SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    527001 6p5i:T (3.1) BS01 rna ? GO:0003676 ... G1TPG3 31609474
    527002 6p5i:U (3.1) BS01 rna ? GO:0000028 ... G1TN62 31609474
    527003 6p5i:V (3.1) BS01 rna ? GO:0003723 ... G1SIZ2 31609474
    527004 6p5i:X (3.1) BS01 rna ? GO:0003735 ... G1TG89 31609474
    527005 6p5i:Y (3.1) BS01 rna ? GO:0003735 ... G1SZ47 31609474
    527006 6p5i:Z (3.1) BS01 rna ? GO:0003735 ... G1T3D8 31609474
    527007 6p5i:a (3.1) BS01 rna ? GO:0003735 ... G1TDB3 31609474
    527008 6p5i:a (3.1) BS02 rna ? GO:0003735 ... G1TDB3 31609474
    527009 6p5i:b (3.1) BS01 rna ? GO:0003729 ... G1TFE8 31609474
    527010 6p5i:c (3.1) BS01 rna ? GO:0003735 ... G1TZ76 31609474
    527011 6p5i:d (3.1) BS01 rna ? GO:0000028 ... G1TIB4 31609474
    527012 6p5i:e (3.1) BS01 rna ? GO:0002181 ... G1U7M4 31609474
    527013 6p5i:f (3.1) BS01 rna ? GO:0003735 ... G1T8A2 31609474
    527014 6p5i:g (3.1) BS01 rna ? GO:0003735 ... G1SK22 31609474
    527015 6p5i:h (3.1) BS01 rna ? GO:0001891 ... G1SJB4 31609474
    527016 6p5j:AA (3.1) BS01 rna ? GO:0002181 ... G1TT27 31609474
    527017 6p5j:AA (3.1) BS02 rna ? GO:0002181 ... G1TT27 31609474
    527018 6p5j:AB (3.1) BS01 rna ? GO:0003723 ... G1TL06 31609474
    527019 6p5j:AC (3.1) BS01 rna ? GO:0003735 ... G1SVW5 31609474
    527020 6p5j:AC (3.1) BS02 rna ? GO:0003735 ... G1SVW5 31609474
    527021 6p5j:AD (3.1) BS01 rna ? GO:0000027 ... P19949 31609474
    527022 6p5j:AD (3.1) BS02 rna ? GO:0000027 ... P19949 31609474
    527023 6p5j:AE (3.1) BS01 rna ? GO:0000027 ... G1SKF7 31609474
    527024 6p5j:AF (3.1) BS01 rna ? GO:0000463 ... G1SV32 31609474
    527025 6p5j:AF (3.1) BS02 rna ? GO:0000463 ... G1SV32 31609474
    527026 6p5j:AG (3.1) BS01 rna ? GO:0003723 ... G1STW0 31609474
    527027 6p5j:AG (3.1) BS02 rna ? GO:0003723 ... G1STW0 31609474
    527028 6p5j:AH (3.1) BS01 rna ? GO:0002181 ... G1SWI6 31609474
    527029 6p5j:AI (3.1) BS01 rna ? GO:0003735 ... B7NZQ2 31609474
    527030 6p5j:AI (3.1) BS02 rna ? GO:0003735 ... B7NZQ2 31609474
    527031 6p5j:AI (3.1) BS03 rna ? GO:0003735 ... B7NZQ2 31609474
    527032 6p5j:AJ (3.1) BS01 rna ? GO:0003735 ... G1TUB8 31609474
    527033 6p5j:AJ (3.1) BS02 rna ? GO:0003735 ... G1TUB8 31609474
    527034 6p5j:AK (3.1) BS01 rna ? GO:0003723 ... G1SKZ8 31609474
    527035 6p5j:AK (3.1) BS02 rna ? GO:0003723 ... G1SKZ8 31609474
    527036 6p5j:AL (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527037 6p5j:AL (3.1) BS02 rna N/A GO:0003735 ... N/A 31609474
    527038 6p5j:AM (3.1) BS01 rna ? GO:0003723 ... G1SZ12 31609474
    527039 6p5j:AN (3.1) BS01 rna ? GO:0002181 ... G1T0C1 31609474
    527040 6p5j:AN (3.1) BS02 rna ? GO:0002181 ... G1T0C1 31609474
    527041 6p5j:AO (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527042 6p5j:AP (3.1) BS01 rna ? GO:0002181 ... G1SCJ6 31609474
    527043 6p5j:AP (3.1) BS02 rna ? GO:0002181 ... G1SCJ6 31609474
    527044 6p5j:AQ (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527045 6p5j:AR (3.1) BS01 rna ? GO:0003723 ... G1TJR3 31609474
    527046 6p5j:AR (3.1) BS02 rna ? GO:0003723 ... G1TJR3 31609474
    527047 6p5j:AS (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527048 6p5j:AS (3.1) BS02 rna N/A GO:0003735 ... N/A 31609474
    527049 6p5j:AT (3.1) BS01 rna ? GO:0003735 ... G1SHQ2 31609474
    527050 6p5j:AT (3.1) BS02 rna ? GO:0003735 ... G1SHQ2 31609474
    527051 6p5j:AU (3.1) BS01 rna ? GO:0002181 ... G1TSG1 31609474
    527052 6p5j:AV (3.1) BS01 rna ? GO:0003735 ... G1T6D1 31609474
    527053 6p5j:AV (3.1) BS02 rna ? GO:0003735 ... G1T6D1 31609474
    527054 6p5j:AW (3.1) BS01 rna ? GO:0000027 ... G1SE28 31609474
    527055 6p5j:AX (3.1) BS01 rna ? GO:0003735 ... G1SE76 31609474
    527056 6p5j:AX (3.1) BS02 rna ? GO:0003735 ... G1SE76 31609474
    527057 6p5j:AY (3.1) BS01 rna ? GO:0003723 ... G1SQH0 31609474
    527058 6p5j:AY (3.1) BS02 rna ? GO:0003723 ... G1SQH0 31609474
    527059 6p5j:AZ (3.1) BS01 rna ? GO:0003735 ... G1TXF6 31609474
    527060 6p5j:Aa (3.1) BS01 rna ? GO:0003735 ... G1SNY0 31609474
    527061 6p5j:Ab (3.1) BS01 rna ? GO:0002181 ... G1SGR6 31609474
    527062 6p5j:Ac (3.1) BS01 rna ? GO:0002181 ... G1TDL2 31609474
    527063 6p5j:Ad (3.1) BS01 rna ? GO:0002181 ... G1SHG0 31609474
    527064 6p5j:Ae (3.1) BS01 rna ? GO:0003735 ... G1TUN8 31609474
    527065 6p5j:Af (3.1) BS01 rna ? GO:0000049 ... G1SF08 31609474
    527066 6p5j:Ag (3.1) BS01 rna ? GO:0003735 ... G1TXG5 31609474
    527067 6p5j:Ah (3.1) BS01 rna ? GO:0000463 ... G1SIT5 31609474
    527068 6p5j:Ah (3.1) BS02 rna ? GO:0000463 ... G1SIT5 31609474
    527069 6p5j:Ai (3.1) BS01 rna ? GO:0003735 ... G1TTQ5 31609474
    527070 6p5j:Aj (3.1) BS01 rna ? GO:0003723 ... U3KPD5 31609474
    527071 6p5j:Aj (3.1) BS02 rna ? GO:0003723 ... U3KPD5 31609474
    527072 6p5j:Ak (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527073 6p5j:Al (3.1) BS01 rna ? GO:0003735 ... G1TTN1 31609474
    527074 6p5j:Al (3.1) BS02 rna ? GO:0003735 ... G1TTN1 31609474
    527075 6p5j:Am (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527076 6p5j:Ao (3.1) BS01 rna ? GO:0003735 ... G1T040 31609474
    527077 6p5j:Ap (3.1) BS01 rna ? GO:0003735 ... G1SY53 31609474
    527078 6p5j:Ar (3.1) BS01 rna ? GO:0003735 ... G1U7L1 31609474
    527079 6p5j:B (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527080 6p5j:C (3.1) BS01 rna ? GO:0003735 ... G1SS70 31609474
    527081 6p5j:D (3.1) BS01 rna N/A GO:0003723 ... N/A 31609474
    527082 6p5j:E (3.1) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 31609474
    527083 6p5j:F (3.1) BS01 rna ? GO:0003723 ... G1TK17 31609474
    527084 6p5j:G (3.1) BS01 rna ? GO:0003723 ... G1TFM5 31609474
    527085 6p5j:G (3.1) BS02 rna ? GO:0003723 ... G1TFM5 31609474
    527086 6p5j:H (3.1) BS01 rna ? GO:0003735 ... G1TM55 31609474
    527087 6p5j:I (3.1) BS01 rna ? GO:0003735 ... G1SVB0 31609474
    527088 6p5j:J (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527089 6p5j:J (3.1) BS02 rna N/A GO:0003735 ... N/A 31609474
    527090 6p5j:K (3.1) BS01 rna ? GO:0003723 ... B7NZS8 31609474
    527091 6p5j:L (3.1) BS01 rna ? GO:0003723 ... G1TPV3 31609474
    527092 6p5j:M (3.1) BS01 rna ? GO:0003735 ... G1TRM4 31609474
    527093 6p5j:N (3.1) BS01 rna ? GO:0003735 ... G1SFR8 31609474
    527094 6p5j:O (3.1) BS01 rna ? GO:0003735 ... G1SP51 31609474
    527095 6p5j:P (3.1) BS01 rna ? GO:0003735 ... G1T1F0 31609474
    527096 6p5j:Q (3.1) BS01 rna ? GO:0000028 ... G1U0Q2 31609474
    527097 6p5j:Q (3.1) BS02 rna ? GO:0000028 ... G1U0Q2 31609474
    527098 6p5j:R (3.1) BS01 rna ? GO:0000462 ... G1SGX4 31609474
    527099 6p5j:S (3.1) BS01 rna ? GO:0003735 ... G1TU13 31609474
    527100 6p5j:T (3.1) BS01 rna ? GO:0003676 ... G1TPG3 31609474
    527101 6p5j:U (3.1) BS01 rna ? GO:0000028 ... G1TN62 31609474
    527102 6p5j:V (3.1) BS01 rna ? GO:0003723 ... G1SIZ2 31609474
    527103 6p5j:X (3.1) BS01 rna ? GO:0003735 ... G1TG89 31609474
    527104 6p5j:Y (3.1) BS01 rna ? GO:0003735 ... G1SZ47 31609474
    527105 6p5j:Z (3.1) BS01 rna ? GO:0003735 ... G1T3D8 31609474
    527106 6p5j:a (3.1) BS01 rna ? GO:0003735 ... G1TDB3 31609474
    527107 6p5j:a (3.1) BS02 rna ? GO:0003735 ... G1TDB3 31609474
    527108 6p5j:b (3.1) BS01 rna ? GO:0003729 ... G1TFE8 31609474
    527109 6p5j:c (3.1) BS01 rna ? GO:0003735 ... G1TZ76 31609474
    527110 6p5j:d (3.1) BS01 rna ? GO:0000028 ... G1TIB4 31609474
    527111 6p5j:e (3.1) BS01 rna ? GO:0002181 ... G1U7M4 31609474
    527112 6p5j:f (3.1) BS01 rna ? GO:0003735 ... G1T8A2 31609474
    527113 6p5j:g (3.1) BS01 rna ? GO:0003735 ... G1SK22 31609474
    527114 6p5j:h (3.1) BS01 rna ? GO:0001891 ... G1SJB4 31609474
    527115 6p5k:AA (3.1) BS01 rna ? GO:0002181 ... G1TT27 31609474
    527116 6p5k:AB (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527117 6p5k:AC (3.1) BS01 rna ? GO:0003735 ... G1SVW5 31609474
    527118 6p5k:AC (3.1) BS02 rna ? GO:0003735 ... G1SVW5 31609474
    527119 6p5k:AD (3.1) BS01 rna ? GO:0000027 ... P19949 31609474
    527120 6p5k:AD (3.1) BS02 rna ? GO:0000027 ... P19949 31609474
    527121 6p5k:AE (3.1) BS01 rna ? GO:0000027 ... G1SKF7 31609474
    527122 6p5k:AF (3.1) BS01 rna ? GO:0000463 ... G1SV32 31609474
    527123 6p5k:AF (3.1) BS02 rna ? GO:0000463 ... G1SV32 31609474
    527124 6p5k:AG (3.1) BS01 rna ? GO:0003723 ... G1STW0 31609474
    527125 6p5k:AG (3.1) BS02 rna ? GO:0003723 ... G1STW0 31609474
    527126 6p5k:AH (3.1) BS01 rna ? GO:0002181 ... G1SWI6 31609474
    527127 6p5k:AI (3.1) BS01 rna ? GO:0003735 ... B7NZQ2 31609474
    527128 6p5k:AI (3.1) BS02 rna ? GO:0003735 ... B7NZQ2 31609474
    527129 6p5k:AI (3.1) BS03 rna ? GO:0003735 ... B7NZQ2 31609474
    527130 6p5k:AJ (3.1) BS01 rna ? GO:0003735 ... G1TUB8 31609474
    527131 6p5k:AJ (3.1) BS02 rna ? GO:0003735 ... G1TUB8 31609474
    527132 6p5k:AK (3.1) BS01 rna ? GO:0003723 ... G1SKZ8 31609474
    527133 6p5k:AK (3.1) BS02 rna ? GO:0003723 ... G1SKZ8 31609474
    527134 6p5k:AL (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527135 6p5k:AL (3.1) BS02 rna N/A GO:0003735 ... N/A 31609474
    527136 6p5k:AM (3.1) BS01 rna ? GO:0003723 ... G1SZ12 31609474
    527137 6p5k:AN (3.1) BS01 rna ? GO:0002181 ... G1T0C1 31609474
    527138 6p5k:AN (3.1) BS02 rna ? GO:0002181 ... G1T0C1 31609474
    527139 6p5k:AO (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527140 6p5k:AP (3.1) BS01 rna ? GO:0002181 ... G1SCJ6 31609474
    527141 6p5k:AP (3.1) BS02 rna ? GO:0002181 ... G1SCJ6 31609474
    527142 6p5k:AQ (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527143 6p5k:AR (3.1) BS01 rna ? GO:0003723 ... G1TJR3 31609474
    527144 6p5k:AR (3.1) BS02 rna ? GO:0003723 ... G1TJR3 31609474
    527145 6p5k:AS (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527146 6p5k:AS (3.1) BS02 rna N/A GO:0003735 ... N/A 31609474
    527147 6p5k:AT (3.1) BS01 rna ? GO:0003735 ... G1SHQ2 31609474
    527148 6p5k:AT (3.1) BS02 rna ? GO:0003735 ... G1SHQ2 31609474
    527149 6p5k:AU (3.1) BS01 rna ? GO:0002181 ... G1TSG1 31609474
    527150 6p5k:AV (3.1) BS01 rna ? GO:0003735 ... G1T6D1 31609474
    527151 6p5k:AV (3.1) BS02 rna ? GO:0003735 ... G1T6D1 31609474
    527152 6p5k:AW (3.1) BS01 rna ? GO:0000027 ... G1SE28 31609474
    527153 6p5k:AX (3.1) BS01 rna ? GO:0003735 ... G1SE76 31609474
    527154 6p5k:AX (3.1) BS02 rna ? GO:0003735 ... G1SE76 31609474
    527155 6p5k:AY (3.1) BS01 rna ? GO:0003723 ... G1SQH0 31609474
    527156 6p5k:AY (3.1) BS02 rna ? GO:0003723 ... G1SQH0 31609474
    527157 6p5k:AZ (3.1) BS01 rna ? GO:0003735 ... G1TXF6 31609474
    527158 6p5k:Aa (3.1) BS01 rna ? GO:0003735 ... G1SNY0 31609474
    527159 6p5k:Ab (3.1) BS01 rna ? GO:0002181 ... G1SGR6 31609474
    527160 6p5k:Ac (3.1) BS01 rna ? GO:0002181 ... G1TDL2 31609474
    527161 6p5k:Ad (3.1) BS01 rna ? GO:0002181 ... G1SHG0 31609474
    527162 6p5k:Ae (3.1) BS01 rna ? GO:0003735 ... G1TUN8 31609474
    527163 6p5k:Af (3.1) BS01 rna ? GO:0000049 ... G1SF08 31609474
    527164 6p5k:Ag (3.1) BS01 rna ? GO:0003735 ... G1TXG5 31609474
    527165 6p5k:Ah (3.1) BS01 rna ? GO:0000463 ... G1SIT5 31609474
    527166 6p5k:Ah (3.1) BS02 rna ? GO:0000463 ... G1SIT5 31609474
    527167 6p5k:Ai (3.1) BS01 rna ? GO:0003735 ... G1TTQ5 31609474
    527168 6p5k:Aj (3.1) BS01 rna ? GO:0003723 ... U3KPD5 31609474
    527169 6p5k:Aj (3.1) BS02 rna ? GO:0003723 ... U3KPD5 31609474
    527170 6p5k:Ak (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527171 6p5k:Al (3.1) BS01 rna ? GO:0003735 ... G1TTN1 31609474
    527172 6p5k:Al (3.1) BS02 rna ? GO:0003735 ... G1TTN1 31609474
    527173 6p5k:Am (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527174 6p5k:Ao (3.1) BS01 rna ? GO:0003735 ... G1T040 31609474
    527175 6p5k:Ap (3.1) BS01 rna ? GO:0003735 ... G1SY53 31609474
    527176 6p5k:Ar (3.1) BS01 rna ? GO:0003735 ... G1U7L1 31609474
    527177 6p5k:B (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527178 6p5k:C (3.1) BS01 rna ? GO:0003735 ... G1SS70 31609474
    527179 6p5k:D (3.1) BS01 rna N/A GO:0003723 ... N/A 31609474
    527180 6p5k:E (3.1) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 31609474
    527181 6p5k:F (3.1) BS01 rna ? GO:0003723 ... G1TK17 31609474
    527182 6p5k:G (3.1) BS01 rna ? GO:0003723 ... G1TFM5 31609474
    527183 6p5k:G (3.1) BS02 rna ? GO:0003723 ... G1TFM5 31609474
    527184 6p5k:H (3.1) BS01 rna ? GO:0003735 ... G1TM55 31609474
    527185 6p5k:I (3.1) BS01 rna ? GO:0003735 ... G1SVB0 31609474
    527186 6p5k:J (3.1) BS01 rna N/A GO:0003735 ... N/A 31609474
    527187 6p5k:K (3.1) BS01 rna ? GO:0003723 ... B7NZS8 31609474
    527188 6p5k:L (3.1) BS01 rna ? GO:0003723 ... G1TPV3 31609474
    527189 6p5k:M (3.1) BS01 rna ? GO:0003735 ... G1TRM4 31609474
    527190 6p5k:N (3.1) BS01 rna ? GO:0003735 ... G1SFR8 31609474
    527191 6p5k:O (3.1) BS01 rna ? GO:0003735 ... G1SP51 31609474
    527192 6p5k:P (3.1) BS01 rna ? GO:0003735 ... G1T1F0 31609474
    527193 6p5k:Q (3.1) BS01 rna ? GO:0000028 ... G1U0Q2 31609474
    527194 6p5k:R (3.1) BS01 rna ? GO:0000462 ... G1SGX4 31609474
    527195 6p5k:S (3.1) BS01 rna ? GO:0003735 ... G1TU13 31609474
    527196 6p5k:T (3.1) BS01 rna ? GO:0003676 ... G1TPG3 31609474
    527197 6p5k:U (3.1) BS01 rna ? GO:0000028 ... G1TN62 31609474
    527198 6p5k:V (3.1) BS01 rna ? GO:0003723 ... G1SIZ2 31609474
    527199 6p5k:X (3.1) BS01 rna ? GO:0003735 ... G1TG89 31609474
    527200 6p5k:Y (3.1) BS01 rna ? GO:0003735 ... G1SZ47 31609474

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).