SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    527201 6p5k:Z (3.1) BS01 rna ? GO:0003735 ... G1T3D8 31609474
    527202 6p5k:a (3.1) BS01 rna ? GO:0003735 ... G1TDB3 31609474
    527203 6p5k:a (3.1) BS02 rna ? GO:0003735 ... G1TDB3 31609474
    527204 6p5k:b (3.1) BS01 rna ? GO:0003729 ... G1TFE8 31609474
    527205 6p5k:c (3.1) BS01 rna ? GO:0003735 ... G1TZ76 31609474
    527206 6p5k:d (3.1) BS01 rna ? GO:0000028 ... G1TIB4 31609474
    527207 6p5k:e (3.1) BS01 rna ? GO:0002181 ... G1U7M4 31609474
    527208 6p5k:f (3.1) BS01 rna ? GO:0003735 ... G1T8A2 31609474
    527209 6p5k:g (3.1) BS01 rna ? GO:0003735 ... G1SK22 31609474
    527210 6p5k:h (3.1) BS01 rna ? GO:0001891 ... G1SJB4 31609474
    527211 6p5l:A (3.296) BS01 peptide 3.4.19.12 N/A Q93009 31866294
    527212 6p5m:A (2.65) BS01 O1S 2.7.11.1 GO:0004672 ... O75116 31895562
    527213 6p5m:B (2.65) BS01 O1S 2.7.11.1 GO:0004672 ... O75116 31895562
    527214 6p5n:AA (3.2) BS01 rna ? GO:0002181 ... G1TT27 31609474
    527215 6p5n:AA (3.2) BS02 rna ? GO:0002181 ... G1TT27 31609474
    527216 6p5n:AB (3.2) BS01 rna ? GO:0003723 ... G1TL06 31609474
    527217 6p5n:AC (3.2) BS01 rna ? GO:0003735 ... G1SVW5 31609474
    527218 6p5n:AC (3.2) BS02 rna ? GO:0003735 ... G1SVW5 31609474
    527219 6p5n:AD (3.2) BS01 rna ? GO:0000027 ... P19949 31609474
    527220 6p5n:AD (3.2) BS02 rna ? GO:0000027 ... P19949 31609474
    527221 6p5n:AE (3.2) BS01 rna ? GO:0000027 ... G1SKF7 31609474
    527222 6p5n:AF (3.2) BS01 rna ? GO:0000463 ... G1SV32 31609474
    527223 6p5n:AF (3.2) BS02 rna ? GO:0000463 ... G1SV32 31609474
    527224 6p5n:AG (3.2) BS01 rna ? GO:0003723 ... G1STW0 31609474
    527225 6p5n:AG (3.2) BS02 rna ? GO:0003723 ... G1STW0 31609474
    527226 6p5n:AH (3.2) BS01 rna ? GO:0002181 ... G1SWI6 31609474
    527227 6p5n:AI (3.2) BS01 rna ? GO:0003735 ... B7NZQ2 31609474
    527228 6p5n:AI (3.2) BS02 rna ? GO:0003735 ... B7NZQ2 31609474
    527229 6p5n:AJ (3.2) BS01 rna ? GO:0003735 ... G1TUB8 31609474
    527230 6p5n:AJ (3.2) BS02 rna ? GO:0003735 ... G1TUB8 31609474
    527231 6p5n:AK (3.2) BS01 rna ? GO:0003723 ... G1SKZ8 31609474
    527232 6p5n:AK (3.2) BS02 rna ? GO:0003723 ... G1SKZ8 31609474
    527233 6p5n:AL (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527234 6p5n:AL (3.2) BS02 rna N/A GO:0003735 ... N/A 31609474
    527235 6p5n:AM (3.2) BS01 rna ? GO:0003723 ... G1SZ12 31609474
    527236 6p5n:AN (3.2) BS01 rna ? GO:0002181 ... G1T0C1 31609474
    527237 6p5n:AN (3.2) BS02 rna ? GO:0002181 ... G1T0C1 31609474
    527238 6p5n:AO (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527239 6p5n:AP (3.2) BS01 rna ? GO:0002181 ... G1SCJ6 31609474
    527240 6p5n:AP (3.2) BS02 rna ? GO:0002181 ... G1SCJ6 31609474
    527241 6p5n:AQ (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527242 6p5n:AR (3.2) BS01 rna ? GO:0003723 ... G1TJR3 31609474
    527243 6p5n:AR (3.2) BS02 rna ? GO:0003723 ... G1TJR3 31609474
    527244 6p5n:AS (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527245 6p5n:AS (3.2) BS02 rna N/A GO:0003735 ... N/A 31609474
    527246 6p5n:AT (3.2) BS01 rna ? GO:0003735 ... G1SHQ2 31609474
    527247 6p5n:AT (3.2) BS02 rna ? GO:0003735 ... G1SHQ2 31609474
    527248 6p5n:AU (3.2) BS01 rna ? GO:0002181 ... G1TSG1 31609474
    527249 6p5n:AV (3.2) BS01 rna ? GO:0003735 ... G1T6D1 31609474
    527250 6p5n:AW (3.2) BS01 rna ? GO:0000027 ... G1SE28 31609474
    527251 6p5n:AX (3.2) BS01 rna ? GO:0003735 ... G1SE76 31609474
    527252 6p5n:AX (3.2) BS02 rna ? GO:0003735 ... G1SE76 31609474
    527253 6p5n:AY (3.2) BS01 rna ? GO:0003723 ... G1SQH0 31609474
    527254 6p5n:AY (3.2) BS02 rna ? GO:0003723 ... G1SQH0 31609474
    527255 6p5n:AZ (3.2) BS01 rna ? GO:0003735 ... G1TXF6 31609474
    527256 6p5n:Aa (3.2) BS01 rna ? GO:0003735 ... G1SNY0 31609474
    527257 6p5n:Ab (3.2) BS01 rna ? GO:0002181 ... G1SGR6 31609474
    527258 6p5n:Ac (3.2) BS01 rna ? GO:0002181 ... G1TDL2 31609474
    527259 6p5n:Ad (3.2) BS01 rna ? GO:0002181 ... G1SHG0 31609474
    527260 6p5n:Ae (3.2) BS01 rna ? GO:0003735 ... G1TUN8 31609474
    527261 6p5n:Af (3.2) BS01 rna ? GO:0000049 ... G1SF08 31609474
    527262 6p5n:Ag (3.2) BS01 rna ? GO:0003735 ... G1TXG5 31609474
    527263 6p5n:Ah (3.2) BS01 rna ? GO:0000463 ... G1SIT5 31609474
    527264 6p5n:Ah (3.2) BS02 rna ? GO:0000463 ... G1SIT5 31609474
    527265 6p5n:Ai (3.2) BS01 rna ? GO:0003735 ... G1TTQ5 31609474
    527266 6p5n:Aj (3.2) BS01 rna ? GO:0003723 ... U3KPD5 31609474
    527267 6p5n:Aj (3.2) BS02 rna ? GO:0003723 ... U3KPD5 31609474
    527268 6p5n:Ak (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527269 6p5n:Al (3.2) BS01 rna ? GO:0003735 ... G1TTN1 31609474
    527270 6p5n:Al (3.2) BS02 rna ? GO:0003735 ... G1TTN1 31609474
    527271 6p5n:Am (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527272 6p5n:Ao (3.2) BS01 rna ? GO:0003735 ... G1T040 31609474
    527273 6p5n:Ap (3.2) BS01 rna ? GO:0003735 ... G1SY53 31609474
    527274 6p5n:Aq (3.2) BS01 rna N/A GO:0003747 ... N/A 31609474
    527275 6p5n:Aq (3.2) BS02 rna N/A GO:0003747 ... N/A 31609474
    527276 6p5n:Aq (3.2) BS03 rna N/A GO:0003747 ... N/A 31609474
    527277 6p5n:Ar (3.2) BS01 rna ? GO:0003735 ... G1U7L1 31609474
    527278 6p5n:B (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527279 6p5n:C (3.2) BS01 rna ? GO:0003735 ... G1SS70 31609474
    527280 6p5n:D (3.2) BS01 rna N/A GO:0003723 ... N/A 31609474
    527281 6p5n:E (3.2) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 31609474
    527282 6p5n:F (3.2) BS01 rna ? GO:0003723 ... G1TK17 31609474
    527283 6p5n:G (3.2) BS01 rna ? GO:0003723 ... G1TFM5 31609474
    527284 6p5n:H (3.2) BS01 rna ? GO:0003735 ... G1TM55 31609474
    527285 6p5n:I (3.2) BS01 rna ? GO:0003735 ... G1SVB0 31609474
    527286 6p5n:J (3.2) BS01 rna N/A GO:0003735 ... N/A 31609474
    527287 6p5n:J (3.2) BS02 rna N/A GO:0003735 ... N/A 31609474
    527288 6p5n:K (3.2) BS01 rna ? GO:0003723 ... B7NZS8 31609474
    527289 6p5n:L (3.2) BS01 rna ? GO:0003723 ... G1TPV3 31609474
    527290 6p5n:M (3.2) BS01 rna ? GO:0003735 ... G1TRM4 31609474
    527291 6p5n:N (3.2) BS01 rna ? GO:0003735 ... G1SFR8 31609474
    527292 6p5n:O (3.2) BS01 rna ? GO:0003735 ... G1SP51 31609474
    527293 6p5n:O (3.2) BS02 rna ? GO:0003735 ... G1SP51 31609474
    527294 6p5n:P (3.2) BS01 rna ? GO:0003735 ... G1T1F0 31609474
    527295 6p5n:Q (3.2) BS01 rna ? GO:0000028 ... G1U0Q2 31609474
    527296 6p5n:R (3.2) BS01 rna ? GO:0000462 ... G1SGX4 31609474
    527297 6p5n:S (3.2) BS01 rna ? GO:0003735 ... G1TU13 31609474
    527298 6p5n:T (3.2) BS01 rna ? GO:0003676 ... G1TPG3 31609474
    527299 6p5n:U (3.2) BS01 rna ? GO:0000028 ... G1TN62 31609474
    527300 6p5n:V (3.2) BS01 rna ? GO:0003723 ... G1SIZ2 31609474
    527301 6p5n:X (3.2) BS01 rna ? GO:0003735 ... G1TG89 31609474
    527302 6p5n:Y (3.2) BS01 rna ? GO:0003735 ... G1SZ47 31609474
    527303 6p5n:Z (3.2) BS01 rna ? GO:0003735 ... G1T3D8 31609474
    527304 6p5n:a (3.2) BS01 rna ? GO:0003735 ... G1TDB3 31609474
    527305 6p5n:b (3.2) BS01 rna ? GO:0003729 ... G1TFE8 31609474
    527306 6p5n:c (3.2) BS01 rna ? GO:0003735 ... G1TZ76 31609474
    527307 6p5n:d (3.2) BS01 rna ? GO:0000028 ... G1TIB4 31609474
    527308 6p5n:e (3.2) BS01 rna ? GO:0002181 ... G1U7M4 31609474
    527309 6p5n:f (3.2) BS01 rna ? GO:0003735 ... G1T8A2 31609474
    527310 6p5n:g (3.2) BS01 rna ? GO:0003735 ... G1SK22 31609474
    527311 6p5n:h (3.2) BS01 rna ? GO:0001891 ... G1SJB4 31609474
    527312 6p5o:A (1.49) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 31461616
    527313 6p5o:A (1.49) BS02 O2Y 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 31461616 MOAD: ic50=97uM
    527314 6p5p:A (3.3) BS01 O1V 2.7.11.1 GO:0004672 ... O75116 31895562
    527315 6p5p:B (3.3) BS01 O1V 2.7.11.1 GO:0004672 ... O75116 31895562
    527316 6p5p:C (3.3) BS01 O1V 2.7.11.1 GO:0004672 ... O75116 31895562
    527317 6p5p:D (3.3) BS01 O1V 2.7.11.1 GO:0004672 ... O75116 31895562
    527318 6p5q:A (1.86) BS01 FE ? GO:0046872 ... Q4K8M0 31487162
    527319 6p5q:A (1.86) BS02 FE ? GO:0046872 ... Q4K8M0 31487162
    527320 6p5q:B (1.86) BS01 FE ? GO:0046872 ... Q4K8M0 31487162
    527321 6p5q:B (1.86) BS02 FE ? GO:0046872 ... Q4K8M0 31487162
    527322 6p5r:A (2.45) BS01 GDP ? N/A B6SBM0 31704716
    527323 6p5s:A (2.194) BS01 3NG 2.7.11.1 GO:0004672 ... Q9H2X6 31341017
    527324 6p5u:A (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527325 6p5u:B (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527326 6p5u:C (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527327 6p5u:D (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527328 6p5u:E (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527329 6p5u:F (2.1) BS01 COA ? GO:0003824 ... A0A2P1BT02 31841665
    527330 6p5v:A (1.398) BS01 O37 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    31465221 MOAD: ic50=0.2uM
    527331 6p5w:A (1.69) BS01 O0A 3.2.1.17 GO:0003796 ... D9IEF7
    Q96GG9
    31465221 MOAD: ic50=5.1uM
    527332 6p5x:A (1.97) BS01 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527333 6p5x:A (1.97) BS02 SHN 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527334 6p5x:B (1.97) BS01 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527335 6p5x:B (1.97) BS02 SHN 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527336 6p5z:A (2.26) BS01 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527337 6p5z:A (2.26) BS02 F0X 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527338 6p5z:A (2.26) BS03 F0X 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527339 6p5z:B (2.26) BS01 F0X 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527340 6p5z:B (2.26) BS02 SAH 1.3.1.76
    2.1.1.107
    4.99.1.4
    GO:0004325 ... P25924 32054833
    527341 6p60:A (2.498) BS01 peptide N/A N/A N/A N/A
    527342 6p60:B (2.498) BS01 peptide N/A N/A N/A N/A
    527343 6p60:C (2.498) BS01 peptide N/A N/A N/A N/A
    527344 6p60:C (2.498) BS02 peptide N/A N/A N/A N/A
    527345 6p60:D (2.498) BS01 peptide N/A N/A N/A N/A
    527346 6p60:G (2.498) BS01 peptide N/A N/A N/A N/A
    527347 6p60:H (2.498) BS01 peptide N/A N/A N/A N/A
    527348 6p60:J (2.498) BS01 peptide N/A N/A N/A N/A
    527349 6p60:J (2.498) BS02 peptide N/A N/A N/A N/A
    527350 6p60:K (2.498) BS01 peptide N/A N/A N/A N/A
    527351 6p62:C (3.57) BS01 MAN N/A N/A N/A 31732167
    527352 6p62:C (3.57) BS02 MAN N/A N/A N/A 31732167
    527353 6p62:F (3.57) BS01 MAN N/A N/A N/A 31732167
    527354 6p62:F (3.57) BS02 MAN N/A N/A N/A 31732167
    527355 6p62:H (3.57) BS01 MAN N/A N/A N/A 31732167
    527356 6p62:H (3.57) BS02 MAN N/A N/A N/A 31732167
    527357 6p63:A (2.4) BS01 AMP ? GO:0005524 ... Q9L069 32885650
    527358 6p63:A (2.4) BS02 MG ? GO:0005524 ... Q9L069 32885650
    527359 6p63:B (2.4) BS01 AMP ? GO:0005524 ... Q9L069 32885650
    527360 6p63:B (2.4) BS02 MG ? GO:0005524 ... Q9L069 32885650
    527361 6p63:C (2.4) BS01 AMP ? GO:0005524 ... Q9L069 32885650
    527362 6p63:C (2.4) BS02 MG ? GO:0005524 ... Q9L069 32885650
    527363 6p63:D (2.4) BS01 AMP ? GO:0005524 ... Q9L069 32885650
    527364 6p63:D (2.4) BS02 MG ? GO:0005524 ... Q9L069 32885650
    527365 6p64:A (3.05) BS01 peptide ? N/A Q53Z42 N/A
    527366 6p64:F (3.05) BS01 peptide ? N/A Q53Z42 N/A
    527367 6p68:A (2.9) BS01 O1Y 2.7.10.1 GO:0004672 ... P11362 N/A
    527368 6p68:B (2.9) BS01 O1Y 2.7.10.1 GO:0004672 ... P11362 N/A
    527369 6p68:C (2.9) BS01 O1Y 2.7.10.1 GO:0004672 ... P11362 N/A
    527370 6p69:A (2.2) BS01 O21 2.7.10.1 GO:0004672 ... P11362 N/A BindingDB: IC50=1020nM
    527371 6p69:B (2.2) BS01 O21 2.7.10.1 GO:0004672 ... P11362 N/A BindingDB: IC50=1020nM
    527372 6p6a:B (2.151) BS01 peptide ? GO:0005737 ... P52293 31996719
    527373 6p6a:B (2.151) BS02 peptide ? GO:0005737 ... P52293 31996719
    527374 6p6d:A (2.31) BS01 BMA ? N/A P0DOX5 31640157
    527375 6p6d:B (2.31) BS01 BMA ? N/A P0DOX5 31640157
    527376 6p6d:B (2.31) BS02 CYS ? N/A P0DOX5 31640157
    527377 6p6e:A (1.99) BS01 peptide ? GO:0005737 ... P52293 31996719
    527378 6p6e:A (1.99) BS02 peptide ? GO:0005737 ... P52293 31996719
    527379 6p6g:A (1.59) BS01 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527380 6p6g:A (1.59) BS02 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527381 6p6g:A (1.59) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527382 6p6g:A (1.59) BS04 SAH 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527383 6p6g:A (1.59) BS05 LUP 2.1.1.354 GO:0000978 ... Q9H7B4 32071679 MOAD: Ki=6nM
    BindingDB: EC50=39nM, IC50=67nM, Ki=6.0nM
    527384 6p6j:A (3.4) BS01 O34 ? GO:0005524 ... Q1RAG2 32076651
    527385 6p6k:A (1.55) BS01 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527386 6p6k:A (1.55) BS02 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527387 6p6k:A (1.55) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527388 6p6k:A (1.55) BS04 SAM 2.1.1.354 GO:0000978 ... Q9H7B4 32071679
    527389 6p6k:A (1.55) BS05 L0J 2.1.1.354 GO:0000978 ... Q9H7B4 32071679 BindingDB: IC50=1421nM
    527390 6p6l:A (1.728) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527391 6p6l:A (1.728) BS02 O31 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527392 6p6m:A (2.201) BS01 O31 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527393 6p6m:A (2.201) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527394 6p6o:A (2.002) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527395 6p6o:A (2.002) BS02 O31 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527396 6p6q:A (3.5) BS01 SUE 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527397 6p6q:A (3.5) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527398 6p6q:B (3.5) BS01 SUE 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527399 6p6q:B (3.5) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A
    527400 6p6r:A (1.749) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).