SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 2687 2688 2689 2690 2691 2692 2693 2694 2695 2696 2697 2698 2699 2700 2701 2702 2703 2704 2705 2706 2707 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    539201 6r64:B (2.64) BS01 dna 3.1.21.- N/A P24200 31724709
    539202 6r64:B (2.64) BS02 dna 3.1.21.- N/A P24200 31724709
    539203 6r65:A (3.5) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    539204 6r65:A (3.5) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    539205 6r65:A (3.5) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    539206 6r65:B (3.5) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    539207 6r65:B (3.5) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    539208 6r65:B (3.5) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    539209 6r66:A (1.3) BS01 JTN ? N/A P02766 31473362
    539210 6r66:B (1.3) BS01 JTN ? N/A P02766 31473362
    539211 6r67:A (1.3) BS01 JTE ? N/A P02766 31473362
    539212 6r68:A (1.45) BS01 JTK ? N/A P02766 31473362
    539213 6r68:B (1.45) BS01 JTK ? N/A P02766 31473362
    539214 6r6a:A (1.8) BS01 peptide ? GO:0004190 ... J9VS02 34006103
    539215 6r6e:A (2.25) BS01 JTQ 2.7.12.1 GO:0004672 ... P49759 N/A
    539216 6r6f:A (1.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31740053
    539217 6r6f:A (1.2) BS02 EA3 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31740053 BindingDB: Kd=10.0nM
    539218 6r6g:0 (3.7) BS01 rna ? GO:0003735 ... G1SK22 31246176
    539219 6r6g:6 (3.7) BS01 rna ? GO:0001891 ... G1SJB4 31246176
    539220 6r6g:9 (3.7) BS01 rna ? GO:0002181 ... G1U7M4 31246176
    539221 6r6g:A (3.7) BS01 rna ? GO:0002181 ... G1TT27 31246176
    539222 6r6g:A (3.7) BS02 rna ? GO:0002181 ... G1TT27 31246176
    539223 6r6g:AA (3.7) BS01 rna ? GO:0003735 ... G1T8A2 31246176
    539224 6r6g:AB (3.7) BS01 rna 3.6.5.4 GO:0003924 ... P61010 31246176
    539225 6r6g:AB (3.7) BS02 peptide 3.6.5.4 GO:0003924 ... P61010 31246176
    539226 6r6g:AC (3.7) BS01 rna ? GO:0006614 ... J9PAS6 31246176
    539227 6r6g:AD (3.7) BS01 rna N/A GO:0006614 ... N/A 31246176
    539228 6r6g:AE (3.7) BS01 rna ? GO:0005786 ... P16255 31246176
    539229 6r6g:AE (3.7) BS02 rna ? GO:0005786 ... P16255 31246176
    539230 6r6g:AI (3.7) BS01 rna ? GO:0003723 ... Q00004 31246176
    539231 6r6g:B (3.7) BS01 rna ? GO:0003723 ... G1TL06 31246176
    539232 6r6g:BB (3.7) BS01 rna ? GO:0003735 ... G1SVB0 31246176
    539233 6r6g:C (3.7) BS01 rna ? GO:0003735 ... G1SVW5 31246176
    539234 6r6g:C (3.7) BS02 rna ? GO:0003735 ... G1SVW5 31246176
    539235 6r6g:CC (3.7) BS01 rna ? GO:0003735 ... G1TJW1 31246176
    539236 6r6g:CC (3.7) BS02 rna ? GO:0003735 ... G1TJW1 31246176
    539237 6r6g:D (3.7) BS01 rna ? GO:0000027 ... P19949 31246176
    539238 6r6g:D (3.7) BS02 rna ? GO:0000027 ... P19949 31246176
    539239 6r6g:DD (3.7) BS01 rna ? GO:0003723 ... B7NZS8 31246176
    539240 6r6g:E (3.7) BS01 rna ? GO:0003735 ... G1SKF7 31246176
    539241 6r6g:EE (3.7) BS01 rna ? GO:0003735 ... G1TRM4 31246176
    539242 6r6g:F (3.7) BS01 rna ? GO:0000463 ... G1SV32 31246176
    539243 6r6g:F (3.7) BS02 rna ? GO:0000463 ... G1SV32 31246176
    539244 6r6g:FF (3.7) BS01 rna ? GO:0000028 ... G1TIB4 31246176
    539245 6r6g:G (3.7) BS01 rna ? GO:0003723 ... G1STW0 31246176
    539246 6r6g:G (3.7) BS02 rna ? GO:0003723 ... G1STW0 31246176
    539247 6r6g:GG (3.7) BS01 rna N/A GO:0003723 ... N/A 31246176
    539248 6r6g:H (3.7) BS01 rna ? GO:0002181 ... G1SWI6 31246176
    539249 6r6g:I (3.7) BS01 rna ? GO:0003735 ... B7NZQ2 31246176
    539250 6r6g:I (3.7) BS02 rna ? GO:0003735 ... B7NZQ2 31246176
    539251 6r6g:II (3.7) BS01 rna ? GO:0003676 ... G1TPG3 31246176
    539252 6r6g:J (3.7) BS01 rna ? GO:0003735 ... G1TUB8 31246176
    539253 6r6g:J (3.7) BS02 rna ? GO:0003735 ... G1TUB8 31246176
    539254 6r6g:J (3.7) BS03 rna ? GO:0003735 ... G1TUB8 31246176
    539255 6r6g:JJ (3.7) BS01 rna ? GO:0003735 ... G1TZ76 31246176
    539256 6r6g:KK (3.7) BS01 rna ? GO:0003735 ... G1TU13 31246176
    539257 6r6g:L (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539258 6r6g:L (3.7) BS02 rna N/A GO:0003735 ... N/A 31246176
    539259 6r6g:LL (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539260 6r6g:M (3.7) BS01 rna ? GO:0003723 ... G1SZ12 31246176
    539261 6r6g:MM (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539262 6r6g:N (3.7) BS01 rna ? GO:0002181 ... G1T0C1 31246176
    539263 6r6g:N (3.7) BS02 rna ? GO:0002181 ... G1T0C1 31246176
    539264 6r6g:NN (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539265 6r6g:O (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539266 6r6g:OO (3.7) BS01 rna ? N/A G1TDB3 31246176
    539267 6r6g:P (3.7) BS01 peptide ? GO:0003735 ... G1SCJ6 31246176
    539268 6r6g:P (3.7) BS02 rna ? GO:0003735 ... G1SCJ6 31246176
    539269 6r6g:P (3.7) BS03 rna ? GO:0003735 ... G1SCJ6 31246176
    539270 6r6g:PP (3.7) BS01 rna ? GO:0000028 ... G1TN62 31246176
    539271 6r6g:Q (3.7) BS01 rna ? GO:0003723 ... G1TX70 31246176
    539272 6r6g:QQ (3.7) BS01 rna ? GO:0003735 ... G1SP51 31246176
    539273 6r6g:R (3.7) BS01 rna N/A GO:0003723 ... N/A 31246176
    539274 6r6g:R (3.7) BS02 rna N/A GO:0003723 ... N/A 31246176
    539275 6r6g:RR (3.7) BS01 rna ? GO:0003735 ... G1SFR8 31246176
    539276 6r6g:S (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539277 6r6g:S (3.7) BS02 rna N/A GO:0003735 ... N/A 31246176
    539278 6r6g:SS (3.7) BS01 rna ? N/A G1TPV3 31246176
    539279 6r6g:T (3.7) BS01 rna ? GO:0003735 ... G1SHQ2 31246176
    539280 6r6g:T (3.7) BS02 rna ? GO:0003735 ... G1SHQ2 31246176
    539281 6r6g:TT (3.7) BS01 rna ? GO:0003735 ... G1TG89 31246176
    539282 6r6g:U (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539283 6r6g:UU (3.7) BS01 rna ? GO:0000462 ... G1SGX4 31246176
    539284 6r6g:V (3.7) BS01 rna ? GO:0003735 ... G1T6D1 31246176
    539285 6r6g:VV (3.7) BS01 rna ? GO:0003735 ... G1SZ47 31246176
    539286 6r6g:W (3.7) BS01 rna ? GO:0003735 ... G1SE28 31246176
    539287 6r6g:WW (3.7) BS01 rna ? GO:0003723 ... G1U0Q2 31246176
    539288 6r6g:X (3.7) BS01 rna ? GO:0003735 ... G1SE76 31246176
    539289 6r6g:X (3.7) BS02 rna ? GO:0003735 ... G1SE76 31246176
    539290 6r6g:Y (3.7) BS01 rna ? GO:0003723 ... G1SQH0 31246176
    539291 6r6g:Y (3.7) BS02 rna ? GO:0003723 ... G1SQH0 31246176
    539292 6r6g:Z (3.7) BS01 rna ? GO:0003735 ... G1TXF6 31246176
    539293 6r6g:a (3.7) BS01 rna ? GO:0003735 ... G1SNY0 31246176
    539294 6r6g:b (3.7) BS01 rna ? GO:0003735 ... G1SGR6 31246176
    539295 6r6g:c (3.7) BS01 rna ? GO:0003723 ... G1TDL2 31246176
    539296 6r6g:d (3.7) BS01 rna ? GO:0003735 ... G1SHG0 31246176
    539297 6r6g:e (3.7) BS01 rna ? GO:0003735 ... G1TUN8 31246176
    539298 6r6g:f (3.7) BS01 rna ? GO:0000049 ... G1SF08 31246176
    539299 6r6g:g (3.7) BS01 rna ? GO:0003735 ... G1TXG5 31246176
    539300 6r6g:g (3.7) BS02 ZN ? GO:0003735 ... G1TXG5 31246176
    539301 6r6g:h (3.7) BS01 rna ? GO:0000463 ... G1SIT5 31246176
    539302 6r6g:h (3.7) BS02 rna ? GO:0000463 ... G1SIT5 31246176
    539303 6r6g:i (3.7) BS01 rna ? GO:0003735 ... G1TTQ5 31246176
    539304 6r6g:j (3.7) BS01 rna ? GO:0003735 ... U3KPD5 31246176
    539305 6r6g:j (3.7) BS02 rna ? GO:0003735 ... U3KPD5 31246176
    539306 6r6g:j (3.7) BS03 ZN ? GO:0003735 ... U3KPD5 31246176
    539307 6r6g:j (3.7) BS04 MG ? GO:0003735 ... U3KPD5 31246176
    539308 6r6g:k (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539309 6r6g:l (3.7) BS01 rna ? GO:0003735 ... G1TTN1 31246176
    539310 6r6g:l (3.7) BS02 rna ? GO:0003735 ... G1TTN1 31246176
    539311 6r6g:m (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539312 6r6g:m (3.7) BS02 ZN N/A GO:0003735 ... N/A 31246176
    539313 6r6g:o (3.7) BS01 rna ? GO:0003735 ... G1T040 31246176
    539314 6r6g:o (3.7) BS02 rna ? GO:0003735 ... G1T040 31246176
    539315 6r6g:o (3.7) BS03 rna ? GO:0003735 ... G1T040 31246176
    539316 6r6g:p (3.7) BS01 rna ? GO:0003735 ... G1SY53 31246176
    539317 6r6g:p (3.7) BS02 ZN ? GO:0003735 ... G1SY53 31246176
    539318 6r6g:q (3.7) BS01 rna N/A GO:0003735 ... N/A 31246176
    539319 6r6g:r (3.7) BS01 rna ? GO:0003735 ... G1U7L1 31246176
    539320 6r6g:s (3.7) BS01 rna N/A N/A N/A 31246176
    539321 6r6g:s (3.7) BS02 rna N/A N/A N/A 31246176
    539322 6r6g:t (3.7) BS01 rna ? GO:0003723 ... G1SMR7 31246176
    539323 6r6g:u (3.7) BS01 rna ? GO:0003735 ... G1SS70 31246176
    539324 6r6g:v (3.7) BS01 rna N/A GO:0003723 ... N/A 31246176
    539325 6r6g:w (3.7) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 31246176
    539326 6r6g:x (3.7) BS01 rna ? GO:0003723 ... G1TK17 31246176
    539327 6r6g:y (3.7) BS01 rna ? GO:0003723 ... G1TFM5 31246176
    539328 6r6g:y (3.7) BS02 rna ? GO:0003723 ... G1TFM5 31246176
    539329 6r6g:z (3.7) BS01 rna ? GO:0003735 ... G1TM55 31246176
    539330 6r6h:E (8.4) BS01 ZN 3.4.-.- GO:0000338 ... Q92905 31444342
    539331 6r6i:A (1.467) BS01 H50 ? N/A P02766 31473362
    539332 6r6i:B (1.467) BS01 H50 ? N/A P02766 31473362
    539333 6r6j:A (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31740053
    539334 6r6j:A (1.55) BS02 JTW 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31740053 MOAD: Kd=0.12nM
    BindingDB: Kd=0.120000nM
    539335 6r6m:A (1.7) BS01 HEC ? GO:0005506 ... Q1Q7P4 31548310
    539336 6r6m:B (1.7) BS01 HEC ? GO:0009055 ... Q1Q7P3 31548310
    539337 6r6n:A (2.0) BS01 HEC ? GO:0005506 ... Q1Q7P4 31548310
    539338 6r6n:B (2.0) BS01 HEC ? GO:0005506 ... Q1Q7P3 31548310
    539339 6r6o:A (1.9) BS01 HEC ? GO:0005506 ... Q1Q7P4 31548310
    539340 6r6o:B (1.9) BS01 HEC ? GO:0009055 ... Q1Q7P3 31548310
    539341 6r6p:0 (3.1) BS01 rna ? GO:0003735 ... G1SK22 31246176
    539342 6r6p:6 (3.1) BS01 rna ? GO:0001891 ... G1SJB4 31246176
    539343 6r6p:9 (3.1) BS01 rna ? GO:0003723 ... G1U0Q2 31246176
    539344 6r6p:A (3.1) BS01 rna ? GO:0002181 ... G1TT27 31246176
    539345 6r6p:A (3.1) BS02 rna ? GO:0002181 ... G1TT27 31246176
    539346 6r6p:AA (3.1) BS01 rna ? GO:0003735 ... G1T8A2 31246176
    539347 6r6p:B (3.1) BS01 rna ? GO:0003723 ... G1TL06 31246176
    539348 6r6p:BB (3.1) BS01 rna ? GO:0003723 ... G1TFM5 31246176
    539349 6r6p:C (3.1) BS01 rna ? GO:0003735 ... G1SVW5 31246176
    539350 6r6p:C (3.1) BS02 rna ? GO:0003735 ... G1SVW5 31246176
    539351 6r6p:C (3.1) BS03 peptide ? GO:0003735 ... G1SVW5 31246176
    539352 6r6p:CC (3.1) BS01 rna ? GO:0003735 ... G1TJW1 31246176
    539353 6r6p:CC (3.1) BS02 rna ? GO:0003735 ... G1TJW1 31246176
    539354 6r6p:D (3.1) BS01 rna ? GO:0000027 ... P19949 31246176
    539355 6r6p:D (3.1) BS02 rna ? GO:0000027 ... P19949 31246176
    539356 6r6p:DD (3.1) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 31246176
    539357 6r6p:E (3.1) BS01 rna ? GO:0003735 ... G1TG04 31246176
    539358 6r6p:EE (3.1) BS01 rna ? GO:0003735 ... G1TRM4 31246176
    539359 6r6p:F (3.1) BS01 rna ? GO:0000463 ... G1SV32 31246176
    539360 6r6p:F (3.1) BS02 rna ? GO:0000463 ... G1SV32 31246176
    539361 6r6p:FF (3.1) BS01 rna ? GO:0000028 ... G1TIB4 31246176
    539362 6r6p:G (3.1) BS01 rna ? GO:0003723 ... G1STW0 31246176
    539363 6r6p:G (3.1) BS02 rna ? GO:0003723 ... G1STW0 31246176
    539364 6r6p:GG (3.1) BS01 rna N/A GO:0003723 ... N/A 31246176
    539365 6r6p:H (3.1) BS01 rna ? GO:0002181 ... G1SWI6 31246176
    539366 6r6p:I (3.1) BS01 rna ? GO:0003735 ... B7NZQ2 31246176
    539367 6r6p:I (3.1) BS02 rna ? GO:0003735 ... B7NZQ2 31246176
    539368 6r6p:I (3.1) BS03 rna ? GO:0003735 ... B7NZQ2 31246176
    539369 6r6p:II (3.1) BS01 rna ? GO:0003676 ... G1TPG3 31246176
    539370 6r6p:J (3.1) BS01 rna ? GO:0003735 ... G1TUB8 31246176
    539371 6r6p:J (3.1) BS02 rna ? GO:0003735 ... G1TUB8 31246176
    539372 6r6p:JJ (3.1) BS01 rna ? GO:0003735 ... G1TZ76 31246176
    539373 6r6p:L (3.1) BS01 rna N/A GO:0003735 ... N/A 31246176
    539374 6r6p:L (3.1) BS02 rna N/A GO:0003735 ... N/A 31246176
    539375 6r6p:M (3.1) BS01 rna ? GO:0003723 ... G1SZ12 31246176
    539376 6r6p:MM (3.1) BS01 rna N/A GO:0003735 ... N/A 31246176
    539377 6r6p:N (3.1) BS01 rna ? GO:0002181 ... G1T0C1 31246176
    539378 6r6p:N (3.1) BS02 rna ? GO:0002181 ... G1T0C1 31246176
    539379 6r6p:NN (3.1) BS01 rna N/A GO:0003735 ... N/A 31246176
    539380 6r6p:O (3.1) BS01 rna N/A GO:0003735 ... N/A 31246176
    539381 6r6p:OO (3.1) BS01 rna ? N/A G1TDB3 31246176
    539382 6r6p:P (3.1) BS01 rna ? GO:0003735 ... G1SCJ6 31246176
    539383 6r6p:P (3.1) BS02 rna ? GO:0003735 ... G1SCJ6 31246176
    539384 6r6p:P (3.1) BS03 peptide ? GO:0003735 ... G1SCJ6 31246176
    539385 6r6p:PP (3.1) BS01 rna ? GO:0000028 ... G1TN62 31246176
    539386 6r6p:Q (3.1) BS01 rna ? GO:0003723 ... G1TX70 31246176
    539387 6r6p:QQ (3.1) BS01 rna ? GO:0003735 ... G1SP51 31246176
    539388 6r6p:QQ (3.1) BS02 rna ? GO:0003735 ... G1SP51 31246176
    539389 6r6p:R (3.1) BS01 rna N/A GO:0003723 ... N/A 31246176
    539390 6r6p:R (3.1) BS02 rna N/A GO:0003723 ... N/A 31246176
    539391 6r6p:RR (3.1) BS01 rna ? GO:0003735 ... G1SFR8 31246176
    539392 6r6p:S (3.1) BS01 rna N/A GO:0003735 ... N/A 31246176
    539393 6r6p:S (3.1) BS02 rna N/A GO:0003735 ... N/A 31246176
    539394 6r6p:SS (3.1) BS01 rna ? N/A G1TPV3 31246176
    539395 6r6p:T (3.1) BS01 rna ? GO:0003735 ... G1SHQ2 31246176
    539396 6r6p:T (3.1) BS02 rna ? GO:0003735 ... G1SHQ2 31246176
    539397 6r6p:TT (3.1) BS01 rna ? GO:0003735 ... G1TG89 31246176
    539398 6r6p:U (3.1) BS01 rna ? GO:0003735 ... G1TSG1 31246176
    539399 6r6p:UU (3.1) BS01 rna ? GO:0000462 ... G1SGX4 31246176
    539400 6r6p:V (3.1) BS01 rna ? GO:0003735 ... G1T6D1 31246176

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).