SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    53601 1uer:B (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P19665 12962504
    53602 1uer:C (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P19665 12962504
    53603 1uer:D (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P19665 12962504
    53604 1ues:A (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P19665 12962504
    53605 1ues:B (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P19665 12962504
    53606 1ues:C (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P19665 12962504
    53607 1ues:D (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P19665 12962504
    53608 1uet:A (2.0) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    53609 1uet:A (2.0) BS02 CA 2.7.7.72 GO:0000049 ... O28126 14592988
    53610 1ueu:A (2.0) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    53611 1ueu:A (2.0) BS02 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    53612 1ueu:A (2.0) BS03 CTP 2.7.7.72 GO:0000049 ... O28126 14592988
    53613 1uev:A (2.7) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    53614 1uev:A (2.7) BS02 ATP 2.7.7.72 GO:0000049 ... O28126 14592988
    53615 1uf2:A (3.5) BS01 peptide ? GO:0005198 ... P22472 14527391
    53616 1uf3:A (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53617 1uf3:A (2.1) BS02 CA ? GO:0046872 ... P84068 N/A
    53618 1uf3:B (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53619 1uf3:C (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53620 1uf3:D (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53621 1uf3:D (2.1) BS02 CA ? GO:0046872 ... P84068 N/A
    53622 1uf3:E (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53623 1uf3:F (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53624 1uf3:F (2.1) BS02 CA ? GO:0046872 ... P84068 N/A
    53625 1uf3:G (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53626 1uf3:H (2.1) BS01 CA ? GO:0046872 ... P84068 N/A
    53627 1uf5:A (1.6) BS01 CDT 3.5.1.77 GO:0016787 ... P60327 N/A
    53628 1uf5:B (1.6) BS01 CDT 3.5.1.77 GO:0016787 ... P60327 N/A
    53629 1uf7:A (1.9) BS01 CDV 3.5.1.77 GO:0016787 ... P60327 N/A
    53630 1uf7:B (1.9) BS01 CDV 3.5.1.77 GO:0016787 ... P60327 N/A
    53631 1uf8:A (1.8) BS01 ING 3.5.1.77 GO:0016787 ... P60327 N/A
    53632 1uf8:B (1.8) BS01 ING 3.5.1.77 GO:0016787 ... P60327 N/A
    53633 1uf9:B (2.8) BS01 PO4 2.7.1.24 GO:0004140 ... Q56416 15526298
    53634 1uf9:C (2.8) BS01 ATP 2.7.1.24 GO:0004140 ... Q56416 15526298
    53635 1ufj:A (1.6) BS01 CZM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 15106972
    53636 1ug9:A (2.5) BS01 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53637 1ug9:A (2.5) BS02 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53638 1ug9:A (2.5) BS03 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53639 1ug9:A (2.5) BS04 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53640 1ug9:A (2.5) BS05 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53641 1ug9:A (2.5) BS06 CA 3.2.1.70 GO:0003824 ... Q9LBQ9 14660574
    53642 1uga:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53643 1ugb:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53644 1ugb:A (2.0) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974 BindingDB: Ki=1500000nM
    53645 1ugc:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53646 1ugd:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53647 1uge:A (1.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53648 1ugf:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53649 1ugf:A (2.0) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974 BindingDB: Ki=1500000nM
    53650 1ugg:A (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 8987974
    53651 1ugp:A (1.63) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    53652 1ugp:A (1.63) BS02 BUA 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    53653 1ugr:A (1.8) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    53654 1ugs:A (2.0) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    53655 1ugw:A (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    53656 1ugw:A (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    53657 1ugw:A (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    53658 1ugw:A (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    53659 1ugw:C (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    53660 1ugw:C (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    53661 1ugw:C (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    53662 1ugw:C (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    53663 1ugw:E (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    53664 1ugw:E (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    53665 1ugw:E (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    53666 1ugw:E (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    53667 1ugw:G (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    53668 1ugw:G (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    53669 1ugw:G (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    53670 1ugw:G (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    53671 1ugx:A (1.6) BS01 peptide ? GO:0019862 ... P18670 12946359
    53672 1ugx:A (1.6) BS02 MGC ? GO:0019862 ... P18670 12946359
    53673 1ugy:A (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    53674 1ugy:A (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    53675 1ugy:A (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    53676 1ugy:A (2.4) BS04 GLC ? GO:0019862 ... P18670 12946359
    53677 1ugy:A (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    53678 1ugy:C (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    53679 1ugy:C (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    53680 1ugy:C (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    53681 1ugy:C (2.4) BS04 GLC ? GO:0019862 ... P18670 12946359
    53682 1ugy:C (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    53683 1ugy:E (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    53684 1ugy:E (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    53685 1ugy:E (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    53686 1ugy:E (2.4) BS04 BGC ? GO:0019862 ... P18670 12946359
    53687 1ugy:E (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    53688 1ugy:G (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    53689 1ugy:G (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    53690 1ugy:G (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    53691 1ugy:G (2.4) BS04 BGC ? GO:0019862 ... P18670 12946359
    53692 1ugy:G (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    53693 1uh0:A (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53694 1uh0:A (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53695 1uh0:A (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    53696 1uh0:C (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53697 1uh0:C (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53698 1uh0:C (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    53699 1uh0:E (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53700 1uh0:E (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53701 1uh0:E (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    53702 1uh0:G (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53703 1uh0:G (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53704 1uh0:G (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    53705 1uh1:A (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53706 1uh1:A (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53707 1uh1:A (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    53708 1uh1:C (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53709 1uh1:C (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53710 1uh1:C (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    53711 1uh1:E (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53712 1uh1:E (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53713 1uh1:E (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    53714 1uh1:G (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    53715 1uh1:G (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    53716 1uh1:G (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    53717 1uh2:A (2.0) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53718 1uh2:A (2.0) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53719 1uh2:A (2.0) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53720 1uh2:A (2.0) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53721 1uh2:A (2.0) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53722 1uh2:A (2.0) BS06 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53723 1uh2:A (2.0) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53724 1uh2:A (2.0) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53725 1uh2:A (2.0) BS09 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53726 1uh2:A (2.0) BS10 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53727 1uh2:A (2.0) BS11 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53728 1uh3:A (2.6) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53729 1uh3:A (2.6) BS02 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    53730 1uh3:A (2.6) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53731 1uh3:A (2.6) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53732 1uh3:A (2.6) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53733 1uh3:A (2.6) BS06 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    53734 1uh3:A (2.6) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53735 1uh3:A (2.6) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53736 1uh3:A (2.6) BS09 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53737 1uh3:A (2.6) BS10 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    53738 1uh3:A (2.6) BS11 ACI 3.2.1.135 GO:0004553 ... Q60053 14687576
    53739 1uh3:A (2.6) BS12 HSD 3.2.1.135 GO:0004553 ... Q60053 14687576
    53740 1uh3:A (2.6) BS13 ACI 3.2.1.135 GO:0004553 ... Q60053 14687576
    53741 1uh3:A (2.6) BS14 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53742 1uh3:A (2.6) BS15 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53743 1uh3:A (2.6) BS16 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53744 1uh4:A (1.8) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53745 1uh4:A (1.8) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53746 1uh4:A (1.8) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53747 1uh4:A (1.8) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53748 1uh4:A (1.8) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53749 1uh4:A (1.8) BS06 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53750 1uh4:A (1.8) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53751 1uh4:A (1.8) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53752 1uh4:A (1.8) BS09 BGC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53753 1uh4:A (1.8) BS10 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53754 1uh4:A (1.8) BS11 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53755 1uh4:A (1.8) BS12 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53756 1uh4:A (1.8) BS13 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    53757 1uh4:A (1.8) BS14 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53758 1uh4:A (1.8) BS15 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53759 1uh4:A (1.8) BS16 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    53760 1uh5:A (2.2) BS01 TCL 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426 BindingDB: IC50=200nM
    53761 1uh5:A (2.2) BS02 NAD 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426
    53762 1uh5:B (2.2) BS01 TCL 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426 BindingDB: IC50=200nM
    53763 1uh5:B (2.2) BS02 NAD 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426
    53764 1uha:A (1.5) BS01 CA ? GO:0008061 ... P83790 15039554
    53765 1uhb:A (2.15) BS01 peptide 3.4.21.4 GO:0004252 ... P00761 15106996
    53766 1uhb:A (2.15) BS02 CA 3.4.21.4 GO:0004252 ... P00761 15106996
    53767 1uhb:B (2.15) BS01 peptide 3.4.21.4 GO:0004252 ... P00761 15106996
    53768 1uhd:A (2.0) BS01 peptide 4.1.1.11 GO:0004068 ... P56065 15184017
    53769 1uhe:A (1.55) BS01 peptide 4.1.1.11 GO:0004068 ... P56065 15184017
    53770 1uhe:A (1.55) BS02 NSN 4.1.1.11 GO:0004068 ... P56065 15184017
    53771 1uhh:A (1.8) BS01 CZP ? GO:0005509 ... P02592 15632284
    53772 1uhh:B (1.8) BS01 CZP ? GO:0005509 ... P02592 15632284
    53773 1uhi:A (1.8) BS01 CZI ? GO:0005509 ... P02592 15632284
    53774 1uhi:B (1.8) BS01 CZI ? GO:0005509 ... P02592 15632284
    53775 1uhj:A (1.8) BS01 CZB ? GO:0005509 ... P02592 15632284
    53776 1uhj:B (1.8) BS01 CZB ? GO:0005509 ... P02592 15632284
    53777 1uhk:A (1.6) BS01 CZN ? GO:0005509 ... P02592 15632284
    53778 1uhk:B (1.6) BS01 CZN ? GO:0005509 ... P02592 15632284
    53779 1uhl:A (2.9) BS01 peptide ? GO:0003677 ... P28702 12970175
    53780 1uhl:A (2.9) BS02 MEI ? GO:0003677 ... P28702 12970175
    53781 1uhl:B (2.9) BS01 peptide ? GO:0003677 ... Q13133 12970175
    53782 1uhl:B (2.9) BS02 444 ? GO:0003677 ... Q13133 12970175 BindingDB: IC50=13nM, EC50=10nM, Kd=92nM, Ki=24nM
    53783 1uhn:A (2.1) BS01 CA ? GO:0005509 ... Q8LAS7 12871972
    53784 1uhn:A (2.1) BS02 CA ? GO:0005509 ... Q8LAS7 12871972
    53785 1uho:A (2.5) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 12955149
    53786 1uho:A (2.5) BS02 VDN 3.1.4.35 GO:0004114 ... O76074 12955149 MOAD: Kd~0.6nM
    BindingDB: IC50=0.890000nM, Ki=1nM
    53787 1uhv:A (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    53788 1uhv:B (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    53789 1uhv:C (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    53790 1uhv:D (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    53791 1ui0:A (1.5) BS01 SF4 3.2.2.27 GO:0004844 ... Q5SKC5 14556741
    53792 1ui0:A (1.5) BS02 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    53793 1ui0:A (1.5) BS03 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    53794 1ui1:A (2.8) BS01 SF4 3.2.2.27 GO:0004844 ... Q5SKC5 14556741
    53795 1ui7:A (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    53796 1ui7:A (2.0) BS02 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    53797 1ui7:B (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    53798 1ui7:B (2.0) BS02 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    53799 1ui8:A (1.8) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    53800 1ui8:B (1.8) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).