SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    525401 6oul:L (3.4) BS02 dna ? GO:0000345 ... P00579 31841111
    525402 6oul:L (3.4) BS03 1N7 ? GO:0000345 ... P00579 31841111
    525403 6oul:R (3.4) BS01 dna 2.7.7.6 GO:0000345 ... P0A7Z4 31841111
    525404 6oum:A (1.559) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    525405 6oum:A (1.559) BS02 N7J 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    525406 6oun:A (2.656) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 31301259
    525407 6oun:A (2.656) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 31301259
    525408 6oun:A (2.656) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 31301259
    525409 6oun:A (2.656) BS04 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 31301259
    525410 6oun:A (2.656) BS05 1RZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 31301259
    525411 6ouo:A (3.7) BS01 rna ? GO:0003747 ... P07012 31189921
    525412 6ouo:A (3.7) BS02 rna ? GO:0003747 ... P07012 31189921
    525413 6ouo:A (3.7) BS03 rna ? GO:0003747 ... P07012 31189921
    525414 6ouo:A (3.7) BS04 rna ? GO:0003747 ... P07012 31189921
    525415 6ouo:B (3.7) BS01 rna ? GO:0000027 ... P60422 31189921
    525416 6ouo:C (3.7) BS01 rna ? GO:0000027 ... P60438 31189921
    525417 6ouo:D (3.7) BS01 rna ? GO:0001070 ... P60723 31189921
    525418 6ouo:E (3.7) BS01 rna ? GO:0000027 ... P62399 31189921
    525419 6ouo:E (3.7) BS02 rna ? GO:0000027 ... P62399 31189921
    525420 6ouo:E (3.7) BS03 rna ? GO:0000027 ... P62399 31189921
    525421 6ouo:F (3.7) BS01 rna ? GO:0000027 ... P0AG55 31189921
    525422 6ouo:G (3.7) BS01 rna ? GO:0002181 ... P0A7R1 31189921
    525423 6ouo:J (3.7) BS01 rna ? GO:0002181 ... P0AA10 31189921
    525424 6ouo:K (3.7) BS01 rna ? GO:0002181 ... P0ADY3 31189921
    525425 6ouo:K (3.7) BS02 rna ? GO:0002181 ... P0ADY3 31189921
    525426 6ouo:L (3.7) BS01 rna ? GO:0002181 ... P02413 31189921
    525427 6ouo:M (3.7) BS01 rna ? GO:0000027 ... P0ADY7 31189921
    525428 6ouo:M (3.7) BS02 rna ? GO:0000027 ... P0ADY7 31189921
    525429 6ouo:N (3.7) BS01 rna ? GO:0000027 ... P0AG44 31189921
    525430 6ouo:O (3.7) BS01 rna ? GO:0002181 ... P0C018 31189921
    525431 6ouo:O (3.7) BS02 rna ? GO:0002181 ... P0C018 31189921
    525432 6ouo:P (3.7) BS01 rna ? GO:0000027 ... P0A7K6 31189921
    525433 6ouo:P (3.7) BS02 rna ? GO:0000027 ... P0A7K6 31189921
    525434 6ouo:Q (3.7) BS01 rna ? GO:0000027 ... P0A7L3 31189921
    525435 6ouo:R (3.7) BS01 rna ? GO:0002181 ... P0AG48 31189921
    525436 6ouo:S (3.7) BS01 rna ? GO:0002181 ... P61175 31189921
    525437 6ouo:T (3.7) BS01 rna ? GO:0000027 ... P0ADZ0 31189921
    525438 6ouo:U (3.7) BS01 rna ? GO:0000027 ... P60624 31189921
    525439 6ouo:V (3.7) BS01 rna ? GO:0000027 ... P68919 31189921
    525440 6ouo:V (3.7) BS02 rna ? GO:0000027 ... P68919 31189921
    525441 6ouo:W (3.7) BS01 rna ? GO:0003735 ... P0A7L8 31189921
    525442 6ouo:W (3.7) BS02 rna ? GO:0003735 ... P0A7L8 31189921
    525443 6ouo:X (3.7) BS01 rna ? GO:0000027 ... P0A7M2 31189921
    525444 6ouo:Y (3.7) BS01 rna ? GO:0000027 ... P0A7M6 31189921
    525445 6ouo:Z (3.7) BS01 rna ? GO:0000027 ... P0AG51 31189921
    525446 6ouo:Z (3.7) BS02 rna ? GO:0000027 ... P0AG51 31189921
    525447 6ouo:a (3.7) BS01 rna ? GO:0002181 ... P0A7M9 31189921
    525448 6ouo:a (3.7) BS02 rna ? GO:0002181 ... P0A7M9 31189921
    525449 6ouo:a (3.7) BS03 ZN ? GO:0002181 ... P0A7M9 31189921
    525450 6ouo:b (3.7) BS01 rna ? GO:0000027 ... P0A7N4 31189921
    525451 6ouo:b (3.7) BS02 MG ? GO:0000027 ... P0A7N4 31189921
    525452 6ouo:c (3.7) BS01 rna ? GO:0000027 ... P0A7N9 31189921
    525453 6ouo:d (3.7) BS01 rna ? GO:0002181 ... P0A7P5 31189921
    525454 6ouo:e (3.7) BS01 rna ? GO:0002181 ... P0A7Q1 31189921
    525455 6ouo:f (3.7) BS01 rna ? GO:0002181 ... P0A7Q6 31189921
    525456 6ouo:f (3.7) BS02 ZN ? GO:0002181 ... P0A7Q6 31189921
    525457 6ouo:g (3.7) BS01 rna ? GO:0000028 ... P0A7V0 31189921
    525458 6ouo:h (3.7) BS01 rna ? GO:0003676 ... P0A7V3 31189921
    525459 6ouo:i (3.7) BS01 rna ? GO:0000028 ... P0A7V8 31189921
    525460 6ouo:i (3.7) BS02 MG ? GO:0000028 ... P0A7V8 31189921
    525461 6ouo:j (3.7) BS01 rna ? GO:0000028 ... P0A7W1 31189921
    525462 6ouo:k (3.7) BS01 rna ? GO:0003735 ... P02358 31189921
    525463 6ouo:l (3.7) BS01 rna ? GO:0003723 ... P02359 31189921
    525464 6ouo:m (3.7) BS01 rna ? GO:0000028 ... P0A7W7 31189921
    525465 6ouo:n (3.7) BS01 rna ? GO:0000049 ... P0A7X3 31189921
    525466 6ouo:n (3.7) BS02 rna ? GO:0000049 ... P0A7X3 31189921
    525467 6ouo:o (3.7) BS01 rna ? GO:0000049 ... P0A7R5 31189921
    525468 6ouo:p (3.7) BS01 rna ? GO:0002181 ... P0A7R9 31189921
    525469 6ouo:q (3.7) BS01 rna ? GO:0003735 ... P0A7S3 31189921
    525470 6ouo:r (3.7) BS01 rna ? GO:0000049 ... P0A7S9 31189921
    525471 6ouo:r (3.7) BS02 rna ? GO:0000049 ... P0A7S9 31189921
    525472 6ouo:s (3.7) BS01 rna ? GO:0000028 ... P0AG59 31189921
    525473 6ouo:t (3.7) BS01 rna ? GO:0000028 ... P0ADZ4 31189921
    525474 6ouo:t (3.7) BS02 rna ? GO:0000028 ... P0ADZ4 31189921
    525475 6ouo:u (3.7) BS01 rna ? GO:0000028 ... P0A7T3 31189921
    525476 6ouo:v (3.7) BS01 rna ? GO:0000028 ... P0AG63 31189921
    525477 6ouo:w (3.7) BS01 rna ? GO:0003735 ... P0A7T7 31189921
    525478 6ouo:x (3.7) BS01 rna ? GO:0000028 ... P0A7U3 31189921
    525479 6ouo:y (3.7) BS01 rna ? GO:0000028 ... P0A7U7 31189921
    525480 6ouo:z (3.7) BS01 rna ? GO:0000028 ... P68679 31189921
    525481 6ous:N (3.4) BS01 BMA N/A N/A N/A 31515478
    525482 6ous:N (3.4) BS02 MAN N/A N/A N/A 31515478
    525483 6ous:P (3.4) BS01 MAN N/A N/A N/A 31515478
    525484 6ous:R (3.4) BS01 MAN N/A N/A N/A 31515478
    525485 6ous:T (3.4) BS01 MAN N/A N/A N/A 31515478
    525486 6ous:V (3.4) BS01 MAN N/A N/A N/A 31515478
    525487 6ous:X (3.4) BS01 MAN N/A N/A N/A 31515478
    525488 6ouv:A (1.937) BS01 TDK 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525489 6ouv:A (1.937) BS02 MG 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525490 6ouv:B (1.937) BS01 TDK 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525491 6ouv:B (1.937) BS02 MG 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525492 6ouw:A (2.398) BS01 HTL 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525493 6ouw:A (2.398) BS02 MG 2.2.1.7 GO:0000287 ... Q9RUB5 31239351
    525494 6ov0:A (2.8) BS01 rna ? N/A B6YWC3 31326273
    525495 6ov0:A (2.8) BS02 rna ? N/A B6YWC3 31326273
    525496 6ov0:B (2.8) BS01 rna ? N/A B6YWC3 31326273
    525497 6ov0:B (2.8) BS02 rna ? N/A B6YWC3 31326273
    525498 6ov0:C (2.8) BS01 rna ? N/A B6YWC3 31326273
    525499 6ov0:C (2.8) BS02 rna ? N/A B6YWC3 31326273
    525500 6ov0:D (2.8) BS01 rna ? N/A B6YWC3 31326273
    525501 6ov0:D (2.8) BS02 rna ? N/A B6YWC3 31326273
    525502 6ov6:A (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    525503 6ov6:B (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    525504 6ov6:C (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    525505 6ov7:A (1.71) BS01 peptide ? GO:0005794 ... Q9HD26 31697075
    525506 6ov7:B (1.71) BS01 peptide ? GO:0005794 ... Q9HD26 31697075
    525507 6ov8:A (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525508 6ov8:A (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525509 6ov8:B (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525510 6ov8:B (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525511 6ov8:C (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525512 6ov8:C (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525513 6ov8:D (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525514 6ov8:D (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525515 6ov8:E (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525516 6ov8:E (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525517 6ov8:F (2.61) BS01 ZN 3.4.11.23 GO:0004177 ... P37095 32306515
    525518 6ov8:F (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    525519 6ova:A (2.5) BS01 N9G 2.7.10.2 GO:0004672 ... P29597 31980341 MOAD: ic50=1.1nM
    BindingDB: IC50=1.1nM
    525520 6ovc:A (-1.00) BS01 N8J ? GO:0042981 ... Q07820 30254093
    525521 6ovd:A (2.102) BS01 GLY ? GO:0015276 ... P35439 N/A
    525522 6ovd:B (2.102) BS01 N9A ? GO:0015276 ... Q00959 N/A
    525523 6ove:A (2.0) BS01 GLY ? GO:0015276 ... P35439 N/A
    525524 6ove:B (2.0) BS01 N9D ? GO:0015276 ... Q00959 N/A
    525525 6ovf:A (1.95) BS01 peptide ? N/A P98082 N/A
    525526 6ovf:B (1.95) BS01 peptide ? N/A P98082 N/A
    525527 6ovf:B (1.95) BS02 MG ? N/A P98082 N/A
    525528 6ovh:A (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525529 6ovh:A (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525530 6ovh:A (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525531 6ovh:A (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525532 6ovh:B (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525533 6ovh:B (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525534 6ovh:B (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525535 6ovh:B (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525536 6ovh:C (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525537 6ovh:C (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525538 6ovh:C (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525539 6ovh:C (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525540 6ovh:D (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525541 6ovh:D (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525542 6ovh:D (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525543 6ovh:D (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525544 6ovh:E (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525545 6ovh:E (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525546 6ovh:E (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525547 6ovh:E (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525548 6ovh:F (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525549 6ovh:F (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525550 6ovh:F (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525551 6ovh:F (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525552 6ovh:G (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525553 6ovh:G (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525554 6ovh:G (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525555 6ovh:G (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525556 6ovh:H (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525557 6ovh:H (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525558 6ovh:H (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525559 6ovh:H (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525560 6ovh:I (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    525561 6ovh:I (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525562 6ovh:I (2.6) BS03 ZN ? GO:0005506 ... P0ABE7 31969701
    525563 6ovh:I (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525564 6ovh:J (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525565 6ovh:J (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525566 6ovh:J (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525567 6ovh:J (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525568 6ovh:K (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525569 6ovh:K (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525570 6ovh:K (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525571 6ovh:K (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525572 6ovh:L (2.6) BS01 ZN ? GO:0005506 ... P0ABE7 31969701
    525573 6ovh:L (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 31969701
    525574 6ovh:L (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    525575 6ovh:L (2.6) BS04 ZN ? GO:0005506 ... P0ABE7 31969701
    525576 6ovi:A (1.6) BS01 PVO 4.1.2.14 GO:0008675 ... Q5ZYF2 N/A
    525577 6ovi:B (1.6) BS01 PVO 4.1.2.14 GO:0008675 ... Q5ZYF2 N/A
    525578 6ovi:C (1.6) BS01 PVO 4.1.2.14 GO:0008675 ... Q5ZYF2 N/A
    525579 6ovl:A (2.1) BS01 NAP 1.1.1.79
    1.1.1.81
    GO:0005737 ... P75913 N/A
    525580 6ovr:C (2.843) BS01 dna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525581 6ovr:C (2.843) BS02 rna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525582 6ovr:D (2.843) BS01 dna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525583 6ovr:D (2.843) BS02 rna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525584 6ovr:D (2.843) BS03 POP 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525585 6ovr:D (2.843) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525586 6ovr:D (2.843) BS05 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525587 6ovr:D (2.843) BS06 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525588 6ovr:F (2.843) BS01 dna ? GO:0003677 ... Q5SKW1 31965171
    525589 6ovr:F (2.843) BS02 dna ? GO:0003677 ... Q5SKW1 31965171
    525590 6ovt:A (1.88) BS01 MG 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525591 6ovt:A (1.88) BS02 FES 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525592 6ovt:B (1.88) BS01 MG 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525593 6ovt:B (1.88) BS02 FES 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525594 6ovt:C (1.88) BS01 FES 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525595 6ovt:C (1.88) BS02 MG 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525596 6ovt:D (1.88) BS01 MG 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525597 6ovt:D (1.88) BS02 FES 4.2.1.9 GO:0000287 ... P9WKJ5 31315931
    525598 6ovx:A (2.1) BS01 NAP ? GO:0016491 ... Q194Q1 31702856
    525599 6ovx:B (2.1) BS01 NAP ? GO:0016491 ... Q194Q1 31702856
    525600 6ovy:C (2.999) BS01 dna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).