SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    536201 6qnq:A5 (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 31175275
    536202 6qnq:A8 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ4 31175275
    536203 6qnq:A8 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ4 31175275
    536204 6qnq:AA (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 31175275
    536205 6qnq:AI (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 31175275
    536206 6qnq:B5 (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 31175275
    536207 6qnq:B8 (3.5) BS01 rna ? GO:0003735 ... P60490 31175275
    536208 6qnq:B8 (3.5) BS02 rna ? GO:0003735 ... P60490 31175275
    536209 6qnq:BA (3.5) BS01 rna ? GO:0003723 ... P80380 31175275
    536210 6qnq:BI (3.5) BS01 rna ? GO:0003723 ... P80380 31175275
    536211 6qnq:BI (3.5) BS02 MG ? GO:0003723 ... P80380 31175275
    536212 6qnq:C5 (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 31175275
    536213 6qnq:C8 (3.5) BS01 rna ? GO:0000027 ... P60491 31175275
    536214 6qnq:D5 (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 31175275
    536215 6qnq:D5 (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 31175275
    536216 6qnq:D8 (3.5) BS01 rna ? GO:0003723 ... P60492 31175275
    536217 6qnq:E5 (3.5) BS01 rna ? GO:0003735 ... P60493 31175275
    536218 6qnq:E5 (3.5) BS02 rna ? GO:0003735 ... P60493 31175275
    536219 6qnq:E5 (3.5) BS03 rna ? GO:0003735 ... P60493 31175275
    536220 6qnq:E8 (3.5) BS01 rna ? GO:0003735 ... Q5SHP3 31175275
    536221 6qnq:F5 (3.5) BS01 rna ? GO:0003735 ... P60494 31175275
    536222 6qnq:F5 (3.5) BS02 rna ? GO:0003735 ... P60494 31175275
    536223 6qnq:F8 (3.5) BS01 rna ? GO:0003735 ... Q5SHP0 31175275
    536224 6qnq:G5 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 31175275
    536225 6qnq:G8 (3.5) BS01 rna ? GO:0003723 ... Q5SHP9 31175275
    536226 6qnq:H5 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 31175275
    536227 6qnq:H5 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 31175275
    536228 6qnq:H8 (3.5) BS01 rna ? GO:0003723 ... Q5SHZ1 31175275
    536229 6qnq:H8 (3.5) BS02 rna ? GO:0003723 ... Q5SHZ1 31175275
    536230 6qnq:I5 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 31175275
    536231 6qnq:I8 (3.5) BS01 rna ? GO:0003735 ... P60493 31175275
    536232 6qnq:I8 (3.5) BS02 rna ? GO:0003735 ... P60493 31175275
    536233 6qnq:J5 (3.5) BS01 rna ? GO:0003735 ... P80339 31175275
    536234 6qnq:J8 (3.5) BS01 rna ? GO:0003735 ... P60494 31175275
    536235 6qnq:K5 (3.5) BS01 rna ? GO:0000049 ... P35871 31175275
    536236 6qnq:K8 (3.5) BS01 rna ? GO:0003735 ... Q5SHP6 31175275
    536237 6qnq:L5 (3.5) BS01 rna ? GO:0003735 ... P80340 31175275
    536238 6qnq:L8 (3.5) BS01 rna ? GO:0003735 ... Q5SHQ6 31175275
    536239 6qnq:L8 (3.5) BS02 rna ? GO:0003735 ... Q5SHQ6 31175275
    536240 6qnq:M5 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 31175275
    536241 6qnq:M8 (3.5) BS01 rna ? GO:0003735 ... Q5SJE1 31175275
    536242 6qnq:N8 (3.5) BS01 rna ? GO:0003735 ... P80339 31175275
    536243 6qnq:O8 (3.5) BS01 rna ? GO:0000049 ... P35871 31175275
    536244 6qnq:P8 (3.5) BS01 rna ? GO:0003735 ... P80340 31175275
    536245 6qnq:Q8 (3.5) BS01 rna ? GO:0003735 ... Q5SKU1 31175275
    536246 6qnr:11 (3.1) BS01 rna ? GO:0002181 ... P60405 31175275
    536247 6qnr:12 (3.1) BS01 rna ? GO:0003735 ... P80371 31175275
    536248 6qnr:15 (3.1) BS01 rna ? GO:0003729 ... P60488 31175275
    536249 6qnr:19 (3.1) BS01 rna ? GO:0002181 ... P60405 31175275
    536250 6qnr:19 (3.1) BS02 rna ? GO:0002181 ... P60405 31175275
    536251 6qnr:1A (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 31175275
    536252 6qnr:1E (3.1) BS01 rna ? GO:0003735 ... P80371 31175275
    536253 6qnr:1I (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 31175275
    536254 6qnr:21 (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 31175275
    536255 6qnr:22 (3.1) BS01 rna ? GO:0003676 ... P80372 31175275
    536256 6qnr:22 (3.1) BS02 rna ? GO:0003676 ... P80372 31175275
    536257 6qnr:25 (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 31175275
    536258 6qnr:25 (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 31175275
    536259 6qnr:29 (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 31175275
    536260 6qnr:2A (3.1) BS01 rna ? GO:0003735 ... P80376 31175275
    536261 6qnr:2E (3.1) BS01 rna ? GO:0003676 ... P80372 31175275
    536262 6qnr:2E (3.1) BS02 rna ? GO:0003676 ... P80372 31175275
    536263 6qnr:2I (3.1) BS01 rna ? GO:0003735 ... P80376 31175275
    536264 6qnr:2I (3.1) BS02 rna ? GO:0003735 ... P80376 31175275
    536265 6qnr:31 (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 31175275
    536266 6qnr:32 (3.1) BS01 rna ? GO:0003723 ... P80373 31175275
    536267 6qnr:32 (3.1) BS02 rna ? GO:0003723 ... P80373 31175275
    536268 6qnr:32 (3.1) BS03 SF4 ? GO:0003723 ... P80373 31175275
    536269 6qnr:35 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 31175275
    536270 6qnr:38 (3.1) BS01 rna ? GO:0005840 ... Q8VVE3 31175275
    536271 6qnr:39 (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 31175275
    536272 6qnr:3A (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 31175275
    536273 6qnr:3E (3.1) BS01 rna ? GO:0003723 ... P80373 31175275
    536274 6qnr:3E (3.1) BS02 rna ? GO:0003723 ... P80373 31175275
    536275 6qnr:3E (3.1) BS03 SF4 ? GO:0003723 ... P80373 31175275
    536276 6qnr:3I (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 31175275
    536277 6qnr:41 (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 31175275
    536278 6qnr:41 (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 31175275
    536279 6qnr:41 (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 31175275
    536280 6qnr:41 (3.1) BS04 MG ? GO:0000049 ... Q5SHQ0 31175275
    536281 6qnr:42 (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 31175275
    536282 6qnr:42 (3.1) BS02 rna ? GO:0003723 ... Q5SHQ5 31175275
    536283 6qnr:45 (3.1) BS01 rna ? GO:0000049 ... P60489 31175275
    536284 6qnr:45 (3.1) BS02 rna ? GO:0000049 ... P60489 31175275
    536285 6qnr:45 (3.1) BS03 rna ? GO:0000049 ... P60489 31175275
    536286 6qnr:49 (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 31175275
    536287 6qnr:49 (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 31175275
    536288 6qnr:49 (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 31175275
    536289 6qnr:49 (3.1) BS04 MG ? GO:0000049 ... Q5SHQ0 31175275
    536290 6qnr:4A (3.1) BS01 rna ? GO:0000049 ... P80377 31175275
    536291 6qnr:4E (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 31175275
    536292 6qnr:4E (3.1) BS02 rna ? GO:0003723 ... Q5SHQ5 31175275
    536293 6qnr:4I (3.1) BS01 rna ? GO:0000049 ... P80377 31175275
    536294 6qnr:4I (3.1) BS02 rna ? GO:0000049 ... P80377 31175275
    536295 6qnr:51 (3.1) BS01 rna ? GO:0002181 ... P0DOY8 31175275
    536296 6qnr:52 (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 31175275
    536297 6qnr:55 (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 31175275
    536298 6qnr:58 (3.1) BS01 rna ? GO:0003729 ... P60488 31175275
    536299 6qnr:59 (3.1) BS01 rna ? GO:0002181 ... P0DOY8 31175275
    536300 6qnr:5A (3.1) BS01 rna ? GO:0003735 ... P0DOY6 31175275
    536301 6qnr:5A (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 31175275
    536302 6qnr:5E (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 31175275
    536303 6qnr:5I (3.1) BS01 rna ? GO:0003735 ... P0DOY6 31175275
    536304 6qnr:5I (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 31175275
    536305 6qnr:61 (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 31175275
    536306 6qnr:62 (3.1) BS01 rna ? GO:0000049 ... P17291 31175275
    536307 6qnr:62 (3.1) BS02 rna ? GO:0000049 ... P17291 31175275
    536308 6qnr:65 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 31175275
    536309 6qnr:65 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 31175275
    536310 6qnr:68 (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 31175275
    536311 6qnr:68 (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 31175275
    536312 6qnr:69 (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 31175275
    536313 6qnr:69 (3.1) BS02 rna ? GO:0003735 ... Q5SLQ1 31175275
    536314 6qnr:6A (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 31175275
    536315 6qnr:6A (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 31175275
    536316 6qnr:6E (3.1) BS01 rna ? GO:0000049 ... P17291 31175275
    536317 6qnr:6E (3.1) BS02 rna ? GO:0000049 ... P17291 31175275
    536318 6qnr:6I (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 31175275
    536319 6qnr:6I (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 31175275
    536320 6qnr:71 (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 31175275
    536321 6qnr:71 (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 31175275
    536322 6qnr:72 (3.1) BS01 rna ? GO:0003735 ... P0DOY9 31175275
    536323 6qnr:75 (3.1) BS01 rna ? GO:0003735 ... P60490 31175275
    536324 6qnr:75 (3.1) BS02 rna ? GO:0003735 ... P60490 31175275
    536325 6qnr:78 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 31175275
    536326 6qnr:79 (3.1) BS01 rna ? GO:0000049 ... Q5SLP7 31175275
    536327 6qnr:79 (3.1) BS02 rna ? GO:0000049 ... Q5SLP7 31175275
    536328 6qnr:7A (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 31175275
    536329 6qnr:7E (3.1) BS01 rna ? GO:0003735 ... P0DOY9 31175275
    536330 6qnr:7I (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 31175275
    536331 6qnr:82 (3.1) BS01 rna ? GO:0000049 ... P80374 31175275
    536332 6qnr:82 (3.1) BS02 rna ? GO:0000049 ... P80374 31175275
    536333 6qnr:85 (3.1) BS01 rna ? GO:0000027 ... P60491 31175275
    536334 6qnr:88 (3.1) BS01 rna ? GO:0000049 ... P60489 31175275
    536335 6qnr:88 (3.1) BS02 rna ? GO:0000049 ... P60489 31175275
    536336 6qnr:88 (3.1) BS03 rna ? GO:0000049 ... P60489 31175275
    536337 6qnr:8A (3.1) BS01 rna ? GO:0003735 ... P0DOY7 31175275
    536338 6qnr:8E (3.1) BS01 rna ? GO:0000049 ... P80374 31175275
    536339 6qnr:8E (3.1) BS02 rna ? GO:0000049 ... P80374 31175275
    536340 6qnr:8I (3.1) BS01 rna ? GO:0003735 ... P0DOY7 31175275
    536341 6qnr:95 (3.1) BS01 rna ? GO:0003723 ... P60492 31175275
    536342 6qnr:98 (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 31175275
    536343 6qnr:9A (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 31175275
    536344 6qnr:9I (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 31175275
    536345 6qnr:A5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 31175275
    536346 6qnr:A8 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 31175275
    536347 6qnr:A8 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 31175275
    536348 6qnr:AA (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 31175275
    536349 6qnr:AI (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 31175275
    536350 6qnr:B5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 31175275
    536351 6qnr:B8 (3.1) BS01 rna ? GO:0003735 ... P60490 31175275
    536352 6qnr:B8 (3.1) BS02 rna ? GO:0003735 ... P60490 31175275
    536353 6qnr:BA (3.1) BS01 rna ? GO:0003723 ... P80380 31175275
    536354 6qnr:BI (3.1) BS01 rna ? GO:0003723 ... P80380 31175275
    536355 6qnr:C5 (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 31175275
    536356 6qnr:C8 (3.1) BS01 rna ? GO:0000027 ... P60491 31175275
    536357 6qnr:D5 (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 31175275
    536358 6qnr:D8 (3.1) BS01 rna ? GO:0003723 ... P60492 31175275
    536359 6qnr:E5 (3.1) BS01 rna ? GO:0003735 ... P60493 31175275
    536360 6qnr:E5 (3.1) BS02 rna ? GO:0003735 ... P60493 31175275
    536361 6qnr:E5 (3.1) BS03 rna ? GO:0003735 ... P60493 31175275
    536362 6qnr:E8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 31175275
    536363 6qnr:F5 (3.1) BS01 rna ? GO:0003735 ... P60494 31175275
    536364 6qnr:F8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 31175275
    536365 6qnr:F8 (3.1) BS02 MG ? GO:0003735 ... Q5SHP0 31175275
    536366 6qnr:G5 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 31175275
    536367 6qnr:G8 (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 31175275
    536368 6qnr:H5 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 31175275
    536369 6qnr:H5 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 31175275
    536370 6qnr:H8 (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 31175275
    536371 6qnr:H8 (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 31175275
    536372 6qnr:I5 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 31175275
    536373 6qnr:I5 (3.1) BS02 rna ? GO:0003735 ... Q5SJE1 31175275
    536374 6qnr:I8 (3.1) BS01 rna ? GO:0003735 ... P60493 31175275
    536375 6qnr:I8 (3.1) BS02 rna ? GO:0003735 ... P60493 31175275
    536376 6qnr:I8 (3.1) BS03 rna ? GO:0003735 ... P60493 31175275
    536377 6qnr:J5 (3.1) BS01 rna ? GO:0003735 ... P80339 31175275
    536378 6qnr:J8 (3.1) BS01 rna ? GO:0003735 ... P60494 31175275
    536379 6qnr:K5 (3.1) BS01 rna ? GO:0000049 ... P35871 31175275
    536380 6qnr:K8 (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 31175275
    536381 6qnr:L5 (3.1) BS01 rna ? GO:0003735 ... P80340 31175275
    536382 6qnr:L8 (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 31175275
    536383 6qnr:L8 (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 31175275
    536384 6qnr:L8 (3.1) BS03 MG ? GO:0003735 ... Q5SHQ6 31175275
    536385 6qnr:M5 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 31175275
    536386 6qnr:M8 (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 31175275
    536387 6qnr:M8 (3.1) BS02 rna ? GO:0003735 ... Q5SJE1 31175275
    536388 6qnr:N8 (3.1) BS01 rna ? GO:0003735 ... P80339 31175275
    536389 6qnr:O8 (3.1) BS01 rna ? GO:0000049 ... P35871 31175275
    536390 6qnr:P8 (3.1) BS01 rna ? GO:0003735 ... P80340 31175275
    536391 6qnr:Q8 (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 31175275
    536392 6qns:A (2.4) BS01 peptide 3.4.24.69 GO:0005576 ... P10844 32182233
    536393 6qns:A (2.4) BS02 GAL 3.4.24.69 GO:0005576 ... P10844 32182233
    536394 6qns:A (2.4) BS03 SIA 3.4.24.69 GO:0005576 ... P10844 32182233
    536395 6qnx:A (2.7) BS01 peptide ? N/A Q8N3U4 31905366
    536396 6qnx:B (2.7) BS01 peptide ? GO:0007062 ... O60216 31905366
    536397 6qo0:A (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    536398 6qo0:B (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    536399 6qo0:C (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    536400 6qo0:D (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).