SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    528001 6pbs:I (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528002 6pbs:K (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528003 6pbs:K (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528004 6pbs:M (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528005 6pbs:M (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528006 6pbs:O (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528007 6pbs:O (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528008 6pbs:T (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528009 6pbs:T (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528010 6pbs:W (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528011 6pbs:W (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528012 6pbs:W (2.5) BS03 peptide ? N/A P9WPC9 32355042
    528013 6pbs:Y (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528014 6pbs:Y (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528015 6pbs:e (2.5) BS01 peptide ? N/A P9WPC9 32355042
    528016 6pbs:e (2.5) BS02 peptide ? N/A P9WPC9 32355042
    528017 6pbt:A (2.18) BS01 NAP 1.5.1.- GO:0005886 ... Q9HUX5 31615895
    528018 6pbt:A (2.18) BS02 O77 1.5.1.- GO:0005886 ... Q9HUX5 31615895
    528019 6pbt:B (2.18) BS01 NAP 1.5.1.- GO:0005886 ... Q9HUX5 31615895
    528020 6pbv:A (1.566) BS01 peptide N/A N/A N/A 32150583
    528021 6pbv:B (1.566) BS01 peptide N/A N/A N/A 32150583
    528022 6pbv:C (1.566) BS01 peptide N/A N/A N/A 32150583
    528023 6pbv:D (1.566) BS01 peptide N/A N/A N/A 32150583
    528024 6pbw:C (2.058) BS01 peptide N/A N/A N/A 32150583
    528025 6pbw:D (2.058) BS01 peptide N/A N/A N/A 32150583
    528026 6pc1:A (2.76) BS01 G4P ? GO:0016462 ... B5ZA44 31679177
    528027 6pc1:A (2.76) BS02 PO4 ? GO:0016462 ... B5ZA44 31679177
    528028 6pc1:A (2.76) BS03 G4P ? GO:0016462 ... B5ZA44 31679177
    528029 6pc1:B (2.76) BS01 G4P ? GO:0016462 ... B5ZA44 31679177
    528030 6pc1:B (2.76) BS02 G4P ? GO:0016462 ... B5ZA44 31679177
    528031 6pc1:B (2.76) BS03 PO4 ? GO:0016462 ... B5ZA44 31679177
    528032 6pc1:C (2.76) BS01 G4P ? GO:0016462 ... B5ZA44 31679177
    528033 6pc1:C (2.76) BS02 PO4 ? GO:0016462 ... B5ZA44 31679177
    528034 6pc1:C (2.76) BS03 G4P ? GO:0016462 ... B5ZA44 31679177
    528035 6pc1:D (2.76) BS01 G4P ? GO:0016462 ... B5ZA44 31679177
    528036 6pc1:D (2.76) BS02 G4P ? GO:0016462 ... B5ZA44 31679177
    528037 6pc1:D (2.76) BS03 PO4 ? GO:0016462 ... B5ZA44 31679177
    528038 6pc2:A (2.9) BS01 PO4 ? GO:0016462 ... B5ZA44 31679177
    528039 6pc2:A (2.9) BS02 PO4 ? GO:0016462 ... B5ZA44 31679177
    528040 6pc2:A (2.9) BS03 GNP ? GO:0016462 ... B5ZA44 31679177
    528041 6pc2:A (2.9) BS04 GNP ? GO:0016462 ... B5ZA44 31679177
    528042 6pc2:B (2.9) BS01 GNP ? GO:0016462 ... B5ZA44 31679177
    528043 6pc2:B (2.9) BS02 GNP ? GO:0016462 ... B5ZA44 31679177
    528044 6pc2:B (2.9) BS03 PO4 ? GO:0016462 ... B5ZA44 31679177
    528045 6pc2:B (2.9) BS04 PO4 ? GO:0016462 ... B5ZA44 31679177
    528046 6pc3:A (2.1) BS01 GSP ? GO:0016462 ... B5ZA44 31679177
    528047 6pc3:A (2.1) BS02 PO4 ? GO:0016462 ... B5ZA44 31679177
    528048 6pc3:A (2.1) BS03 TS6 ? GO:0016462 ... B5ZA44 31679177
    528049 6pc3:A (2.1) BS04 GSP ? GO:0016462 ... B5ZA44 31679177
    528050 6pc3:B (2.1) BS01 GSP ? GO:0016462 ... B5ZA44 31679177
    528051 6pc3:B (2.1) BS02 GSP ? GO:0016462 ... B5ZA44 31679177
    528052 6pc3:B (2.1) BS03 PO4 ? GO:0016462 ... B5ZA44 31679177
    528053 6pc3:B (2.1) BS04 TS6 ? GO:0016462 ... B5ZA44 31679177
    528054 6pc4:A (2.602) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    528055 6pc4:A (2.602) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    528056 6pc4:B (2.602) BS01 GDP ? GO:0000226 ... P02554 31860298
    528057 6pc4:B (2.602) BS02 O91 ? GO:0000226 ... P02554 31860298
    528058 6pc4:C (2.602) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    528059 6pc4:C (2.602) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    528060 6pc4:D (2.602) BS01 GDP ? GO:0000226 ... P02554 31860298
    528061 6pc4:D (2.602) BS02 O91 ? GO:0000226 ... P02554 31860298
    528062 6pc5:K (2.7) BS01 rna ? GO:0000027 ... P60422 32968273
    528063 6pc5:L (2.7) BS01 rna ? GO:0002181 ... P02413 32968273
    528064 6pc5:M (2.7) BS01 rna ? GO:0001070 ... P60723 32968273
    528065 6pc5:N (2.7) BS01 rna ? GO:0000027 ... P60438 32968273
    528066 6pc5:O (2.7) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528067 6pc6:K (2.5) BS01 rna ? GO:0000027 ... P60422 32968273
    528068 6pc6:L (2.5) BS01 rna ? GO:0002181 ... P02413 32968273
    528069 6pc6:M (2.5) BS01 rna ? GO:0001070 ... P60723 32968273
    528070 6pc6:N (2.5) BS01 rna ? GO:0000027 ... P60438 32968273
    528071 6pc6:O (2.5) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528072 6pc7:K (2.5) BS01 rna ? GO:0000027 ... P60422 32968273
    528073 6pc7:L (2.5) BS01 rna ? GO:0002181 ... P02413 32968273
    528074 6pc7:M (2.5) BS01 rna ? GO:0001070 ... P60723 32968273
    528075 6pc7:N (2.5) BS01 rna ? GO:0000027 ... P60438 32968273
    528076 6pc7:O (2.5) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528077 6pc8:K (2.9) BS01 rna ? GO:0000027 ... P60422 32968273
    528078 6pc8:L (2.9) BS01 rna ? GO:0002181 ... P02413 32968273
    528079 6pc8:M (2.9) BS01 rna ? GO:0001070 ... P60723 32968273
    528080 6pc8:N (2.9) BS01 rna ? GO:0000027 ... P60438 32968273
    528081 6pc8:O (2.9) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528082 6pc9:A (2.3) BS01 O7P ? GO:0003756 ... P0AEG4 32529824 MOAD: Kd=480uM
    BindingDB: Kd=480000nM
    528083 6pcb:A (1.61) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528084 6pcb:B (1.61) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528085 6pcb:C (1.61) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528086 6pcb:D (1.61) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528087 6pcc:A (1.96) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528088 6pcc:A (1.96) BS02 O8Y 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528089 6pcc:B (1.96) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528090 6pcc:B (1.96) BS02 O8Y 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528091 6pcc:C (1.96) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528092 6pcc:C (1.96) BS02 O8Y 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528093 6pcc:D (1.96) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528094 6pcc:D (1.96) BS02 O8Y 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528095 6pcd:A (1.37) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528096 6pcd:A (1.37) BS02 OYA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528097 6pcd:B (1.37) BS01 OYA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528098 6pcd:D (1.37) BS01 COA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528099 6pcd:D (1.37) BS02 OYA 2.3.1.174 GO:0003988 ... Q88N39 32647822
    528100 6pch:K (2.9) BS01 rna ? GO:0000027 ... P60422 32968273
    528101 6pch:L (2.9) BS01 rna ? GO:0002181 ... P02413 32968273
    528102 6pch:M (2.9) BS01 rna ? GO:0001070 ... P60723 32968273
    528103 6pch:N (2.9) BS01 rna ? GO:0000027 ... P60438 32968273
    528104 6pch:O (2.9) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528105 6pck:A (1.2) BS01 O81 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 32303658
    528106 6pck:A (1.2) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 32303658
    528107 6pcl:A (1.3) BS01 I7P 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 32303658
    528108 6pcl:A (1.3) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 32303658
    528109 6pcl:A (1.3) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 32303658
    528110 6pcm:A (3.107) BS01 dna 5.6.2.1 GO:0003677 ... A0R5D9 32232337
    528111 6pcm:A (3.107) BS02 dna 5.6.2.1 GO:0003677 ... A0R5D9 32232337
    528112 6pcm:B (3.107) BS01 dna 5.6.2.1 GO:0003677 ... A0R5D9 32232337
    528113 6pcm:B (3.107) BS02 dna 5.6.2.1 GO:0003677 ... A0R5D9 32232337
    528114 6pcp:A (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528115 6pcp:A (3.2) BS02 OA7 N/A GO:0003700 ... N/A 31697703
    528116 6pcp:B (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528117 6pcp:B (3.2) BS02 OA7 N/A GO:0003700 ... N/A 31697703
    528118 6pcp:C (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528119 6pcp:C (3.2) BS02 OA7 N/A GO:0003700 ... N/A 31697703
    528120 6pcp:D (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528121 6pcp:E (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528122 6pcp:F (3.2) BS01 OA7 N/A GO:0003700 ... N/A 31697703
    528123 6pcp:F (3.2) BS02 OA7 N/A GO:0003700 ... N/A 31697703
    528124 6pcq:K (2.6) BS01 rna ? GO:0000027 ... P60422 32968273
    528125 6pcq:L (2.6) BS01 rna ? GO:0002181 ... P02413 32968273
    528126 6pcq:M (2.6) BS01 rna ? GO:0001070 ... P60723 32968273
    528127 6pcq:N (2.6) BS01 rna ? GO:0000027 ... P60438 32968273
    528128 6pcq:O (2.6) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528129 6pcr:K (2.5) BS01 rna ? GO:0000027 ... P60422 32968273
    528130 6pcr:L (2.5) BS01 rna ? GO:0002181 ... P02413 32968273
    528131 6pcr:M (2.5) BS01 rna ? GO:0001070 ... P60723 32968273
    528132 6pcr:N (2.5) BS01 rna ? GO:0000027 ... P60438 32968273
    528133 6pcr:O (2.5) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528134 6pcs:K (2.8) BS01 rna ? GO:0000027 ... P60422 32968273
    528135 6pcs:L (2.8) BS01 rna ? GO:0002181 ... P02413 32968273
    528136 6pcs:M (2.8) BS01 rna ? GO:0001070 ... P60723 32968273
    528137 6pcs:N (2.8) BS01 rna ? GO:0000027 ... P60438 32968273
    528138 6pcs:O (2.8) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528139 6pct:K (2.8) BS01 rna ? GO:0000027 ... P60422 32968273
    528140 6pct:L (2.8) BS01 rna ? GO:0002181 ... P02413 32968273
    528141 6pct:M (2.8) BS01 rna ? GO:0001070 ... P60723 32968273
    528142 6pct:N (2.8) BS01 rna ? GO:0000027 ... P60438 32968273
    528143 6pct:O (2.8) BS01 rna ? GO:0002181 ... P0AA10 32968273
    528144 6pcw:A (2.2) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    528145 6pcw:A (2.2) BS02 O97 2.7.11.1 GO:0004672 ... P11309 N/A
    528146 6pcy:A (1.9) BS01 CU ? GO:0005507 ... P00299 3560221
    528147 6pcz:A (1.44) BS01 ZN ? N/A P37659 32152228
    528148 6pcz:A (1.44) BS02 MG ? N/A P37659 32152228
    528149 6pcz:B (1.44) BS01 ZN ? N/A P37659 32152228
    528150 6pd0:A (1.75) BS01 MG ? N/A P37659 32152228
    528151 6pd0:A (1.75) BS02 ZN ? N/A P37659 32152228
    528152 6pd0:B (1.75) BS01 MG ? N/A P37659 32152228
    528153 6pd1:A (2.72) BS01 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528154 6pd1:B (2.72) BS01 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528155 6pd1:D (2.72) BS01 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528156 6pd2:A (1.95) BS01 PLP 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528157 6pd2:A (1.95) BS02 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528158 6pd2:A (1.95) BS03 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528159 6pd2:A (1.95) BS04 0RC 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528160 6pd2:B (1.95) BS01 PLP 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528161 6pd2:B (1.95) BS02 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528162 6pd2:B (1.95) BS03 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528163 6pd2:B (1.95) BS04 0RC 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528164 6pd2:C (1.95) BS01 PLP 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528165 6pd2:C (1.95) BS02 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528166 6pd2:C (1.95) BS03 0RC 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528167 6pd2:C (1.95) BS04 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528168 6pd2:D (1.95) BS01 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528169 6pd2:D (1.95) BS02 PLP 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528170 6pd2:D (1.95) BS03 MG 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528171 6pd2:D (1.95) BS04 0RC 2.6.1.37
    2.7.7.107
    GO:0008483 ... Q73MU2 31420548
    528172 6pd7:A (1.92) BS01 OAJ ? GO:0003756 ... P0AEG4 32529824 MOAD: Kd=290uM
    BindingDB: Kd=290000nM
    528173 6pd8:A (2.738) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528174 6pd8:A (2.738) BS02 O9D 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528175 6pd9:A (2.8) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528176 6pd9:A (2.8) BS02 O9G 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528177 6pda:A (2.448) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528178 6pda:A (2.448) BS02 O9J 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528179 6pdb:A (2.42) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528180 6pdb:A (2.42) BS02 O9M 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528181 6pdc:A (1.96) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528182 6pdc:A (1.96) BS02 O9P 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528183 6pdd:A (2.15) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528184 6pdd:A (2.15) BS02 O9S 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528185 6pde:A (2.22) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528186 6pde:A (2.22) BS02 O9V 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528187 6pdf:A (2.22) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528188 6pdf:A (2.22) BS02 O9Y 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528189 6pdg:A (1.919) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528190 6pdg:A (1.919) BS02 O9A 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q9H7Z6 32118427
    528191 6pdh:A (1.96) BS01 OAV ? GO:0003756 ... P0AEG4 32529824 MOAD: Kd=62uM
    BindingDB: Kd=62000nM
    528192 6pdi:A (1.85) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    528193 6pdi:A (1.85) BS02 OCJ 2.7.11.1 GO:0004672 ... P11309 N/A
    528194 6pdj:A (1.81) BS01 ODJ 2.7.10.2 GO:0004672 ... P06239 31620238 BindingDB: IC50=42nM
    528195 6pdl:C (2.7) BS01 FUC ? GO:0019031 ... O89343 23144952
    528196 6pdl:E (2.7) BS01 FUC ? GO:0019031 ... O89343 23144952
    528197 6pdn:A (2.4) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    528198 6pdn:A (2.4) BS02 OD4 2.7.11.1 GO:0004672 ... P11309 N/A
    528199 6pdo:A (2.4) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    528200 6pdo:A (2.4) BS02 OD1 2.7.11.1 GO:0004672 ... P11309 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).