SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    537601 6qvo:C (2.45) BS01 6MA 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 32144205
    537602 6qvo:D (2.45) BS01 6MA 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 32144205
    537603 6qvt:A (1.7) BS01 NCC 2.4.3.1 GO:0006486 ... P15907 32971290
    537604 6qvt:B (1.7) BS01 NCC 2.4.3.1 GO:0006486 ... P15907 32971290
    537605 6qvv:A (2.4) BS01 MN3 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537606 6qvv:B (2.4) BS01 MN3 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537607 6qw0:A (1.5) BS01 MN3 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537608 6qw0:B (1.5) BS01 MN3 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537609 6qw3:A (1.3) BS01 CA ? GO:0051015 ... P06396 31416615
    537610 6qw4:A (2.1) BS01 peptide ? GO:0009374 ... P22629 33639211
    537611 6qw5:A (1.988) BS01 MN 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537612 6qw5:A (1.988) BS02 MN 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537613 6qw5:A (1.988) BS03 XI7 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537614 6qw5:B (1.988) BS01 MN 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537615 6qw5:B (1.988) BS02 MN 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537616 6qw5:B (1.988) BS03 XI7 2.7.7.48
    3.1.-.-
    N/A P37800 31584100
    537617 6qw6:41 (2.92) BS01 rna ? GO:0000243 ... P62314 30975767
    537618 6qw6:42 (2.92) BS01 rna ? GO:0000245 ... P62316 30975767
    537619 6qw6:43 (2.92) BS01 rna ? GO:0000243 ... P62318 30975767
    537620 6qw6:4A (2.92) BS01 rna ? GO:0000244 ... O43395 30975767
    537621 6qw6:4A (2.92) BS02 rna ? GO:0000244 ... O43395 30975767
    537622 6qw6:4C (2.92) BS01 rna ? GO:0000244 ... Q8WWY3 30975767
    537623 6qw6:4C (2.92) BS02 rna ? GO:0000244 ... Q8WWY3 30975767
    537624 6qw6:4D (2.92) BS01 rna ? GO:0000398 ... P55769 30975767
    537625 6qw6:4D (2.92) BS02 rna ? GO:0000398 ... P55769 30975767
    537626 6qw6:4b (2.92) BS01 rna ? GO:0000387 ... P14678 30975767
    537627 6qw6:4e (2.92) BS01 rna ? GO:0000245 ... P62304 30975767
    537628 6qw6:4f (2.92) BS01 rna ? GO:0000387 ... P62306 30975767
    537629 6qw6:4g (2.92) BS01 rna ? GO:0000245 ... P62308 30975767
    537630 6qw6:51 (2.92) BS01 rna ? GO:0000243 ... P62314 30975767
    537631 6qw6:52 (2.92) BS01 rna ? GO:0000245 ... P62316 30975767
    537632 6qw6:53 (2.92) BS01 rna ? GO:0000243 ... P62318 30975767
    537633 6qw6:5A (2.92) BS01 rna ? GO:0000244 ... Q6P2Q9 30975767
    537634 6qw6:5A (2.92) BS02 rna ? GO:0000244 ... Q6P2Q9 30975767
    537635 6qw6:5A (2.92) BS03 IHP ? GO:0000244 ... Q6P2Q9 30975767
    537636 6qw6:5C (2.92) BS01 MG ? GO:0003924 ... Q15029 30975767
    537637 6qw6:5C (2.92) BS02 GTP ? GO:0003924 ... Q15029 30975767
    537638 6qw6:5D (2.92) BS01 rna ? GO:0000245 ... P83876 30975767
    537639 6qw6:5J (2.92) BS01 rna ? GO:0000244 ... O94906 30975767
    537640 6qw6:5J (2.92) BS02 rna ? GO:0000244 ... O94906 30975767
    537641 6qw6:5O (2.92) BS01 rna ? GO:0000375 ... Q96DI7 30975767
    537642 6qw6:5X (2.92) BS01 rna 3.6.4.13 GO:0000354 ... Q9BUQ8 30975767
    537643 6qw6:5b (2.92) BS01 rna ? GO:0000387 ... P14678 30975767
    537644 6qw6:5e (2.92) BS01 rna ? GO:0000245 ... P62304 30975767
    537645 6qw6:5f (2.92) BS01 rna ? GO:0000387 ... P62306 30975767
    537646 6qw6:5g (2.92) BS01 rna ? GO:0000245 ... P62308 30975767
    537647 6qw6:62 (2.92) BS01 rna ? GO:0000244 ... Q9Y333 30975767
    537648 6qw6:63 (2.92) BS01 rna ? GO:0000398 ... P62310 30975767
    537649 6qw6:64 (2.92) BS01 rna ? GO:0000387 ... Q9Y4Z0 30975767
    537650 6qw6:66 (2.92) BS01 rna ? GO:0000398 ... P62312 30975767
    537651 6qw6:68 (2.92) BS01 rna ? GO:0000398 ... O95777 30975767
    537652 6qw6:R (2.92) BS01 rna ? GO:0000398 ... Q9BTD8 30975767
    537653 6qw6:R (2.92) BS02 rna ? GO:0000398 ... Q9BTD8 30975767
    537654 6qw6:S (2.92) BS01 rna ? GO:0000387 ... O43290 30975767
    537655 6qw6:U (2.92) BS01 ZN 3.4.19.12 GO:0000245 ... Q53GS9 30975767
    537656 6qw6:X (2.92) BS01 rna ? GO:0000398 ... Q8WVK2 30975767
    537657 6qw7:A (1.78) BS01 DSN 3.5.2.6 GO:0008800 ... Q9RBQ1 31383664
    537658 6qw7:B (1.78) BS01 MK7 3.5.2.6 GO:0008800 ... Q9RBQ1 31383664 MOAD: ic50=470nM
    537659 6qw8:A (1.1) BS01 MK7 3.5.2.6 GO:0008800 ... G3G192 31383664
    537660 6qw9:A (1.04) BS01 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537661 6qw9:A (1.04) BS02 JJT 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537662 6qwa:A (1.06) BS01 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537663 6qwa:A (1.06) BS02 JJT 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537664 6qwb:A (1.04) BS01 JJT 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537665 6qwb:A (1.04) BS02 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537666 6qwc:A (1.3) BS01 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664
    537667 6qwf:A (2.7) BS01 dna ? GO:0003677 ... P22262 32179627
    537668 6qwf:A (2.7) BS02 dna ? GO:0003677 ... P22262 32179627
    537669 6qwf:B (2.7) BS01 dna ? GO:0003677 ... P22262 32179627
    537670 6qwf:B (2.7) BS02 dna ? GO:0003677 ... P22262 32179627
    537671 6qwg:A (1.9) BS01 NO2 1.7.2.1 GO:0005507 ... P25006 31709063
    537672 6qwg:A (1.9) BS02 CU 1.7.2.1 GO:0005507 ... P25006 31709063
    537673 6qwg:A (1.9) BS03 CU 1.7.2.1 GO:0005507 ... P25006 31709063
    537674 6qwh:A (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537675 6qwh:A (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537676 6qwh:B (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537677 6qwh:B (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537678 6qwi:A (2.85) BS01 JJW 3.2.1.21 GO:0004553 ... P22073 31226649
    537679 6qwi:B (2.85) BS01 JJW 3.2.1.21 GO:0004553 ... P22073 31226649
    537680 6qwk:A (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537681 6qwk:A (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537682 6qwk:B (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537683 6qwk:B (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537684 6qwl:E (4.1) BS01 rna 3.1.-.- GO:0003723 ... O36432 31485076
    537685 6qwl:E (4.1) BS02 rna 3.1.-.- GO:0003723 ... O36432 31485076
    537686 6qwl:K (4.1) BS01 rna 2.7.7.48 GO:0000166 ... O36430 31485076
    537687 6qwl:K (4.1) BS02 rna 2.7.7.48 GO:0000166 ... O36430 31485076
    537688 6qwm:A (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537689 6qwm:A (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537690 6qwm:B (2.9) BS01 dna ? GO:0003677 ... P22262 32179627
    537691 6qwm:B (2.9) BS02 dna ? GO:0003677 ... P22262 32179627
    537692 6qwo:A (2.0) BS01 ZN ? GO:0046872 ... Q9S5W7 31270241
    537693 6qwo:A (2.0) BS02 ZN ? GO:0046872 ... Q9S5W7 31270241
    537694 6qwo:B (2.0) BS01 ZN ? GO:0046872 ... Q9S5W7 31270241
    537695 6qwo:B (2.0) BS02 ZN ? GO:0046872 ... Q9S5W7 31270241
    537696 6qwu:A (1.4) BS01 COA ? GO:0000287 ... B1MD73 32128972
    537697 6qwu:A (1.4) BS02 MN ? GO:0000287 ... B1MD73 32128972
    537698 6qww:A (1.35) BS01 CU 3.2.1.17 GO:0003796 ... P00698 N/A
    537699 6qx1:A (2.65) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537700 6qx1:A (2.65) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537701 6qx1:A (2.65) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537702 6qx1:B (2.65) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537703 6qx1:B (2.65) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537704 6qx1:B (2.65) BS03 MN 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537705 6qx1:B (2.65) BS04 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537706 6qx1:C (2.65) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537707 6qx1:C (2.65) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537708 6qx1:C (2.65) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537709 6qx1:D (2.65) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537710 6qx1:D (2.65) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537711 6qx1:D (2.65) BS03 MN 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537712 6qx1:D (2.65) BS04 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537713 6qx2:A (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537714 6qx2:A (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537715 6qx2:A (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537716 6qx2:B (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537717 6qx2:B (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537718 6qx2:B (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537719 6qx2:C (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537720 6qx2:C (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537721 6qx2:C (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537722 6qx2:D (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537723 6qx2:D (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537724 6qx2:D (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537725 6qx2:J (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537726 6qx2:J (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537727 6qx2:J (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537728 6qx2:K (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537729 6qx2:K (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537730 6qx2:K (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537731 6qx2:L (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537732 6qx2:L (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537733 6qx2:L (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537734 6qx2:M (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537735 6qx2:M (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537736 6qx2:M (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537737 6qx2:R (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537738 6qx2:R (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537739 6qx2:R (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537740 6qx2:S (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537741 6qx2:S (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537742 6qx2:S (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537743 6qx2:T (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537744 6qx2:T (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537745 6qx2:T (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537746 6qx2:U (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537747 6qx2:U (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537748 6qx2:U (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537749 6qx2:a (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537750 6qx2:a (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537751 6qx2:b (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537752 6qx2:b (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537753 6qx2:b (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537754 6qx2:c (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537755 6qx2:c (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537756 6qx2:c (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537757 6qx2:d (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537758 6qx2:d (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537759 6qx2:d (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537760 6qx2:j (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537761 6qx2:j (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537762 6qx2:j (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537763 6qx2:k (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537764 6qx2:k (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537765 6qx2:k (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537766 6qx2:l (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537767 6qx2:l (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537768 6qx2:l (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537769 6qx2:m (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537770 6qx2:m (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537771 6qx2:m (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537772 6qx2:r (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537773 6qx2:r (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537774 6qx2:r (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537775 6qx2:s (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537776 6qx2:s (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537777 6qx2:s (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537778 6qx2:t (3.4) BS01 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537779 6qx2:t (3.4) BS02 dna 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537780 6qx2:t (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... Q99XG5 30962087
    537781 6qx2:u (3.4) BS01 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537782 6qx2:u (3.4) BS02 dna 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537783 6qx2:u (3.4) BS03 JK8 5.6.2.2 GO:0003677 ... P0A0K8 30962087
    537784 6qx3:A (3.79) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537785 6qx3:A (3.79) BS02 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537786 6qx3:B (3.79) BS01 rna 2.7.7.48 GO:0000166 ... Q910D6 31485076
    537787 6qx3:B (3.79) BS02 rna 2.7.7.48 GO:0000166 ... Q910D6 31485076
    537788 6qx6:A (1.65) BS01 DBV ? GO:0010024 ... L1IWQ9 31366727
    537789 6qx6:B (1.65) BS01 DBV ? GO:0010024 ... L1IWQ9 31366727
    537790 6qx8:A (4.07) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537791 6qx8:B (4.07) BS01 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    537792 6qx8:E (4.07) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537793 6qx8:F (4.07) BS01 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    537794 6qx9:11 (3.28) BS01 rna ? GO:0000243 ... P62314 30975767
    537795 6qx9:12 (3.28) BS01 rna ? GO:0000245 ... P62316 30975767
    537796 6qx9:13 (3.28) BS01 rna ? GO:0000243 ... P62318 30975767
    537797 6qx9:1A (3.28) BS01 rna ? GO:0000398 ... P09012 30975767
    537798 6qx9:1C (3.28) BS01 rna ? GO:0000243 ... P09234 30975767
    537799 6qx9:1C (3.28) BS02 rna ? GO:0000243 ... P09234 30975767
    537800 6qx9:1C (3.28) BS03 ZN ? GO:0000243 ... P09234 30975767

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).