SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    540601 6rdx:T (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540602 6rdx:U (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540603 6rdx:V (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540604 6rdx:V (3.9) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540605 6rdx:X (3.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540606 6rdx:X (3.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540607 6rdx:Y (3.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540608 6rdx:Y (3.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540609 6rdy:T (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540610 6rdy:U (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540611 6rdy:V (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540612 6rdy:V (3.6) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540613 6rdy:X (3.6) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540614 6rdy:X (3.6) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540615 6rdy:Y (3.6) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540616 6rdy:Y (3.6) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540617 6rdz:M (3.5) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540618 6rdz:T (3.5) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540619 6rdz:U (3.5) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540620 6rdz:V (3.5) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540621 6rdz:Y (3.5) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540622 6rdz:Y (3.5) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540623 6rdz:Z (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540624 6rdz:Z (3.5) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540625 6rdz:Z (3.5) BS03 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540626 6re0:M (3.6) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540627 6re0:T (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540628 6re0:U (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540629 6re0:V (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540630 6re0:Y (3.6) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540631 6re0:Y (3.6) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540632 6re0:Z (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540633 6re0:Z (3.6) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540634 6re0:Z (3.6) BS03 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540635 6re1:T (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540636 6re1:U (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540637 6re1:V (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540638 6re1:Y (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540639 6re1:Y (3.2) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540640 6re1:Z (3.2) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540641 6re1:Z (3.2) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540642 6re1:Z (3.2) BS03 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540643 6re2:T (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540644 6re2:U (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540645 6re2:V (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540646 6re2:Y (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540647 6re2:Z (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540648 6re2:Z (3.2) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540649 6re3:T (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540650 6re3:U (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540651 6re3:V (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540652 6re3:Y (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540653 6re3:Z (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540654 6re3:Z (3.3) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540655 6re4:T (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540656 6re4:U (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540657 6re4:V (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540658 6re4:Y (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540659 6re4:Z (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540660 6re4:Z (3.0) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540661 6re5:T (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540662 6re5:U (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540663 6re5:U (3.2) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540664 6re5:V (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540665 6re5:V (3.2) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540666 6re5:Y (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540667 6re5:Y (3.2) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540668 6re5:Z (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540669 6re5:Z (3.2) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540670 6re6:T (3.4) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540671 6re6:U (3.4) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540672 6re6:U (3.4) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540673 6re6:V (3.4) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540674 6re6:V (3.4) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540675 6re6:Y (3.4) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540676 6re6:Y (3.4) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540677 6re6:Z (3.4) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540678 6re6:Z (3.4) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540679 6re7:T (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540680 6re7:U (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540681 6re7:U (3.1) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540682 6re7:V (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540683 6re7:V (3.1) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540684 6re7:Y (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540685 6re7:Y (3.1) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540686 6re7:Z (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540687 6re7:Z (3.1) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540688 6re8:M (3.8) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540689 6re8:T (3.8) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540690 6re8:T (3.8) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540691 6re8:U (3.8) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540692 6re8:V (3.8) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540693 6re8:X (3.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540694 6re8:Y (3.8) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540695 6re8:Y (3.8) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540696 6re8:Z (3.8) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540697 6re8:Z (3.8) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540698 6re9:M (3.9) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540699 6re9:T (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540700 6re9:T (3.9) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540701 6re9:U (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540702 6re9:V (3.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540703 6re9:X (3.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540704 6re9:Y (3.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540705 6re9:Y (3.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540706 6re9:Z (3.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540707 6re9:Z (3.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540708 6rea:T (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540709 6rea:T (3.6) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540710 6rea:U (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540711 6rea:V (3.6) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540712 6rea:X (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540713 6rea:Y (3.6) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540714 6rea:Y (3.6) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540715 6rea:Z (3.6) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540716 6rea:Z (3.6) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540717 6reb:M (3.2) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540718 6reb:T (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540719 6reb:U (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540720 6reb:U (3.2) BS02 ADP ? GO:0005524 ... A0ZW40 31221832
    540721 6reb:V (3.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540722 6reb:V (3.2) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540723 6reb:X (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540724 6reb:Z (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540725 6reb:Z (3.2) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540726 6rec:M (3.3) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540727 6rec:T (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540728 6rec:U (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540729 6rec:U (3.3) BS02 ADP ? GO:0005524 ... A0ZW40 31221832
    540730 6rec:V (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540731 6rec:V (3.3) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540732 6rec:X (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540733 6rec:Z (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540734 6rec:Z (3.3) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540735 6red:T (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540736 6red:U (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540737 6red:U (3.0) BS02 ADP ? GO:0005524 ... A0ZW40 31221832
    540738 6red:V (3.0) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540739 6red:V (3.0) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540740 6red:X (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540741 6red:Z (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540742 6red:Z (3.0) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540743 6ree:M (3.1) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540744 6ree:T (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540745 6ree:U (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540746 6ree:V (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540747 6ree:X (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540748 6ree:X (3.1) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540749 6ree:Y (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540750 6ree:Z (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540751 6ree:Z (3.1) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540752 6ref:M (3.3) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540753 6ref:T (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540754 6ref:U (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540755 6ref:V (3.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540756 6ref:X (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540757 6ref:X (3.3) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540758 6ref:Y (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540759 6ref:Z (3.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540760 6ref:Z (3.3) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540761 6rej:A (1.65) BS01 ZN N/A N/A N/A 31321399
    540762 6rej:A (1.65) BS02 ZN N/A N/A N/A 31321399
    540763 6rej:A (1.65) BS03 ZN N/A N/A N/A 31321399
    540764 6rej:A (1.65) BS04 ZN N/A N/A N/A 31321399
    540765 6rek:A (1.1) BS01 CU N/A N/A N/A 31321399
    540766 6rek:A (1.1) BS02 CU N/A N/A N/A 31321399
    540767 6rek:A (1.1) BS03 CU N/A N/A N/A 31321399
    540768 6ren:A (1.3) BS01 ZN N/A N/A N/A 31321399
    540769 6ren:A (1.3) BS02 ZN N/A N/A N/A 31321399
    540770 6ren:A (1.3) BS03 ZN N/A N/A N/A 31321399
    540771 6ren:A (1.3) BS04 ZN N/A N/A N/A 31321399
    540772 6ren:B (1.3) BS01 ZN N/A N/A N/A 31321399
    540773 6ren:B (1.3) BS02 ZN N/A N/A N/A 31321399
    540774 6ren:B (1.3) BS03 ZN N/A N/A N/A 31321399
    540775 6ren:B (1.3) BS04 ZN N/A N/A N/A 31321399
    540776 6rep:M (3.1) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540777 6rep:T (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540778 6rep:U (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540779 6rep:V (3.1) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540780 6rep:V (3.1) BS02 MG ? GO:0005524 ... A0ZW40 31221832
    540781 6rep:X (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540782 6rep:Z (3.1) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540783 6rep:Z (3.1) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540784 6req:A (2.2) BS01 3CP 5.4.99.2 GO:0003824 ... P11653 10387043
    540785 6req:A (2.2) BS02 B12 5.4.99.2 GO:0003824 ... P11653 10387043
    540786 6req:B (2.2) BS01 3CP 5.4.99.2 GO:0003824 ... P11652 10387043
    540787 6req:C (2.2) BS01 3CP 5.4.99.2 GO:0003824 ... P11653 10387043
    540788 6req:C (2.2) BS02 B12 5.4.99.2 GO:0003824 ... P11653 10387043
    540789 6rer:T (2.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540790 6rer:U (2.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540791 6rer:V (2.9) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540792 6rer:X (2.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540793 6rer:X (2.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540794 6rer:Y (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540795 6rer:Z (2.9) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540796 6rer:Z (2.9) BS02 MG 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540797 6res:M (4.3) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540798 6res:T (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540799 6res:U (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540800 6res:U (4.3) BS02 ADP ? GO:0005524 ... A0ZW40 31221832

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).