SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    525601 6ovy:C (2.999) BS02 rna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525602 6ovy:D (2.999) BS01 dna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525603 6ovy:D (2.999) BS02 dna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525604 6ovy:D (2.999) BS03 rna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525605 6ovy:D (2.999) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525606 6ovy:D (2.999) BS05 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525607 6ovy:D (2.999) BS06 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525608 6ovy:F (2.999) BS01 dna ? GO:0003677 ... Q5SKW1 31965171
    525609 6ovz:A (2.017) BS01 ZN 3.5.2.6 N/A E5KIY2 31145588
    525610 6ovz:A (2.017) BS02 ZN 3.5.2.6 N/A E5KIY2 31145588
    525611 6ovz:A (2.017) BS03 ZN 3.5.2.6 N/A E5KIY2 31145588
    525612 6ovz:A (2.017) BS04 CA 3.5.2.6 N/A E5KIY2 31145588
    525613 6ovz:A (2.017) BS05 N9M 3.5.2.6 N/A E5KIY2 31145588
    525614 6ovz:B (2.017) BS01 N9J 3.5.2.6 N/A E5KIY2 31145588
    525615 6ovz:B (2.017) BS02 ZN 3.5.2.6 N/A E5KIY2 31145588
    525616 6ovz:B (2.017) BS03 ZN 3.5.2.6 N/A E5KIY2 31145588
    525617 6ovz:B (2.017) BS04 ZN 3.5.2.6 N/A E5KIY2 31145588
    525618 6ovz:B (2.017) BS05 CA 3.5.2.6 N/A E5KIY2 31145588
    525619 6ow0:A (2.67) BS01 NAP ? GO:0016491 ... Q194Q1 31702856
    525620 6ow0:B (2.67) BS01 NAP ? GO:0016491 ... Q194Q1 31702856
    525621 6ow2:P (1.7) BS01 NB4 3.5.1.88 GO:0006412 ... Q8DP79 31160176 MOAD: ic50=3nM
    525622 6ow3:C (2.766) BS01 dna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525623 6ow3:C (2.766) BS02 dna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525624 6ow3:C (2.766) BS03 rna 2.7.7.6 GO:0000428 ... Q8RQE9 31965171
    525625 6ow3:D (2.766) BS01 dna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525626 6ow3:D (2.766) BS02 dna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525627 6ow3:D (2.766) BS03 rna 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525628 6ow3:D (2.766) BS04 POP 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525629 6ow3:D (2.766) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525630 6ow3:D (2.766) BS06 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525631 6ow3:D (2.766) BS07 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 31965171
    525632 6ow3:F (2.766) BS01 dna ? GO:0003677 ... Q5SKW1 31965171
    525633 6ow3:F (2.766) BS02 dna ? GO:0003677 ... Q5SKW1 31965171
    525634 6ow3:F (2.766) BS03 rna ? GO:0003677 ... Q5SKW1 31965171
    525635 6ow4:A (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525636 6ow4:B (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525637 6ow4:C (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525638 6ow4:D (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525639 6ow4:E (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525640 6ow4:F (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525641 6ow4:G (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525642 6ow4:H (1.99) BS01 NAD ? GO:0000166 ... A7A7R9 31209107
    525643 6ow7:P (1.45) BS01 N9Y 3.5.1.88 GO:0006412 ... Q8DP79 31160176 MOAD: ic50=1nM
    525644 6ow7:Q (1.45) BS01 N9Y 3.5.1.88 GO:0006412 ... Q8DP79 31160176 MOAD: ic50=1nM
    525645 6owc:A (1.85) BS01 ND1 ? N/A P03372 N/A
    525646 6owc:B (1.85) BS01 ND1 ? N/A P03372 N/A
    525647 6owe:A (1.72) BS01 NDP ? GO:0000166 ... E4N096 31243147
    525648 6owe:A (1.72) BS02 N9V ? GO:0000166 ... E4N096 31243147
    525649 6owe:B (1.72) BS01 NDP ? GO:0000166 ... E4N096 31243147
    525650 6owe:B (1.72) BS02 N9V ? GO:0000166 ... E4N096 31243147
    525651 6owe:C (1.72) BS01 N9V ? GO:0000166 ... E4N096 31243147
    525652 6owe:C (1.72) BS02 NDP ? GO:0000166 ... E4N096 31243147
    525653 6owe:D (1.72) BS01 N9V ? GO:0000166 ... E4N096 31243147
    525654 6owe:D (1.72) BS02 NDP ? GO:0000166 ... E4N096 31243147
    525655 6owh:A (2.0) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    525656 6owh:A (2.0) BS02 NBJ 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    525657 6owi:A (1.75) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    525658 6owi:A (1.75) BS02 NB7 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    525659 6owm:A (1.1) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525660 6owm:A (1.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525661 6owm:A (1.1) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 31994873
    525662 6owm:A (1.1) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 31994873
    525663 6owm:B (1.1) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525664 6owm:B (1.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525665 6owm:B (1.1) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 31994873
    525666 6owm:B (1.1) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 31994873
    525667 6own:A (1.95) BS01 ZN 3.6.4.12 N/A A0R7F4 32665276
    525668 6own:B (1.95) BS01 ZN 3.6.4.12 N/A A0R7F4 32665276
    525669 6own:C (1.95) BS01 ZN 3.6.4.12 N/A A0R7F4 32665276
    525670 6owp:A (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525671 6owp:A (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525672 6owp:A (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 31994873
    525673 6owp:A (1.14) BS04 ETF 1.1.1.1 GO:0004022 ... P00327 31994873
    525674 6owp:B (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525675 6owp:B (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 31994873
    525676 6owp:B (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 31994873
    525677 6owp:B (1.14) BS04 ETF 1.1.1.1 GO:0004022 ... P00327 31994873
    525678 6owt:N (3.8) BS01 peptide ? GO:0005525 ... C3VHQ5
    Q4JGV0
    31447307
    525679 6owu:F (1.84) BS01 ZN ? GO:0030908 ... Q6TER0 31600193
    525680 6owx:B (2.06) BS01 ZN ? GO:0042597 ... P77754 31793902
    525681 6ox0:A (1.755) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525682 6ox0:A (1.755) BS02 SFG 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525683 6ox0:B (1.755) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525684 6ox0:B (1.755) BS02 SFG 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525685 6ox1:A (1.949) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525686 6ox1:A (1.949) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525687 6ox1:B (1.949) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525688 6ox1:B (1.949) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525689 6ox2:A (2.089) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525690 6ox2:A (2.089) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525691 6ox2:B (2.089) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525692 6ox2:B (2.089) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525693 6ox3:A (1.785) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525694 6ox3:A (1.785) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525695 6ox3:B (1.785) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525696 6ox3:B (1.785) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525697 6ox4:A (2.294) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525698 6ox4:A (2.294) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525699 6ox4:B (2.294) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525700 6ox4:B (2.294) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525701 6ox5:A (2.098) BS01 peptide 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525702 6ox5:A (2.098) BS02 SAH 2.1.1.85 GO:0000785 ... Q86TU7 31388018
    525703 6oxa:QB (3.25) BS01 rna ? GO:0003735 ... P80371 31501867
    525704 6oxa:QC (3.25) BS01 rna ? GO:0003676 ... P80372 31501867
    525705 6oxa:QD (3.25) BS01 rna ? GO:0003723 ... P80373 31501867
    525706 6oxa:QD (3.25) BS02 SF4 ? GO:0003723 ... P80373 31501867
    525707 6oxa:QD (3.25) BS03 MG ? GO:0003723 ... P80373 31501867
    525708 6oxa:QE (3.25) BS01 rna ? GO:0003723 ... Q5SHQ5 31501867
    525709 6oxa:QF (3.25) BS01 rna ? GO:0003735 ... Q5SLP8 31501867
    525710 6oxa:QF (3.25) BS02 MG ? GO:0003735 ... Q5SLP8 31501867
    525711 6oxa:QG (3.25) BS01 rna ? GO:0000049 ... P17291 31501867
    525712 6oxa:QG (3.25) BS02 rna ? GO:0000049 ... P17291 31501867
    525713 6oxa:QH (3.25) BS01 rna ? GO:0003735 ... P0DOY9 31501867
    525714 6oxa:QI (3.25) BS01 rna ? GO:0000049 ... P80374 31501867
    525715 6oxa:QI (3.25) BS02 rna ? GO:0000049 ... P80374 31501867
    525716 6oxa:QJ (3.25) BS01 rna ? GO:0000049 ... Q5SHN7 31501867
    525717 6oxa:QK (3.25) BS01 rna ? GO:0003735 ... P80376 31501867
    525718 6oxa:QL (3.25) BS01 rna ? GO:0000049 ... Q5SHN3 31501867
    525719 6oxa:QM (3.25) BS01 rna ? GO:0000049 ... P80377 31501867
    525720 6oxa:QN (3.25) BS01 rna ? GO:0003735 ... P0DOY6 31501867
    525721 6oxa:QN (3.25) BS02 ZN ? GO:0003735 ... P0DOY6 31501867
    525722 6oxa:QO (3.25) BS01 rna ? GO:0003735 ... Q5SJ76 31501867
    525723 6oxa:QO (3.25) BS02 rna ? GO:0003735 ... Q5SJ76 31501867
    525724 6oxa:QP (3.25) BS01 rna ? GO:0003735 ... Q5SJH3 31501867
    525725 6oxa:QQ (3.25) BS01 rna ? GO:0003735 ... P0DOY7 31501867
    525726 6oxa:QR (3.25) BS01 rna ? GO:0003735 ... Q5SLQ0 31501867
    525727 6oxa:QS (3.25) BS01 rna ? GO:0000028 ... Q5SHP2 31501867
    525728 6oxa:QT (3.25) BS01 rna ? GO:0003723 ... P80380 31501867
    525729 6oxa:QY (3.25) BS01 rna 3.1.-.- GO:0004519 ... J7QFC0 31501867
    525730 6oxa:QY (3.25) BS02 rna 3.1.-.- GO:0004519 ... J7QFC0 31501867
    525731 6oxa:QZ (3.25) BS01 rna 3.1.-.- GO:0004519 ... J7QFC0 31501867
    525732 6oxa:R0 (3.25) BS01 rna ? GO:0003735 ... P60493 31501867
    525733 6oxa:R0 (3.25) BS02 rna ? GO:0003735 ... P60493 31501867
    525734 6oxa:R0 (3.25) BS03 rna ? GO:0003735 ... P60493 31501867
    525735 6oxa:R0 (3.25) BS04 MG ? GO:0003735 ... P60493 31501867
    525736 6oxa:R1 (3.25) BS01 rna ? GO:0003735 ... P60494 31501867
    525737 6oxa:R2 (3.25) BS01 rna ? GO:0003735 ... Q5SHP6 31501867
    525738 6oxa:R3 (3.25) BS01 rna ? GO:0003735 ... Q5SHQ6 31501867
    525739 6oxa:R3 (3.25) BS02 rna ? GO:0003735 ... Q5SHQ6 31501867
    525740 6oxa:R4 (3.25) BS01 rna ? GO:0003735 ... Q5SJE1 31501867
    525741 6oxa:R5 (3.25) BS01 rna ? GO:0003735 ... P80339 31501867
    525742 6oxa:R5 (3.25) BS02 ZN ? GO:0003735 ... P80339 31501867
    525743 6oxa:R6 (3.25) BS01 rna ? GO:0000049 ... P35871 31501867
    525744 6oxa:R6 (3.25) BS02 ZN ? GO:0000049 ... P35871 31501867
    525745 6oxa:R7 (3.25) BS01 rna ? GO:0003735 ... P80340 31501867
    525746 6oxa:R8 (3.25) BS01 rna ? GO:0003735 ... Q5SKU1 31501867
    525747 6oxa:R9 (3.25) BS01 rna ? GO:0003735 ... Q5SHR2 31501867
    525748 6oxa:R9 (3.25) BS02 ZN ? GO:0003735 ... Q5SHR2 31501867
    525749 6oxa:RD (3.25) BS01 rna ? GO:0002181 ... P60405 31501867
    525750 6oxa:RD (3.25) BS02 rna ? GO:0002181 ... P60405 31501867
    525751 6oxa:RD (3.25) BS03 MG ? GO:0002181 ... P60405 31501867
    525752 6oxa:RE (3.25) BS01 rna ? GO:0003735 ... Q5SHN8 31501867
    525753 6oxa:RF (3.25) BS01 rna ? GO:0003735 ... Q5SHN9 31501867
    525754 6oxa:RF (3.25) BS02 MG ? GO:0003735 ... Q5SHN9 31501867
    525755 6oxa:RG (3.25) BS01 rna ? GO:0000049 ... Q5SHQ0 31501867
    525756 6oxa:RG (3.25) BS02 rna ? GO:0000049 ... Q5SHQ0 31501867
    525757 6oxa:RG (3.25) BS03 rna ? GO:0000049 ... Q5SHQ0 31501867
    525758 6oxa:RH (3.25) BS01 rna ? GO:0002181 ... P0DOY8 31501867
    525759 6oxa:RI (3.25) BS01 rna ? GO:0003735 ... Q5SLQ1 31501867
    525760 6oxa:RN (3.25) BS01 rna ? GO:0003729 ... P60488 31501867
    525761 6oxa:RO (3.25) BS01 rna ? GO:0003735 ... Q5SHP8 31501867
    525762 6oxa:RO (3.25) BS02 rna ? GO:0003735 ... Q5SHP8 31501867
    525763 6oxa:RP (3.25) BS01 rna ? GO:0003735 ... Q5SHQ7 31501867
    525764 6oxa:RQ (3.25) BS01 rna ? GO:0000049 ... P60489 31501867
    525765 6oxa:RQ (3.25) BS02 rna ? GO:0000049 ... P60489 31501867
    525766 6oxa:RQ (3.25) BS03 MG ? GO:0000049 ... P60489 31501867
    525767 6oxa:RR (3.25) BS01 rna ? GO:0003735 ... Q9Z9H5 31501867
    525768 6oxa:RS (3.25) BS01 rna ? GO:0003735 ... Q5SHQ4 31501867
    525769 6oxa:RS (3.25) BS02 rna ? GO:0003735 ... Q5SHQ4 31501867
    525770 6oxa:RT (3.25) BS01 rna ? GO:0003735 ... P60490 31501867
    525771 6oxa:RT (3.25) BS02 rna ? GO:0003735 ... P60490 31501867
    525772 6oxa:RU (3.25) BS01 rna ? GO:0000027 ... P60491 31501867
    525773 6oxa:RV (3.25) BS01 rna ? GO:0003723 ... P60492 31501867
    525774 6oxa:RW (3.25) BS01 rna ? GO:0003735 ... Q5SHP3 31501867
    525775 6oxa:RX (3.25) BS01 rna ? GO:0003735 ... Q5SHP0 31501867
    525776 6oxa:RY (3.25) BS01 rna ? GO:0003723 ... Q5SHP9 31501867
    525777 6oxa:RY (3.25) BS02 MG ? GO:0003723 ... Q5SHP9 31501867
    525778 6oxa:RZ (3.25) BS01 rna ? GO:0003723 ... Q5SHZ1 31501867
    525779 6oxa:RZ (3.25) BS02 rna ? GO:0003723 ... Q5SHZ1 31501867
    525780 6oxa:XB (3.25) BS01 rna ? GO:0003735 ... P80371 31501867
    525781 6oxa:XC (3.25) BS01 rna ? GO:0003676 ... P80372 31501867
    525782 6oxa:XD (3.25) BS01 rna ? GO:0003723 ... P80373 31501867
    525783 6oxa:XD (3.25) BS02 SF4 ? GO:0003723 ... P80373 31501867
    525784 6oxa:XE (3.25) BS01 rna ? GO:0003723 ... Q5SHQ5 31501867
    525785 6oxa:XE (3.25) BS02 MG ? GO:0003723 ... Q5SHQ5 31501867
    525786 6oxa:XF (3.25) BS01 rna ? GO:0003735 ... Q5SLP8 31501867
    525787 6oxa:XF (3.25) BS02 MG ? GO:0003735 ... Q5SLP8 31501867
    525788 6oxa:XG (3.25) BS01 rna ? GO:0000049 ... P17291 31501867
    525789 6oxa:XG (3.25) BS02 rna ? GO:0000049 ... P17291 31501867
    525790 6oxa:XH (3.25) BS01 rna ? GO:0003735 ... P0DOY9 31501867
    525791 6oxa:XI (3.25) BS01 rna ? GO:0000049 ... P80374 31501867
    525792 6oxa:XJ (3.25) BS01 rna ? GO:0000049 ... Q5SHN7 31501867
    525793 6oxa:XK (3.25) BS01 rna ? GO:0003735 ... P80376 31501867
    525794 6oxa:XL (3.25) BS01 rna ? GO:0000049 ... Q5SHN3 31501867
    525795 6oxa:XM (3.25) BS01 rna ? GO:0000049 ... P80377 31501867
    525796 6oxa:XM (3.25) BS02 rna ? GO:0000049 ... P80377 31501867
    525797 6oxa:XM (3.25) BS03 MG ? GO:0000049 ... P80377 31501867
    525798 6oxa:XN (3.25) BS01 rna ? GO:0003735 ... P0DOY6 31501867
    525799 6oxa:XN (3.25) BS02 ZN ? GO:0003735 ... P0DOY6 31501867
    525800 6oxa:XO (3.25) BS01 rna ? GO:0003735 ... Q5SJ76 31501867

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).