SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2660 2661 2662 2663 2664 2665 2666 2667 2668 2669 2670 2671 2672 2673 2674 2675 2676 2677 2678 2679 2680 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    533801 6q7m:T (7.8) BS01 PLP 4.1.1.18 GO:0003824 ... P0A9H3 31992852
    533802 6q7m:V (7.8) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533803 6q7m:V (7.8) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533804 6q7m:W (7.8) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533805 6q7m:W (7.8) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533806 6q7m:X (7.8) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533807 6q7m:X (7.8) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533808 6q7m:Y (7.8) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533809 6q7m:Y (7.8) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533810 6q7m:Z (7.8) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    533811 6q7n:A (2.02) BS01 AC0 ? GO:0016787 ... O58216 31132786
    533812 6q7o:A (2.0) BS01 CA ? GO:0016787 ... O58216 31132786
    533813 6q7p:A (1.96) BS01 AC0 ? GO:0016787 ... O58216 31132786
    533814 6q7p:A (1.96) BS02 MG ? GO:0016787 ... O58216 31132786
    533815 6q7r:A (1.5) BS01 AC0 ? GO:0016787 ... O58216 31132786
    533816 6q7t:A (1.6) BS01 HOW 2.7.11.24 GO:0000165 ... P28482 30878562
    533817 6q7t:A (1.6) BS02 HOW 2.7.11.24 GO:0000165 ... P28482 30878562
    533818 6q7u:A (3.14) BS01 HLH ? N/A Q9I4X0 31709767
    533819 6q7v:A (2.56) BS01 HLK ? N/A Q9I4X0 31709767
    533820 6q7v:B (2.56) BS01 HLK ? N/A Q9I4X0 31709767
    533821 6q7w:A (2.82) BS01 HLQ ? N/A Q9I4X0 31709767
    533822 6q81:A (7.9) BS01 ADP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 30545335
    533823 6q81:A (7.9) BS02 ADP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 30545335
    533824 6q82:B (2.994) BS01 GTP 3.6.5.- GO:0003924 ... P62826 31023722
    533825 6q82:B (2.994) BS02 MG 3.6.5.- GO:0003924 ... P62826 31023722
    533826 6q84:B (3.7) BS01 GTP 3.6.5.- GO:0003924 ... P62826 31023722
    533827 6q84:B (3.7) BS02 MG 3.6.5.- GO:0003924 ... P62826 31023722
    533828 6q84:E (3.7) BS01 GTP 3.6.5.- GO:0003924 ... P62826 31023722
    533829 6q84:E (3.7) BS02 MG 3.6.5.- GO:0003924 ... P62826 31023722
    533830 6q85:A (1.99) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533831 6q85:A (1.99) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533832 6q85:A (1.99) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533833 6q85:B (1.99) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533834 6q85:B (1.99) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533835 6q85:B (1.99) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533836 6q85:C (1.99) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533837 6q85:C (1.99) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533838 6q85:C (1.99) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533839 6q85:D (1.99) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533840 6q85:D (1.99) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533841 6q85:D (1.99) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533842 6q86:A (2.008) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533843 6q86:A (2.008) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533844 6q86:A (2.008) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533845 6q86:B (2.008) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533846 6q86:B (2.008) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533847 6q86:B (2.008) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533848 6q87:A (2.541) BS01 peptide ? GO:0030246 ... Q9HYN5 30830745
    533849 6q87:A (2.541) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533850 6q87:A (2.541) BS03 CA ? GO:0030246 ... Q9HYN5 30830745
    533851 6q87:A (2.541) BS04 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533852 6q89:A (2.21) BS01 LSS N/A GO:0000166 ... N/A 30995568
    533853 6q89:A (2.21) BS02 ZN N/A GO:0000166 ... N/A 30995568
    533854 6q8a:A (2.11) BS01 HQ5 6.1.1.4 GO:0000166 ... B4RNT1 30995568
    533855 6q8a:A (2.11) BS02 ZN 6.1.1.4 GO:0000166 ... B4RNT1 30995568
    533856 6q8b:A (2.2) BS01 L3U N/A GO:0000166 ... N/A 30995568
    533857 6q8b:A (2.2) BS02 ZN N/A GO:0000166 ... N/A 30995568
    533858 6q8c:A (2.31) BS01 LSU N/A GO:0000166 ... N/A 30995568
    533859 6q8c:A (2.31) BS02 ZN N/A GO:0000166 ... N/A 30995568
    533860 6q8d:A (1.63) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533861 6q8d:A (1.63) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533862 6q8d:A (1.63) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533863 6q8e:A (1.5) BS01 PMP 2.6.1.42 GO:0003824 ... D1CCW1 30599183
    533864 6q8g:A (1.19) BS01 peptide ? GO:0030246 ... Q9HYN5 30830745
    533865 6q8g:A (1.19) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533866 6q8g:A (1.19) BS03 CA ? GO:0030246 ... Q9HYN5 30830745
    533867 6q8g:A (1.19) BS04 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533868 6q8g:B (1.19) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533869 6q8g:B (1.19) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533870 6q8g:B (1.19) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533871 6q8g:C (1.19) BS01 CA ? GO:0030246 ... Q9HYN5 30830745
    533872 6q8g:C (1.19) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533873 6q8g:C (1.19) BS03 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533874 6q8g:D (1.19) BS01 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533875 6q8g:D (1.19) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533876 6q8g:D (1.19) BS03 CA ? GO:0030246 ... Q9HYN5 30830745
    533877 6q8h:A (1.707) BS01 peptide ? GO:0030246 ... Q9HYN5 30830745
    533878 6q8h:A (1.707) BS02 CA ? GO:0030246 ... Q9HYN5 30830745
    533879 6q8h:A (1.707) BS03 CA ? GO:0030246 ... Q9HYN5 30830745
    533880 6q8h:A (1.707) BS04 ZDC ? GO:0030246 ... Q9HYN5 30830745
    533881 6q8j:A (1.8) BS01 XS4 ? GO:0000398 ... Q2TAY7 31076555
    533882 6q8j:A (1.8) BS02 XS4 ? GO:0000398 ... Q2TAY7 31076555
    533883 6q8k:A (2.29) BS01 FG9 2.7.12.1 GO:0004672 ... P49759 30731399 MOAD: ic50=290nM
    533884 6q8n:A (1.76) BS01 HQ8 3.2.1.8 GO:0004553 ... A0A1L9WG58 31263766
    533885 6q8n:A (1.76) BS02 XYP 3.2.1.8 GO:0004553 ... A0A1L9WG58 31263766
    533886 6q8n:B (1.76) BS01 HQ8 3.2.1.8 GO:0004553 ... A0A1L9WG58 31263766
    533887 6q8n:B (1.76) BS02 XYP 3.2.1.8 GO:0004553 ... A0A1L9WG58 31263766
    533888 6q8o:1 (3.605) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533889 6q8o:1 (3.605) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533890 6q8o:2 (3.605) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533891 6q8o:3 (3.605) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533892 6q8o:3 (3.605) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533893 6q8o:3 (3.605) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533894 6q8o:3 (3.605) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533895 6q8o:4 (3.605) BS01 HQH 7.1.1.- GO:0005886 ... Q56220 32811817
    533896 6q8o:6 (3.605) BS01 HQH 7.1.1.- GO:0005506 ... Q56218 32811817
    533897 6q8o:6 (3.605) BS02 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533898 6q8o:9 (3.605) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533899 6q8o:9 (3.605) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533900 6q8o:B (3.605) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533901 6q8o:B (3.605) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533902 6q8o:C (3.605) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533903 6q8o:D (3.605) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533904 6q8o:D (3.605) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533905 6q8o:D (3.605) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533906 6q8o:D (3.605) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533907 6q8o:E (3.605) BS01 HQH 7.1.1.- GO:0005886 ... Q56220 32811817
    533908 6q8o:G (3.605) BS01 HQH 7.1.1.- GO:0005506 ... Q56218 32811817
    533909 6q8o:G (3.605) BS02 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533910 6q8o:H (3.605) BS01 HQH 7.1.1.- GO:0003954 ... Q60019 32811817
    533911 6q8o:O (3.605) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533912 6q8o:O (3.605) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533913 6q8o:Q (3.605) BS01 HQH 7.1.1.- GO:0003954 ... Q60019 32811817
    533914 6q8p:A (3.0) BS01 HQB 2.7.12.1 GO:0004672 ... P49759 30731399
    533915 6q8p:B (3.0) BS01 HQB 2.7.12.1 GO:0004672 ... P49759 30731399
    533916 6q8p:C (3.0) BS01 HQB 2.7.12.1 GO:0004672 ... P49759 30731399
    533917 6q8q:B (2.0) BS01 peptide ? GO:0005179 ... P01317 N/A
    533918 6q8r:A (1.7) BS01 AR 3.2.1.17 GO:0003796 ... P00698 N/A
    533919 6q8r:A (1.7) BS02 AR 3.2.1.17 GO:0003796 ... P00698 N/A
    533920 6q8r:A (1.7) BS03 AR 3.2.1.17 GO:0003796 ... P00698 N/A
    533921 6q8u:C (1.99) BS01 rna ? GO:0001682 ... O29494 31234702
    533922 6q8u:C (1.99) BS02 rna ? GO:0001682 ... O29494 31234702
    533923 6q8u:D (1.99) BS01 rna ? GO:0001682 ... O29494 31234702
    533924 6q8u:D (1.99) BS02 rna ? GO:0001682 ... O29494 31234702
    533925 6q8w:1 (3.4) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533926 6q8w:1 (3.4) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533927 6q8w:2 (3.4) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533928 6q8w:3 (3.4) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533929 6q8w:3 (3.4) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533930 6q8w:3 (3.4) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533931 6q8w:3 (3.4) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533932 6q8w:4 (3.4) BS01 HQW 7.1.1.- GO:0005886 ... Q56220 32811817
    533933 6q8w:6 (3.4) BS01 HQW 7.1.1.- GO:0005506 ... Q56218 32811817
    533934 6q8w:6 (3.4) BS02 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533935 6q8w:9 (3.4) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533936 6q8w:9 (3.4) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533937 6q8w:B (3.4) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533938 6q8w:B (3.4) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533939 6q8w:C (3.4) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533940 6q8w:D (3.4) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533941 6q8w:D (3.4) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533942 6q8w:D (3.4) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533943 6q8w:D (3.4) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533944 6q8w:E (3.4) BS01 HQW 7.1.1.- GO:0005886 ... Q56220 32811817
    533945 6q8w:G (3.4) BS01 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533946 6q8w:O (3.4) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533947 6q8w:O (3.4) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533948 6q8x:1 (3.508) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533949 6q8x:1 (3.508) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533950 6q8x:2 (3.508) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533951 6q8x:3 (3.508) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533952 6q8x:3 (3.508) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533953 6q8x:3 (3.508) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533954 6q8x:3 (3.508) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533955 6q8x:4 (3.508) BS01 HQK 7.1.1.- GO:0005886 ... Q56220 32811817
    533956 6q8x:6 (3.508) BS01 HQK 7.1.1.- GO:0005506 ... Q56218 32811817
    533957 6q8x:6 (3.508) BS02 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533958 6q8x:9 (3.508) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533959 6q8x:9 (3.508) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533960 6q8x:B (3.508) BS01 SF4 7.1.1.- GO:0005886 ... Q56222 32811817
    533961 6q8x:B (3.508) BS02 FMN 7.1.1.- GO:0005886 ... Q56222 32811817
    533962 6q8x:C (3.508) BS01 FES 7.1.1.- GO:0003954 ... Q56221 32811817
    533963 6q8x:D (3.508) BS01 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533964 6q8x:D (3.508) BS02 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533965 6q8x:D (3.508) BS03 SF4 7.1.1.- GO:0005886 ... Q56223 32811817
    533966 6q8x:D (3.508) BS04 FES 7.1.1.- GO:0005886 ... Q56223 32811817
    533967 6q8x:E (3.508) BS01 HQK 7.1.1.- GO:0005886 ... Q56220 32811817
    533968 6q8x:E (3.508) BS02 SF4 7.1.1.- GO:0005886 ... Q56220 32811817
    533969 6q8x:G (3.508) BS01 HQK 7.1.1.- GO:0005506 ... Q56218 32811817
    533970 6q8x:G (3.508) BS02 SF4 7.1.1.- GO:0005506 ... Q56218 32811817
    533971 6q8x:O (3.508) BS01 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533972 6q8x:O (3.508) BS02 SF4 7.1.1.- GO:0003954 ... Q56224 32811817
    533973 6q8y:A (3.1) BS01 rna ? GO:0000054 ... P05750 30911188
    533974 6q8y:AA (3.1) BS01 rna ? GO:0000470 ... P17076 30911188
    533975 6q8y:AA (3.1) BS02 rna ? GO:0000470 ... P17076 30911188
    533976 6q8y:AB (3.1) BS01 rna ? GO:0002181 ... P0CX41 30911188
    533977 6q8y:AC (3.1) BS01 rna ? GO:0002181 ... P05745 30911188
    533978 6q8y:AD (3.1) BS01 rna ? GO:0002181 ... P05738 30911188
    533979 6q8y:AE (3.1) BS01 rna ? GO:0003735 ... P04449 30911188
    533980 6q8y:AF (3.1) BS01 rna ? GO:0000448 ... P49166 30911188
    533981 6q8y:AF (3.1) BS02 rna ? GO:0000448 ... P49166 30911188
    533982 6q8y:AF (3.1) BS03 ZN ? GO:0000448 ... P49166 30911188
    533983 6q8y:AG (3.1) BS01 rna ? GO:0000027 ... Q3E757 30911188
    533984 6q8y:AG (3.1) BS02 rna ? GO:0000027 ... Q3E757 30911188
    533985 6q8y:AH (3.1) BS01 rna ? GO:0003735 ... P04456 30911188
    533986 6q8y:AH (3.1) BS02 rna ? GO:0003735 ... P04456 30911188
    533987 6q8y:AI (3.1) BS01 rna ? GO:0002181 ... P49167 30911188
    533988 6q8y:AJ (3.1) BS01 rna ? GO:0002181 ... Q12690 30911188
    533989 6q8y:AJ (3.1) BS02 rna ? GO:0002181 ... Q12690 30911188
    533990 6q8y:AK (3.1) BS01 rna ? GO:0002181 ... P05743 30911188
    533991 6q8y:AK (3.1) BS02 rna ? GO:0002181 ... P05743 30911188
    533992 6q8y:AL (3.1) BS01 rna ? GO:0002181 ... P04650 30911188
    533993 6q8y:AL (3.1) BS02 rna ? GO:0002181 ... P04650 30911188
    533994 6q8y:AM (3.1) BS01 rna ? GO:0000027 ... P36105 30911188
    533995 6q8y:AN (3.1) BS01 rna ? GO:0002181 ... P0C2H6 30911188
    533996 6q8y:AO (3.1) BS01 rna ? GO:0003735 ... P0CH08 30911188
    533997 6q8y:AO (3.1) BS02 ZN ? GO:0003735 ... P0CH08 30911188
    533998 6q8y:AP (3.1) BS01 rna ? GO:0002181 ... P0CX27 30911188
    533999 6q8y:AP (3.1) BS02 rna ? GO:0002181 ... P0CX27 30911188
    534000 6q8y:AP (3.1) BS03 ZN ? GO:0002181 ... P0CX27 30911188

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).