SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2680 2681 2682 2683 2684 2685 2686 2687 2688 2689 2690 2691 2692 2693 2694 2695 2696 2697 2698 2699 2700 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    537801 6qx9:1K (3.28) BS01 rna ? GO:0000398 ... P08621 30975767
    537802 6qx9:1b (3.28) BS01 rna ? GO:0000387 ... P14678 30975767
    537803 6qx9:1e (3.28) BS01 rna ? GO:0000245 ... P62304 30975767
    537804 6qx9:1f (3.28) BS01 rna ? GO:0000387 ... P62306 30975767
    537805 6qx9:1g (3.28) BS01 rna ? GO:0000245 ... P62308 30975767
    537806 6qx9:21 (3.28) BS01 rna ? GO:0000243 ... P62314 30975767
    537807 6qx9:22 (3.28) BS01 rna ? GO:0000245 ... P62316 30975767
    537808 6qx9:23 (3.28) BS01 rna ? GO:0000243 ... P62318 30975767
    537809 6qx9:2A (3.28) BS01 rna ? GO:0000398 ... P09661 30975767
    537810 6qx9:2B (3.28) BS01 rna ? GO:0000398 ... P08579 30975767
    537811 6qx9:2b (3.28) BS01 rna ? GO:0000387 ... P14678 30975767
    537812 6qx9:2e (3.28) BS01 rna ? GO:0000245 ... P62304 30975767
    537813 6qx9:2f (3.28) BS01 rna ? GO:0000387 ... P62306 30975767
    537814 6qx9:2g (3.28) BS01 rna ? GO:0000245 ... P62308 30975767
    537815 6qx9:41 (3.28) BS01 rna ? GO:0000243 ... P62314 30975767
    537816 6qx9:42 (3.28) BS01 rna ? GO:0000245 ... P62316 30975767
    537817 6qx9:43 (3.28) BS01 rna ? GO:0000243 ... P62318 30975767
    537818 6qx9:4A (3.28) BS01 rna ? GO:0000244 ... O43395 30975767
    537819 6qx9:4A (3.28) BS02 rna ? GO:0000244 ... O43395 30975767
    537820 6qx9:4C (3.28) BS01 rna ? GO:0000244 ... Q8WWY3 30975767
    537821 6qx9:4C (3.28) BS02 rna ? GO:0000244 ... Q8WWY3 30975767
    537822 6qx9:4D (3.28) BS01 rna ? GO:0000398 ... P55769 30975767
    537823 6qx9:4D (3.28) BS02 rna ? GO:0000398 ... P55769 30975767
    537824 6qx9:4b (3.28) BS01 rna ? GO:0000387 ... P14678 30975767
    537825 6qx9:4e (3.28) BS01 rna ? GO:0000245 ... P62304 30975767
    537826 6qx9:4f (3.28) BS01 rna ? GO:0000387 ... P62306 30975767
    537827 6qx9:4g (3.28) BS01 rna ? GO:0000245 ... P62308 30975767
    537828 6qx9:51 (3.28) BS01 rna ? GO:0000243 ... P62314 30975767
    537829 6qx9:52 (3.28) BS01 rna ? GO:0000245 ... P62316 30975767
    537830 6qx9:53 (3.28) BS01 rna ? GO:0000243 ... P62318 30975767
    537831 6qx9:5A (3.28) BS01 rna ? GO:0000244 ... Q6P2Q9 30975767
    537832 6qx9:5A (3.28) BS02 rna ? GO:0000244 ... Q6P2Q9 30975767
    537833 6qx9:5A (3.28) BS03 rna ? GO:0000244 ... Q6P2Q9 30975767
    537834 6qx9:5A (3.28) BS04 IHP ? GO:0000244 ... Q6P2Q9 30975767
    537835 6qx9:5C (3.28) BS01 MG ? GO:0003924 ... Q15029 30975767
    537836 6qx9:5C (3.28) BS02 GTP ? GO:0003924 ... Q15029 30975767
    537837 6qx9:5D (3.28) BS01 rna ? GO:0000245 ... P83876 30975767
    537838 6qx9:5J (3.28) BS01 rna ? GO:0000398 ... O94906 30975767
    537839 6qx9:5J (3.28) BS02 rna ? GO:0000398 ... O94906 30975767
    537840 6qx9:5O (3.28) BS01 rna ? GO:0000375 ... Q96DI7 30975767
    537841 6qx9:5X (3.28) BS01 rna 3.6.4.13 GO:0000354 ... Q9BUQ8 30975767
    537842 6qx9:5X (3.28) BS02 rna 3.6.4.13 GO:0000354 ... Q9BUQ8 30975767
    537843 6qx9:5b (3.28) BS01 rna ? GO:0000387 ... P14678 30975767
    537844 6qx9:5e (3.28) BS01 rna ? GO:0000245 ... P62304 30975767
    537845 6qx9:5f (3.28) BS01 rna ? GO:0000387 ... P62306 30975767
    537846 6qx9:5g (3.28) BS01 rna ? GO:0000245 ... P62308 30975767
    537847 6qx9:62 (3.28) BS01 rna ? GO:0000244 ... Q9Y333 30975767
    537848 6qx9:63 (3.28) BS01 rna ? GO:0000398 ... P62310 30975767
    537849 6qx9:64 (3.28) BS01 rna ? GO:0000387 ... Q9Y4Z0 30975767
    537850 6qx9:66 (3.28) BS01 rna ? GO:0000398 ... P62312 30975767
    537851 6qx9:68 (3.28) BS01 rna ? GO:0000398 ... O95777 30975767
    537852 6qx9:A2 (3.28) BS01 rna ? GO:0003676 ... Q15428 30975767
    537853 6qx9:A2 (3.28) BS02 rna ? GO:0003676 ... Q15428 30975767
    537854 6qx9:A2 (3.28) BS03 ZN ? GO:0003676 ... Q15428 30975767
    537855 6qx9:A3 (3.28) BS01 rna ? GO:0000375 ... Q12874 30975767
    537856 6qx9:B1 (3.28) BS01 rna ? GO:0000245 ... O75533 30975767
    537857 6qx9:B1 (3.28) BS02 rna ? GO:0000245 ... O75533 30975767
    537858 6qx9:B2 (3.28) BS01 rna ? GO:0000398 ... Q13435 30975767
    537859 6qx9:BP (3.28) BS01 rna ? GO:0000398 ... Q7RTV0 30975767
    537860 6qx9:BP (3.28) BS02 rna ? GO:0000398 ... Q7RTV0 30975767
    537861 6qx9:BP (3.28) BS03 ZN ? GO:0000398 ... Q7RTV0 30975767
    537862 6qx9:BP (3.28) BS04 ZN ? GO:0000398 ... Q7RTV0 30975767
    537863 6qx9:BP (3.28) BS05 ZN ? GO:0000398 ... Q7RTV0 30975767
    537864 6qx9:K (3.28) BS01 rna 2.7.11.1 GO:0000244 ... Q13523 30975767
    537865 6qx9:K (3.28) BS02 rna 2.7.11.1 GO:0000244 ... Q13523 30975767
    537866 6qx9:R (3.28) BS01 rna ? GO:0000398 ... Q9BTD8 30975767
    537867 6qx9:R (3.28) BS02 rna ? GO:0000398 ... Q9BTD8 30975767
    537868 6qx9:S (3.28) BS01 rna ? GO:0000387 ... O43290 30975767
    537869 6qx9:U (3.28) BS01 ZN 3.4.19.12 GO:0000245 ... Q53GS9 30975767
    537870 6qx9:X (3.28) BS01 rna ? GO:0000398 ... Q8WVK2 30975767
    537871 6qxa:A (3.41) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537872 6qxa:A (3.41) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537873 6qxa:A (3.41) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537874 6qxa:A (3.41) BS04 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537875 6qxa:A (3.41) BS05 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537876 6qxa:A (3.41) BS06 2PN 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537877 6qxa:A (3.41) BS07 NA 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537878 6qxa:A (3.41) BS08 GQB 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537879 6qxa:A (3.41) BS09 GQB 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537880 6qxa:B (3.41) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537881 6qxa:B (3.41) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537882 6qxa:B (3.41) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537883 6qxa:B (3.41) BS04 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537884 6qxa:B (3.41) BS05 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537885 6qxa:B (3.41) BS06 2PN 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537886 6qxa:B (3.41) BS07 NA 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537887 6qxa:C (3.41) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537888 6qxa:C (3.41) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537889 6qxa:C (3.41) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537890 6qxa:C (3.41) BS04 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537891 6qxa:C (3.41) BS05 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537892 6qxa:C (3.41) BS06 2PN 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537893 6qxa:D (3.41) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537894 6qxa:D (3.41) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537895 6qxa:D (3.41) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537896 6qxa:D (3.41) BS04 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537897 6qxa:D (3.41) BS05 MG 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537898 6qxa:D (3.41) BS06 2PN 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537899 6qxa:D (3.41) BS07 NA 7.2.3.1 GO:0000287 ... Q9S5X0 31131322
    537900 6qxd:A (2.317) BS01 CU ? GO:0016491 ... B2ZB02 31202126
    537901 6qxd:A (2.317) BS02 CU ? GO:0016491 ... B2ZB02 31202126
    537902 6qxd:A (2.317) BS03 JKB ? GO:0016491 ... B2ZB02 31202126 MOAD: ic50=0.96uM
    537903 6qxd:B (2.317) BS01 CU ? GO:0016491 ... B2ZB02 31202126
    537904 6qxd:B (2.317) BS02 CU ? GO:0016491 ... B2ZB02 31202126
    537905 6qxe:A (4.15) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537906 6qxe:B (4.15) BS01 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    537907 6qxe:E (4.15) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    537908 6qxe:F (4.15) BS01 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    537909 6qxf:A (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537910 6qxf:A (3.6) BS02 CA ? GO:0003677 ... G3ECR4 31080012
    537911 6qxf:B (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537912 6qxf:C (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537913 6qxf:D (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537914 6qxf:E (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537915 6qxf:F (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537916 6qxf:G (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537917 6qxf:H (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    537918 6qxf:J (3.6) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537919 6qxf:M (3.6) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537920 6qxf:P (3.6) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537921 6qxf:S (3.6) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537922 6qxg:A (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    537923 6qxg:A (2.08) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    537924 6qxg:B (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    537925 6qxg:B (2.08) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    537926 6qxg:C (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    537927 6qxh:A (2.04) BS01 UMP 2.1.1.45 GO:0000900 ... P04818 30935102
    537928 6qxh:A (2.04) BS02 UMP 2.1.1.45 GO:0000900 ... P04818 30935102
    537929 6qxh:B (2.04) BS01 UMP 2.1.1.45 GO:0000900 ... P04818 30935102
    537930 6qxh:B (2.04) BS02 UMP 2.1.1.45 GO:0000900 ... P04818 30935102
    537931 6qxh:C (2.04) BS01 UMP 2.1.1.45 GO:0000900 ... P04818 30935102
    537932 6qxj:A (1.7) BS01 GLC ? GO:0005515 ... P0AEX9
    Q07820
    31339316
    537933 6qxj:A (1.7) BS02 GLC ? GO:0005515 ... P0AEX9
    Q07820
    31339316
    537934 6qxj:A (1.7) BS03 JKQ ? GO:0005515 ... P0AEX9
    Q07820
    31339316
    537935 6qxk:B (2.1) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 N/A
    537936 6qxk:B (2.1) BS02 JKW 2.7.11.1 GO:0004672 ... P11309 N/A
    537937 6qxl:A (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537938 6qxl:A (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537939 6qxl:B (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537940 6qxl:B (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537941 6qxl:C (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537942 6qxl:C (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537943 6qxl:D (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537944 6qxl:D (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537945 6qxl:E (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537946 6qxl:E (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537947 6qxl:F (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537948 6qxl:F (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537949 6qxl:G (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537950 6qxl:G (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537951 6qxl:H (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537952 6qxl:H (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537953 6qxl:I (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537954 6qxl:I (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537955 6qxl:J (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537956 6qxl:J (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537957 6qxl:K (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537958 6qxl:K (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537959 6qxl:L (2.43) BS01 G6P 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537960 6qxl:L (2.43) BS02 MG 2.7.1.40 GO:0000287 ... Q9HW72 31484721
    537961 6qxn:A (1.849) BS01 CTP 2.7.7.72 GO:0000049 ... A0A1C7DQ98 N/A
    537962 6qxp:E (3.201) BS01 MAN ? N/A O48809 32165538
    537963 6qxq:A (1.45) BS01 COA ? GO:0000287 ... B1MD73 32128972
    537964 6qxq:A (1.45) BS02 MN ? GO:0000287 ... B1MD73 32128972
    537965 6qxr:A (1.2) BS01 COA ? GO:0000287 ... B1MD73 32128972
    537966 6qxr:A (1.2) BS02 MN ? GO:0000287 ... B1MD73 32128972
    537967 6qxr:A (1.2) BS03 CA ? GO:0000287 ... B1MD73 32128972
    537968 6qxs:A (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537969 6qxs:B (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537970 6qxs:B (2.88) BS02 FFO 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537971 6qxs:C (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537972 6qxs:D (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537973 6qxs:D (2.88) BS02 FFO 2.1.1.45 GO:0004799 ... Q834R3 30935102
    537974 6qxu:A (1.2) BS01 JKN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 31381853 MOAD: ic50=7nM
    BindingDB: IC50=10.0nM
    537975 6qxu:A (1.2) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 31381853
    537976 6qxv:A (1.94) BS01 CA 3.4.21.64 GO:0004252 ... P06873 31576225
    537977 6qxv:A (1.94) BS02 CA 3.4.21.64 GO:0004252 ... P06873 31576225
    537978 6qxz:A (-1.00) BS01 peptide 2.1.1.- GO:0008270 ... Q2LAE1 32083791
    537979 6qxz:A (-1.00) BS02 ZN 2.1.1.- GO:0008270 ... Q2LAE1 32083791
    537980 6qy3:J (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537981 6qy3:M (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537982 6qy3:P (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537983 6qy3:S (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537984 6qy3:V (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537985 6qy3:Z (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537986 6qy3:j (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537987 6qy3:m (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537988 6qy3:p (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537989 6qy3:s (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537990 6qy3:v (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537991 6qy3:z (9.1) BS01 peptide 3.1.-.- GO:0003676 ... G3ECR2 31080012
    537992 6qy7:A (2.1) BS01 041 2.7.11.1 GO:0004672 ... P68400 N/A
    537993 6qy7:B (2.1) BS01 041 2.7.11.1 GO:0004672 ... P68400 N/A
    537994 6qy8:A (1.7) BS01 041 2.7.11.1 GO:0000785 ... P19784 N/A
    537995 6qy8:B (1.7) BS01 041 2.7.11.1 GO:0000785 ... P19784 N/A
    537996 6qy8:C (1.7) BS01 041 2.7.11.1 GO:0000785 ... P19784 N/A
    537997 6qy8:D (1.7) BS01 041 2.7.11.1 GO:0000785 ... P19784 N/A
    537998 6qy9:A (1.5) BS01 JL2 2.7.11.1 GO:0000785 ... P19784 N/A
    537999 6qya:A (1.76) BS01 UMP 2.1.1.45 GO:0004799 ... Q834R3 30935102
    538000 6qya:B (1.76) BS01 UMP 2.1.1.45 GO:0004799 ... Q834R3 30935102

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).