osi:YG (4.14) BS01 rna ? GO:0000049 ... Q5SHQ0 33016876
    524810 6osi:YG (4.14) BS02 rna ? GO:0000049 ... Q5SHQ0 33016876
    524811 6osi:YH (4.14) BS01 rna ? GO:0002181 ... P0DOY8 33016876
    524812 6osi:YI (4.14) BS01 rna ? GO:0003735 ... Q5SLQ1 33016876
    524813 6osi:YI (4.14) BS02 rna ? GO:0003735 ... Q5SLQ1 33016876
    524814 6osi:YN (4.14) BS01 rna ? GO:0003729 ... P60488 33016876
    524815 6osi:YO (4.14) BS01 rna ? GO:0003735 ... Q5SHP8 33016876
    524816 6osi:YO (4.14) BS02 rna ? GO:0003735 ... Q5SHP8 33016876
    524817 6osi:YP (4.14) BS01 rna ? GO:0003735 ... Q5SHQ7 33016876
    524818 6osi:YP (4.14) BS02 MG ? GO:0003735 ... Q5SHQ7 33016876
    524819 6osi:YQ (4.14) BS01 rna ? GO:0000049 ... P60489 33016876
    524820 6osi:YQ (4.14) BS02 rna ? GO:0000049 ... P60489 33016876
    524821 6osi:YQ (4.14) BS03 MG ? GO:0000049 ... P60489 33016876
    524822 6osi:YR (4.14) BS01 rna ? GO:0003735 ... Q9Z9H5 33016876
    524823 6osi:YS (4.14) BS01 rna ? GO:0003735 ... Q5SHQ4 33016876
    524824 6osi:YS (4.14) BS02 rna ? GO:0003735 ... Q5SHQ4 33016876
    524825 6osi:YT (4.14) BS01 rna ? GO:0003735 ... P60490 33016876
    524826 6osi:YT (4.14) BS02 rna ? GO:0003735 ... P60490 33016876
    524827 6osi:YU (4.14) BS01 rna ? GO:0000027 ... P60491 33016876
    524828 6osi:YV (4.14) BS01 rna ? GO:0003723 ... P60492 33016876
    524829 6osi:YW (4.14) BS01 rna ? GO:0003735 ... Q5SHP3 33016876
    524830 6osi:YX (4.14) BS01 rna ? GO:0003735 ... Q5SHP0 33016876
    524831 6osi:YY (4.14) BS01 rna ? GO:0003723 ... Q5SHP9 33016876
    524832 6osi:YY (4.14) BS02 ZN ? GO:0003723 ... Q5SHP9 33016876
    524833 6osi:YZ (4.14) BS01 rna ? GO:0003723 ... Q5SHZ1 33016876
    524834 6osi:YZ (4.14) BS02 rna ? GO:0003723 ... Q5SHZ1 33016876
    524835 6osk:A (3.6) BS01 rna ? GO:0003747 ... P0A7I0 31189921
    524836 6osk:A (3.6) BS02 rna ? GO:0003747 ... P0A7I0 31189921
    524837 6osk:A (3.6) BS03 rna ? GO:0003747 ... P0A7I0 31189921
    524838 6osk:A (3.6) BS04 rna ? GO:0003747 ... P0A7I0 31189921
    524839 6osk:B (3.6) BS01 rna ? GO:0000027 ... P60422 31189921
    524840 6osk:C (3.6) BS01 rna ? GO:0000027 ... P60438 31189921
    524841 6osk:D (3.6) BS01 rna ? GO:0001070 ... P60723 31189921
    524842 6osk:E (3.6) BS01 rna ? GO:0000027 ... P62399 31189921
    524843 6osk:E (3.6) BS02 rna ? GO:0000027 ... P62399 31189921
    524844 6osk:E (3.6) BS03 rna ? GO:0000027 ... P62399 31189921
    524845 6osk:F (3.6) BS01 rna ? GO:0000027 ... P0AG55 31189921
    524846 6osk:G (3.6) BS01 rna ? GO:0002181 ... P0A7R1 31189921
    524847 6osk:J (3.6) BS01 rna ? GO:0002181 ... P0AA10 31189921
    524848 6osk:K (3.6) BS01 rna ? GO:0002181 ... P0ADY3 31189921
    524849 6osk:K (3.6) BS02 rna ? GO:0002181 ... P0ADY3 31189921
    524850 6osk:L (3.6) BS01 rna ? GO:0002181 ... P02413 31189921
    524851 6osk:M (3.6) BS01 rna ? GO:0000027 ... P0ADY7 31189921
    524852 6osk:M (3.6) BS02 rna ? GO:0000027 ... P0ADY7 31189921
    524853 6osk:N (3.6) BS01 rna ? GO:0000027 ... P0AG44 31189921
    524854 6osk:O (3.6) BS01 rna ? GO:0002181 ... P0C018 31189921
    524855 6osk:O (3.6) BS02 rna ? GO:0002181 ... P0C018 31189921
    524856 6osk:P (3.6) BS01 rna ? GO:0000027 ... P0A7K6 31189921
    524857 6osk:P (3.6) BS02 rna ? GO:0000027 ... P0A7K6 31189921
    524858 6osk:Q (3.6) BS01 rna ? GO:0000027 ... P0A7L3 31189921
    524859 6osk:R (3.6) BS01 rna ? GO:0002181 ... P0AG48 31189921
    524860 6osk:S (3.6) BS01 rna ? GO:0002181 ... P61175 31189921
    524861 6osk:T (3.6) BS01 rna ? GO:0000027 ... P0ADZ0 31189921
    524862 6osk:U (3.6) BS01 rna ? GO:0000027 ... P60624 31189921
    524863 6osk:U (3.6) BS02 MG ? GO:0000027 ... P60624 31189921
    524864 6osk:V (3.6) BS01 rna ? GO:0000027 ... P68919 31189921
    524865 6osk:V (3.6) BS02 rna ? GO:0000027 ... P68919 31189921
    524866 6osk:W (3.6) BS01 rna ? GO:0003735 ... P0A7L8 31189921
    524867 6osk:X (3.6) BS01 rna ? GO:0000027 ... P0A7M2 31189921
    524868 6osk:Y (3.6) BS01 rna ? GO:0000027 ... P0A7M6 31189921
    524869 6osk:Z (3.6) BS01 rna ? GO:0000027 ... P0AG51 31189921
    524870 6osk:a (3.6) BS01 rna ? GO:0002181 ... P0A7M9 31189921
    524871 6osk:a (3.6) BS02 rna ? GO:0002181 ... P0A7M9 31189921
    524872 6osk:b (3.6) BS01 rna ? GO:0000027 ... P0A7N4 31189921
    524873 6osk:c (3.6) BS01 rna ? GO:0000027 ... P0A7N9 31189921
    524874 6osk:d (3.6) BS01 rna ? GO:0002181 ... P0A7P5 31189921
    524875 6osk:e (3.6) BS01 rna ? GO:0002181 ... P0A7Q1 31189921
    524876 6osk:f (3.6) BS01 rna ? GO:0002181 ... P0A7Q6 31189921
    524877 6osk:f (3.6) BS02 ZN ? GO:0002181 ... P0A7Q6 31189921
    524878 6osk:g (3.6) BS01 rna ? GO:0000028 ... P0A7V0 31189921
    524879 6osk:h (3.6) BS01 rna ? GO:0003676 ... P0A7V3 31189921
    524880 6osk:i (3.6) BS01 rna ? GO:0000028 ... P0A7V8 31189921
    524881 6osk:j (3.6) BS01 rna ? GO:0000028 ... P0A7W1 31189921
    524882 6osk:k (3.6) BS01 rna ? GO:0003735 ... P02358 31189921
    524883 6osk:l (3.6) BS01 rna ? GO:0003723 ... P02359 31189921
    524884 6osk:m (3.6) BS01 rna ? GO:0000028 ... P0A7W7 31189921
    524885 6osk:n (3.6) BS01 rna ? GO:0000049 ... P0A7X3 31189921
    524886 6osk:n (3.6) BS02 rna ? GO:0000049 ... P0A7X3 31189921
    524887 6osk:o (3.6) BS01 rna ? GO:0000049 ... P0A7R5 31189921
    524888 6osk:p (3.6) BS01 rna ? GO:0002181 ... P0A7R9 31189921
    524889 6osk:q (3.6) BS01 rna ? GO:0000049 ... P0A7S3 31189921
    524890 6osk:r (3.6) BS01 rna ? GO:0000049 ... P0A7S9 31189921
    524891 6osk:r (3.6) BS02 rna ? GO:0000049 ... P0A7S9 31189921
    524892 6osk:s (3.6) BS01 rna ? GO:0000028 ... P0AG59 31189921
    524893 6osk:t (3.6) BS01 rna ? GO:0000028 ... P0ADZ4 31189921
    524894 6osk:t (3.6) BS02 rna ? GO:0000028 ... P0ADZ4 31189921
    524895 6osk:u (3.6) BS01 rna ? GO:0000028 ... P0A7T3 31189921
    524896 6osk:v (3.6) BS01 rna ? GO:0000028 ... P0AG63 31189921
    524897 6osk:w (3.6) BS01 rna ? GO:0003735 ... P0A7T7 31189921
    524898 6osk:x (3.6) BS01 rna ? GO:0000028 ... P0A7U3 31189921
    524899 6osk:y (3.6) BS01 rna ? GO:0000028 ... P0A7U7 31189921
    524900 6osk:z (3.6) BS01 rna ? GO:0000028 ... P68679 31189921
    524901 6osp:A (2.21) BS01 N51 2.7.1.149 GO:0001750 ... P48426 32130941 MOAD: ic50=190nM
    BindingDB: IC50=950nM
    524902 6osp:B (2.21) BS01 N51 2.7.1.149 GO:0001750 ... P48426 32130941 MOAD: ic50=190nM
    BindingDB: IC50=950nM
    524903 6osq:A (3.5) BS01 rna ? GO:0003747 ... P0A7I0 31189921
    524904 6osq:A (3.5) BS02 rna ? GO:0003747 ... P0A7I0 31189921
    524905 6osq:A (3.5) BS03 rna ? GO:0003747 ... P0A7I0 31189921
    524906 6osq:A (3.5) BS04 rna ? GO:0003747 ... P0A7I0 31189921
    524907 6osq:B (3.5) BS01 rna ? GO:0000027 ... P60422 31189921
    524908 6osq:B (3.5) BS02 rna ? GO:0000027 ... P60422 31189921
    524909 6osq:C (3.5) BS01 rna ? GO:0000027 ... P60438 31189921
    524910 6osq:D (3.5) BS01 rna ? GO:0001070 ... P60723 31189921
    524911 6osq:E (3.5) BS01 rna ? GO:0000027 ... P62399 31189921
    524912 6osq:E (3.5) BS02 rna ? GO:0000027 ... P62399 31189921
    524913 6osq:E (3.5) BS03 rna ? GO:0000027 ... P62399 31189921
    524914 6osq:F (3.5) BS01 rna ? GO:0000027 ... P0AG55 31189921
    524915 6osq:G (3.5) BS01 rna ? GO:0002181 ... P0A7R1 31189921
    524916 6osq:J (3.5) BS01 rna ? GO:0002181 ... P0AA10 31189921
    524917 6osq:K (3.5) BS01 rna ? GO:0002181 ... P0ADY3 31189921
    524918 6osq:K (3.5) BS02 rna ? GO:0002181 ... P0ADY3 31189921
    524919 6osq:L (3.5) BS01 rna ? GO:0002181 ... P02413 31189921
    524920 6osq:M (3.5) BS01 rna ? GO:0000027 ... P0ADY7 31189921
    524921 6osq:M (3.5) BS02 rna ? GO:0000027 ... P0ADY7 31189921
    524922 6osq:N (3.5) BS01 rna ? GO:0000027 ... P0AG44 31189921
    524923 6osq:O (3.5) BS01 rna ? GO:0002181 ... P0C018 31189921
    524924 6osq:O (3.5) BS02 rna ? GO:0002181 ... P0C018 31189921
    524925 6osq:P (3.5) BS01 rna ? GO:0000027 ... P0A7K6 31189921
    524926 6osq:P (3.5) BS02 rna ? GO:0000027 ... P0A7K6 31189921
    524927 6osq:Q (3.5) BS01 rna ? GO:0000027 ... P0A7L3 31189921
    524928 6osq:R (3.5) BS01 rna ? GO:0002181 ... P0AG48 31189921
    524929 6osq:S (3.5) BS01 rna ? GO:0002181 ... P61175 31189921
    524930 6osq:T (3.5) BS01 rna ? GO:0000027 ... P0ADZ0 31189921
    524931 6osq:U (3.5) BS01 rna ? GO:0000027 ... P60624 31189921
    524932 6osq:V (3.5) BS01 rna ? GO:0000027 ... P68919 31189921
    524933 6osq:V (3.5) BS02 rna ? GO:0000027 ... P68919 31189921
    524934 6osq:W (3.5) BS01 rna ? GO:0003735 ... P0A7L8 31189921
    524935 6osq:W (3.5) BS02 rna ? GO:0003735 ... P0A7L8 31189921
    524936 6osq:X (3.5) BS01 rna ? GO:0000027 ... P0A7M2 31189921
    524937 6osq:Y (3.5) BS01 rna ? GO:0000027 ... P0A7M6 31189921
    524938 6osq:Z (3.5) BS01 rna ? GO:0000027 ... P0AG51 31189921
    524939 6osq:Z (3.5) BS02 rna ? GO:0000027 ... P0AG51 31189921
    524940 6osq:a (3.5) BS01 rna ? GO:0002181 ... P0A7M9 31189921
    524941 6osq:a (3.5) BS02 rna ? GO:0002181 ... P0A7M9 31189921
    524942 6osq:a (3.5) BS03 ZN ? GO:0002181 ... P0A7M9 31189921
    524943 6osq:b (3.5) BS01 rna ? GO:0000027 ... P0A7N4 31189921
    524944 6osq:c (3.5) BS01 rna ? GO:0000027 ... P0A7N9 31189921
    524945 6osq:d (3.5) BS01 rna ? GO:0002181 ... P0A7P5 31189921
    524946 6osq:e (3.5) BS01 rna ? GO:0002181 ... P0A7Q1 31189921
    524947 6osq:f (3.5) BS01 rna ? GO:0002181 ... P0A7Q6 31189921
    524948 6osq:g (3.5) BS01 rna ? GO:0000028 ... P0A7V0 31189921
    524949 6osq:h (3.5) BS01 rna ? GO:0003676 ... P0A7V3 31189921
    524950 6osq:i (3.5) BS01 rna ? GO:0000028 ... P0A7V8 31189921
    524951 6osq:i (3.5) BS02 MG ? GO:0000028 ... P0A7V8 31189921
    524952 6osq:j (3.5) BS01 rna ? GO:0000028 ... P0A7W1 31189921
    524953 6osq:k (3.5) BS01 rna ? GO:0003735 ... P02358 31189921
    524954 6osq:l (3.5) BS01 rna ? GO:0003723 ... P02359 31189921
    524955 6osq:m (3.5) BS01 rna ? GO:0000028 ... P0A7W7 31189921
    524956 6osq:n (3.5) BS01 rna ? GO:0000049 ... P0A7X3 31189921
    524957 6osq:o (3.5) BS01 rna ? GO:0000049 ... P0A7R5 31189921
    524958 6osq:p (3.5) BS01 rna ? GO:0002181 ... P0A7R9 31189921
    524959 6osq:q (3.5) BS01 rna ? GO:0000049 ... P0A7S3 31189921
    524960 6osq:r (3.5) BS01 rna ? GO:0000049 ... P0A7S9 31189921
    524961 6osq:r (3.5) BS02 rna ? GO:0000049 ... P0A7S9 31189921
    524962 6osq:s (3.5) BS01 rna ? GO:0000028 ... P0AG59 31189921
    524963 6osq:t (3.5) BS01 rna ? GO:0000028 ... P0ADZ4 31189921
    524964 6osq:t (3.5) BS02 rna ? GO:0000028 ... P0ADZ4 31189921
    524965 6osq:u (3.5) BS01 rna ? GO:0000028 ... P0A7T3 31189921
    524966 6osq:v (3.5) BS01 rna ? GO:0000028 ... P0AG63 31189921
    524967 6osq:w (3.5) BS01 rna ? GO:0003735 ... P0A7T7 31189921
    524968 6osq:x (3.5) BS01 rna ? GO:0000028 ... P0A7U3 31189921
    524969 6osq:y (3.5) BS01 rna ? GO:0000028 ... P0A7U7 31189921
    524970 6osq:z (3.5) BS01 rna ? GO:0000028 ... P68679 31189921
    524971 6ost:7 (4.2) BS01 rna ? GO:0003747 ... P07012 31189921
    524972 6ost:7 (4.2) BS02 rna ? GO:0003747 ... P07012 31189921
    524973 6ost:7 (4.2) BS03 rna ? GO:0003747 ... P07012 31189921
    524974 6ost:B (4.2) BS01 rna ? GO:0000027 ... P60422 31189921
    524975 6ost:C (4.2) BS01 rna ? GO:0000027 ... P60438 31189921
    524976 6ost:D (4.2) BS01 rna ? GO:0001070 ... P60723 31189921
    524977 6ost:E (4.2) BS01 rna ? GO:0000027 ... P62399 31189921
    524978 6ost:E (4.2) BS02 rna ? GO:0000027 ... P62399 31189921
    524979 6ost:E (4.2) BS03 rna ? GO:0000027 ... P62399 31189921
    524980 6ost:F (4.2) BS01 rna ? GO:0000027 ... P0AG55 31189921
    524981 6ost:G (4.2) BS01 rna ? GO:0002181 ... P0A7R1 31189921
    524982 6ost:J (4.2) BS01 rna ? GO:0002181 ... P0AA10 31189921
    524983 6ost:K (4.2) BS01 rna ? GO:0002181 ... P0ADY3 31189921
    524984 6ost:K (4.2) BS02 rna ? GO:0002181 ... P0ADY3 31189921
    524985 6ost:L (4.2) BS01 rna ? GO:0002181 ... P02413 31189921
    524986 6ost:M (4.2) BS01 rna ? GO:0000027 ... P0ADY7 31189921
    524987 6ost:M (4.2) BS02 rna ? GO:0000027 ... P0ADY7 31189921
    524988 6ost:N (4.2) BS01 rna ? GO:0000027 ... P0AG44 31189921
    524989 6ost:O (4.2) BS01 rna ? GO:0002181 ... P0C018 31189921
    524990 6ost:O (4.2) BS02 rna ? GO:0002181 ... P0C018 31189921
    524991 6ost:P (4.2) BS01 rna ? GO:0000027 ... P0A7K6 31189921
    524992 6ost:P (4.2) BS02 rna ? GO:0000027 ... P0A7K6 31189921
    524993 6ost:Q (4.2) BS01 rna ? GO:0000027 ... P0A7L3 31189921
    524994 6ost:R (4.2) BS01 rna ? GO:0002181 ... P0AG48 31189921
    524995 6ost:S (4.2) BS01 rna ? GO:0002181 ... P61175 31189921
    524996 6ost:T (4.2) BS01 rna ? GO:0000027 ... P0ADZ0 31189921
    524997 6ost:U (4.2) BS01 rna ? GO:0000027 ... P60624 31189921
    524998 6ost:V (4.2) BS01 rna ? GO:0000027 ... P68919 31189921
    524999 6ost:W (4.2) BS01 rna ? GO:0003735 ... P0A7L8 31189921
    525000 6ost:W (4.2) BS02 rna ? GO:0003735 ... P0A7L8 31189921

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).