SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    533001 6q1v:A (1.85) BS02 dna 6.5.1.1 GO:0003677 ... P18858 31780661
    533002 6q1v:A (1.85) BS03 dna 6.5.1.1 GO:0003677 ... P18858 31780661
    533003 6q1v:A (1.85) BS04 AMP 6.5.1.1 GO:0003677 ... P18858 31780661
    533004 6q1y:A (1.65) BS01 NAD 1.3.1.9 GO:0000166 ... A0A0H2ZSV5 N/A
    533005 6q1z:A (3.446) BS01 CA 3.2.1.18 GO:0004308 ... A0A5A4LHS4 31649200
    533006 6q1z:B (3.446) BS01 CA 3.2.1.18 GO:0004308 ... A0A5A4LHS4 31649200
    533007 6q20:A (2.45) BS01 CA 3.2.1.18 GO:0004308 ... Q1K9Q1 31649200
    533008 6q21:A (1.95) BS01 MG 3.6.5.2 GO:0000139 ... P01112 2406906
    533009 6q21:B (1.95) BS01 MG 3.6.5.2 GO:0000139 ... P01112 2406906
    533010 6q21:C (1.95) BS01 MG 3.6.5.2 GO:0000139 ... P01112 2406906
    533011 6q23:A (3.27) BS01 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533012 6q23:A (3.27) BS02 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533013 6q23:B (3.27) BS01 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533014 6q23:B (3.27) BS02 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533015 6q23:C (3.27) BS01 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533016 6q23:C (3.27) BS02 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533017 6q23:D (3.27) BS01 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533018 6q23:D (3.27) BS02 CA 3.2.1.18 GO:0004308 ... C3W5S3 31649200
    533019 6q29:A (1.702) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 33962016
    533020 6q29:A (1.702) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 33962016
    533021 6q2a:A (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533022 6q2a:B (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533023 6q2a:C (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533024 6q2a:D (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533025 6q2a:E (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533026 6q2a:F (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533027 6q2a:G (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533028 6q2a:H (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533029 6q2a:I (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533030 6q2a:J (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533031 6q2a:K (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533032 6q2a:L (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533033 6q2a:M (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533034 6q2a:N (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533035 6q2a:O (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533036 6q2a:P (2.6) BS01 5XH 2.7.1.- GO:0004672 ... Q382U0 32661312
    533037 6q2b:A (2.72) BS01 dna ? GO:0003700 ... Q8Y8S9 N/A
    533038 6q2b:A (2.72) BS02 dna ? GO:0003700 ... Q8Y8S9 N/A
    533039 6q2b:B (2.72) BS01 dna ? GO:0003700 ... Q8Y8S9 N/A
    533040 6q2b:B (2.72) BS02 dna ? GO:0003700 ... Q8Y8S9 N/A
    533041 6q2c:A (1.8) BS01 HEM ? GO:0004497 ... L8GJB3 33008918
    533042 6q2c:B (1.8) BS01 HEM ? GO:0004497 ... L8GJB3 33008918
    533043 6q2d:A (3.45) BS01 SF4 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533044 6q2d:B (3.45) BS01 SF4 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533045 6q2e:A (1.768) BS01 MTA 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533046 6q2e:A (1.768) BS02 SF4 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533047 6q2e:B (1.768) BS01 MTA 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533048 6q2e:B (1.768) BS02 SF4 2.5.1.108 GO:0016740 ... A5UMY5 31566354
    533049 6q2j:E (4.1) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533050 6q2j:E (4.1) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533051 6q2j:E (4.1) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533052 6q2j:E (4.1) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533053 6q2j:F (4.1) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533054 6q2j:F (4.1) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533055 6q2j:F (4.1) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533056 6q2j:F (4.1) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533057 6q2k:A (2.0) BS01 CA ? N/A P16952 N/A
    533058 6q2l:A (1.8) BS01 MG ? N/A P16952 N/A
    533059 6q2m:A (2.75) BS01 DYD 1.13.12.7 GO:0004497 ... P08659 31560532
    533060 6q2m:A (2.75) BS02 DYD 1.13.12.7 GO:0004497 ... P08659 31560532
    533061 6q2m:A (2.75) BS03 SLU 1.13.12.7 GO:0004497 ... P08659 31560532
    533062 6q2m:B (2.75) BS01 SLU 1.13.12.7 GO:0004497 ... P08659 31560532
    533063 6q2m:C (2.75) BS01 SLU 1.13.12.7 GO:0004497 ... P08659 31560532
    533064 6q2n:E (4.4) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533065 6q2n:E (4.4) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533066 6q2n:E (4.4) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533067 6q2n:E (4.4) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533068 6q2n:F (4.4) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533069 6q2n:F (4.4) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533070 6q2n:F (4.4) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533071 6q2n:F (4.4) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533072 6q2o:E (3.65) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533073 6q2o:E (3.65) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533074 6q2o:E (3.65) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533075 6q2o:E (3.65) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533076 6q2o:F (3.65) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533077 6q2o:F (3.65) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533078 6q2o:F (3.65) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533079 6q2o:F (3.65) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533080 6q2p:A (1.452) BS01 SF4 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533081 6q2p:A (1.452) BS02 SAH 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533082 6q2p:A (1.452) BS03 CTP 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533083 6q2p:B (1.452) BS01 SF4 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533084 6q2p:B (1.452) BS02 SAH 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533085 6q2p:B (1.452) BS03 CTP 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533086 6q2q:A (1.892) BS01 SF4 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533087 6q2q:A (1.892) BS02 SAH 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533088 6q2q:A (1.892) BS03 UTP 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533089 6q2q:B (1.892) BS01 SF4 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533090 6q2q:B (1.892) BS02 SAH 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533091 6q2q:B (1.892) BS03 UTP 4.2.-.- GO:0003824 ... Q8CBB9 31917549
    533092 6q2r:E (4.3) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533093 6q2r:E (4.3) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533094 6q2r:E (4.3) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533095 6q2r:E (4.3) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533096 6q2r:F (4.3) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533097 6q2r:F (4.3) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533098 6q2r:F (4.3) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533099 6q2r:F (4.3) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533100 6q2r:Y (4.3) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533101 6q2r:Y (4.3) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533102 6q2r:Y (4.3) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533103 6q2r:Y (4.3) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533104 6q2r:Z (4.3) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533105 6q2r:Z (4.3) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533106 6q2r:Z (4.3) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533107 6q2r:Z (4.3) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533108 6q2s:E (3.8) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533109 6q2s:E (3.8) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533110 6q2s:E (3.8) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533111 6q2s:E (3.8) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533112 6q2s:F (3.8) BS01 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533113 6q2s:F (3.8) BS02 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533114 6q2s:F (3.8) BS03 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533115 6q2s:F (3.8) BS04 CA 2.7.10.1 GO:0005509 ... P07949 31535977
    533116 6q2t:A (2.8) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 31663733
    533117 6q2t:A (2.8) BS02 PJM 1.14.14.154 GO:0004497 ... Q16850 31663733 BindingDB: Kd=90nM, IC50=<500nM
    533118 6q2t:A (2.8) BS03 DXC 1.14.14.154 GO:0004497 ... Q16850 31663733
    533119 6q2t:A (2.8) BS04 DXC 1.14.14.154 GO:0004497 ... Q16850 31663733
    533120 6q2t:B (2.8) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 31663733
    533121 6q2t:B (2.8) BS02 PJM 1.14.14.154 GO:0004497 ... Q16850 31663733 BindingDB: Kd=90nM, IC50=<500nM
    533122 6q2u:A (1.85) BS01 HEC ? GO:0004129 ... P00106 31707335
    533123 6q2u:A (1.85) BS02 HEC ? GO:0004129 ... P00106 31707335
    533124 6q2w:A (1.99) BS01 HBW ? GO:0003677 ... P51449 31101472
    533125 6q2w:B (1.99) BS01 HBW ? GO:0003677 ... P51449 31101472
    533126 6q2y:A (1.0) BS01 ZN 3.5.2.6 N/A C7C422 30996812
    533127 6q2y:A (1.0) BS02 ZN 3.5.2.6 N/A C7C422 30996812
    533128 6q2y:A (1.0) BS03 CA 3.5.2.6 N/A C7C422 30996812
    533129 6q2y:A (1.0) BS04 CA 3.5.2.6 N/A C7C422 30996812
    533130 6q2y:A (1.0) BS05 HCQ 3.5.2.6 N/A C7C422 30996812
    533131 6q2y:B (1.0) BS01 ZN 3.5.2.6 N/A C7C422 30996812
    533132 6q2y:B (1.0) BS02 ZN 3.5.2.6 N/A C7C422 30996812
    533133 6q2y:B (1.0) BS03 CA 3.5.2.6 N/A C7C422 30996812
    533134 6q2y:B (1.0) BS04 CA 3.5.2.6 N/A C7C422 30996812
    533135 6q2y:B (1.0) BS05 HCQ 3.5.2.6 N/A C7C422 30996812
    533136 6q30:A (1.5) BS01 ZN 3.5.2.6 N/A C7C422 30996812
    533137 6q30:A (1.5) BS02 ZN 3.5.2.6 N/A C7C422 30996812
    533138 6q30:A (1.5) BS03 CA 3.5.2.6 N/A C7C422 30996812
    533139 6q30:A (1.5) BS04 CA 3.5.2.6 N/A C7C422 30996812
    533140 6q30:A (1.5) BS05 HCH 3.5.2.6 N/A C7C422 30996812
    533141 6q30:B (1.5) BS01 ZN 3.5.2.6 N/A C7C422 30996812
    533142 6q30:B (1.5) BS02 ZN 3.5.2.6 N/A C7C422 30996812
    533143 6q30:B (1.5) BS03 CA 3.5.2.6 N/A C7C422 30996812
    533144 6q30:B (1.5) BS04 CA 3.5.2.6 N/A C7C422 30996812
    533145 6q30:B (1.5) BS05 HCH 3.5.2.6 N/A C7C422 30996812
    533146 6q31:A (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    533147 6q31:B (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    533148 6q32:A (1.39) BS01 NWS 2.10.1.1
    2.7.7.75
    GO:0032324 ... Q39054 34183818
    533149 6q34:A (1.82) BS01 HEM N/A GO:0004601 ... N/A 31316799
    533150 6q34:B (1.82) BS01 HEM N/A GO:0004601 ... N/A 31316799
    533151 6q35:A (1.4) BS01 HD5 3.5.2.6 GO:0008800 ... Q09HD0 30996812
    533152 6q35:B (1.4) BS01 HD5 3.5.2.6 GO:0008800 ... Q09HD0 30996812
    533153 6q36:A (2.01) BS01 peptide ? N/A Q15561 31235263
    533154 6q36:B (2.01) BS01 peptide ? N/A Q15561 31235263
    533155 6q37:A (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533156 6q37:A (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533157 6q37:A (2.211) BS03 HE8 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=440nM
    533158 6q37:B (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533159 6q37:B (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533160 6q37:B (2.211) BS03 HE8 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=440nM
    533161 6q37:C (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533162 6q37:C (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533163 6q37:C (2.211) BS03 HE8 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=440nM
    533164 6q38:A (1.74) BS01 peptide 2.7.11.1 GO:0004672 ... P68400 31183056
    533165 6q39:A (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533166 6q39:A (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533167 6q39:A (2.213) BS03 HDQ 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=16nM
    533168 6q39:B (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533169 6q39:B (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533170 6q39:B (2.213) BS03 HDQ 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=16nM
    533171 6q39:C (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533172 6q39:C (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    533173 6q39:C (2.213) BS03 HDQ 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=16nM
    533174 6q3b:A (1.11) BS01 PYZ 2.7.11.22 GO:0000082 ... P24941 30860382
    533175 6q3b:A (1.11) BS02 PYZ 2.7.11.22 GO:0000082 ... P24941 30860382
    533176 6q3c:A (1.29) BS01 BYZ 2.7.11.22 GO:0000082 ... P24941 30860382
    533177 6q3c:A (1.29) BS02 BYZ 2.7.11.22 GO:0000082 ... P24941 30860382
    533178 6q3d:A (1.93) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    533179 6q3d:B (1.93) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    533180 6q3e:A (2.03) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    533181 6q3e:B (2.03) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    533182 6q3f:A (1.18) BS01 HEW 2.7.11.22 GO:0000082 ... P24941 30860382
    533183 6q3g:A1 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533184 6q3g:A3 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533185 6q3g:A4 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533186 6q3g:A6 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533187 6q3g:A7 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533188 6q3g:A8 (3.8) BS01 peptide ? N/A Q859I3 31663016
    533189 6q3g:AG (3.8) BS01 peptide ? N/A Q859I3 31663016
    533190 6q3g:AL (3.8) BS01 peptide ? N/A Q859I3 31663016
    533191 6q3g:AQ (3.8) BS01 peptide ? N/A Q859I3 31663016
    533192 6q3g:AR (3.8) BS01 peptide ? N/A Q859I3 31663016
    533193 6q3g:AS (3.8) BS01 peptide ? N/A Q859I3 31663016
    533194 6q3g:BD (3.8) BS01 peptide ? N/A Q859I3 31663016
    533195 6q3g:BE (3.8) BS01 peptide ? N/A Q859I3 31663016
    533196 6q3g:BJ (3.8) BS01 peptide ? N/A Q859I3 31663016
    533197 6q3g:BK (3.8) BS01 peptide ? N/A Q859I3 31663016
    533198 6q3g:BP (3.8) BS01 peptide ? N/A Q859I3 31663016
    533199 6q3g:BS (3.8) BS01 peptide ? N/A Q859I3 31663016
    533200 6q3g:CD (3.8) BS01 peptide ? N/A Q859I3 31663016

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).