SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    540801 6res:V (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540802 6res:X (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540803 6res:X (4.3) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540804 6res:Z (4.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540805 6ret:M (4.3) BS01 ZN ? GO:0006754 ... H8PGG3 31221832
    540806 6ret:T (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540807 6ret:U (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540808 6ret:U (4.3) BS02 ADP ? GO:0005524 ... A0ZW40 31221832
    540809 6ret:V (4.3) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540810 6ret:X (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540811 6ret:X (4.3) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540812 6ret:Z (4.3) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540813 6reu:T (4.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540814 6reu:U (4.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540815 6reu:U (4.2) BS02 ADP ? GO:0005524 ... A0ZW40 31221832
    540816 6reu:V (4.2) BS01 ATP ? GO:0005524 ... A0ZW40 31221832
    540817 6reu:X (4.2) BS01 ATP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540818 6reu:X (4.2) BS02 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540819 6reu:Z (4.2) BS01 ADP 7.1.2.2 GO:0005524 ... A0ZW41 31221832
    540820 6rev:A (3.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540821 6rev:B (3.8) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540822 6rev:a (3.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540823 6rev:b (3.8) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540824 6rex:A (2.7) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540825 6rex:A (2.7) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540826 6rex:B (2.7) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540827 6rex:B (2.7) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540828 6rex:C (2.7) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540829 6rex:C (2.7) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540830 6rex:D (2.7) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540831 6rex:D (2.7) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540832 6rex:E (2.7) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540833 6rex:E (2.7) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540834 6rey:c (3.0) BS01 IHP ? GO:0000502 ... Q14997 31473102
    540835 6rey:c (3.0) BS02 K0W ? GO:0000502 ... Q14997 31473102
    540836 6rey:d (3.0) BS01 IHP ? GO:0000502 ... Q14997 31473102
    540837 6rey:d (3.0) BS02 K0W ? GO:0000502 ... Q14997 31473102
    540838 6rez:A (2.6) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540839 6rez:A (2.6) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540840 6rez:B (2.6) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540841 6rez:B (2.6) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540842 6rez:C (2.6) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540843 6rez:C (2.6) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540844 6rez:D (2.6) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540845 6rez:D (2.6) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540846 6rez:E (2.6) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540847 6rez:E (2.6) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540848 6rf0:A (3.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540849 6rf0:A (3.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540850 6rf0:B (3.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540851 6rf0:B (3.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540852 6rf0:C (3.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540853 6rf0:C (3.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540854 6rf0:D (3.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540855 6rf0:D (3.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540856 6rf0:E (3.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540857 6rf0:E (3.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540858 6rf1:A (2.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540859 6rf1:A (2.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540860 6rf1:B (2.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540861 6rf1:B (2.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540862 6rf1:C (2.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540863 6rf1:C (2.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540864 6rf1:D (2.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540865 6rf1:D (2.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540866 6rf1:E (2.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540867 6rf1:E (2.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540868 6rf2:A (4.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540869 6rf2:B (4.2) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540870 6rf2:a (4.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540871 6rf2:b (4.2) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540872 6rf3:A (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540873 6rf3:B (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540874 6rf3:C (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540875 6rf3:D (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540876 6rf3:E (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540877 6rf4:A (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540878 6rf4:A (2.4) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540879 6rf4:B (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540880 6rf4:B (2.4) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540881 6rf4:C (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540882 6rf4:C (2.4) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540883 6rf4:D (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540884 6rf4:D (2.4) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540885 6rf4:E (2.4) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540886 6rf4:E (2.4) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540887 6rf5:A (2.3) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540888 6rf5:A (2.3) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540889 6rf6:A (1.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540890 6rf6:A (1.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540891 6rf7:A (2.6) BS01 RET ? GO:0016020 ... N0DKS8 30989112
    540892 6rf8:A (3.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 31610239
    540893 6rf8:B (3.8) BS01 GDP ? GO:0000226 ... Q6B856 31610239
    540894 6rf8:a (3.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 31610239
    540895 6rf8:b (3.8) BS01 GDP ? GO:0000226 ... Q6B856 31610239
    540896 6rf9:A (1.8) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540897 6rf9:A (1.8) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540898 6rfa:A (2.2) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540899 6rfa:A (2.2) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540900 6rfb:A (2.1) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540901 6rfb:A (2.1) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540902 6rfc:A (2.0) BS01 NA ? GO:0016020 ... N0DKS8 30989112
    540903 6rfc:A (2.0) BS02 RET ? GO:0016020 ... N0DKS8 30989112
    540904 6rfd:A (3.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540905 6rfd:B (3.9) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540906 6rfd:a (3.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 33051979
    540907 6rfd:b (3.9) BS01 GDP ? GO:0000226 ... Q6B856 33051979
    540908 6rfe:A (1.54) BS01 K0Z 2.7.11.1 GO:0004672 ... P68400 32283296 MOAD: ic50=0.28uM
    540909 6rff:A (1.8) BS01 K1B 2.7.11.1 GO:0004672 ... P68400 32283296 MOAD: ic50=0.37uM
    540910 6rfh:A (0.969) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    540911 6rfh:A (0.969) BS02 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    540912 6rfh:A (0.969) BS03 4SO 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: Ki=133nM, IC50=880.0nM, Kd=890nM
    540913 6rfh:A (0.969) BS04 4SO 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: Ki=133nM, IC50=880.0nM, Kd=890nM
    540914 6rfh:A (0.969) BS05 4SO 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: Ki=133nM, IC50=880.0nM, Kd=890nM
    540915 6rfi:A (2.31) BS01 K1H 2.7.11.1 GO:0000287 ... Q9NWZ3 31622099 MOAD: ic50=0.037uM
    BindingDB: IC50=160nM
    540916 6rfi:B (2.31) BS01 K1H 2.7.11.1 GO:0000287 ... Q9NWZ3 31622099 MOAD: ic50=0.037uM
    BindingDB: IC50=160nM
    540917 6rfj:A (2.61) BS01 K1E 2.7.11.1 GO:0000287 ... Q9NWZ3 31622099 BindingDB: IC50=4.0nM
    540918 6rfj:B (2.61) BS01 K1E 2.7.11.1 GO:0000287 ... Q9NWZ3 31622099 BindingDB: IC50=4.0nM
    540919 6rfk:S (1.6) BS01 peptide 3.4.21.22 GO:0004252 ... P00740 N/A
    540920 6rfk:S (1.6) BS02 CA 3.4.21.22 GO:0004252 ... P00740 N/A
    540921 6rfl:A (2.76) BS01 MG N/A GO:0003677 ... N/A 31835032
    540922 6rfl:A (2.76) BS02 ZN N/A GO:0003677 ... N/A 31835032
    540923 6rfl:A (2.76) BS03 ZN N/A GO:0003677 ... N/A 31835032
    540924 6rfl:B (2.76) BS01 ZN N/A GO:0003677 ... N/A 31835032
    540925 6rfl:I (2.76) BS01 rna 2.7.7.6 GO:0003700 ... Q1PIU7 31835032
    540926 6rfl:I (2.76) BS02 ZN 2.7.7.6 GO:0003700 ... Q1PIU7 31835032
    540927 6rfl:K (2.76) BS01 rna N/A GO:0045893 ... N/A 31835032
    540928 6rfl:Y (2.76) BS01 rna N/A GO:0005524 ... N/A 31835032
    540929 6rfn:A (2.29) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 31378593
    540930 6rfn:A (2.29) BS02 K3W 3.1.4.- GO:0004114 ... Q8WQX9 31378593 MOAD: Ki=0.00000079M
    BindingDB: Ki=200nM
    540931 6rfn:B (2.29) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 31378593
    540932 6rfn:B (2.29) BS02 K3W 3.1.4.- GO:0004114 ... Q8WQX9 31378593 MOAD: Ki=0.00000079M
    BindingDB: Ki=200nM
    540933 6rfq:2 (3.3) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540934 6rfq:2 (3.3) BS02 CPL 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540935 6rfq:2 (3.3) BS03 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540936 6rfq:2 (3.3) BS04 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540937 6rfq:4 (3.3) BS01 T7X 7.1.1.2 GO:0003954 ... Q9B6D6 31844670
    540938 6rfq:5 (3.3) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6D3 31844670
    540939 6rfq:5 (3.3) BS02 T7X 7.1.1.2 GO:0005739 ... Q9B6D3 31844670
    540940 6rfq:A (3.3) BS01 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540941 6rfq:A (3.3) BS02 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540942 6rfq:A (3.3) BS03 FES 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540943 6rfq:B (3.3) BS01 SF4 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540944 6rfq:B (3.3) BS02 FMN 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540945 6rfq:C (3.3) BS01 SF4 1.6.99.3 GO:0005739 ... F2Z626 31844670
    540946 6rfq:E (3.3) BS01 NDP ? GO:0005739 ... Q6C7X4 31844670
    540947 6rfq:H (3.3) BS01 FES 1.6.99.3 GO:0016491 ... F2Z6C0 31844670
    540948 6rfq:I (3.3) BS01 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540949 6rfq:I (3.3) BS02 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540950 6rfq:J (3.3) BS01 LMN ? GO:0005739 ... Q6C674 31844670
    540951 6rfq:K (3.3) BS01 SF4 1.6.99.3 GO:0008137 ... Q6C2Q1 31844670
    540952 6rfq:O (3.3) BS01 ZMP ? GO:0000035 ... Q6C926 31844670
    540953 6rfq:P (3.3) BS01 ZMP ? GO:0005739 ... Q6CI60 31844670
    540954 6rfq:Q (3.3) BS01 ZMP ? GO:0000035 ... Q6C7X2 31844670
    540955 6rfq:R (3.3) BS01 ZMP ? GO:0005739 ... Q6C9Z1 31844670
    540956 6rfq:b (3.3) BS01 T7X ? N/A A0A1D8NGI5 31844670
    540957 6rfr:1 (3.2) BS01 UQ9 7.1.1.2 GO:0003954 ... Q9B6E8 31844670
    540958 6rfr:2 (3.2) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540959 6rfr:2 (3.2) BS02 CPL 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540960 6rfr:2 (3.2) BS03 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 31844670
    540961 6rfr:3 (3.2) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6C7 31844670
    540962 6rfr:4 (3.2) BS01 LMN 7.1.1.2 GO:0003954 ... Q9B6D6 31844670
    540963 6rfr:4 (3.2) BS02 T7X 7.1.1.2 GO:0003954 ... Q9B6D6 31844670
    540964 6rfr:5 (3.2) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6D3 31844670
    540965 6rfr:5 (3.2) BS02 T7X 7.1.1.2 GO:0005739 ... Q9B6D3 31844670
    540966 6rfr:A (3.2) BS01 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540967 6rfr:A (3.2) BS02 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540968 6rfr:A (3.2) BS03 FES 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540969 6rfr:B (3.2) BS01 SF4 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540970 6rfr:B (3.2) BS02 FMN 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540971 6rfr:C (3.2) BS01 SF4 1.6.99.3 GO:0005739 ... F2Z626 31844670
    540972 6rfr:E (3.2) BS01 NDP ? GO:0005739 ... Q6C7X4 31844670
    540973 6rfr:H (3.2) BS01 FES 1.6.99.3 GO:0016491 ... F2Z6C0 31844670
    540974 6rfr:I (3.2) BS01 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540975 6rfr:I (3.2) BS02 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540976 6rfr:J (3.2) BS01 LMN ? GO:0005739 ... Q6C674 31844670
    540977 6rfr:K (3.2) BS01 SF4 1.6.99.3 GO:0008137 ... Q6C2Q1 31844670
    540978 6rfr:K (3.2) BS02 T7X 1.6.99.3 GO:0008137 ... Q6C2Q1 31844670
    540979 6rfr:M (3.2) BS01 ZN ? GO:0005739 ... Q6C8J9 31844670
    540980 6rfr:O (3.2) BS01 ZMP ? GO:0000035 ... Q6C926 31844670
    540981 6rfr:P (3.2) BS01 ZMP ? GO:0005739 ... Q6CI60 31844670
    540982 6rfr:Q (3.2) BS01 ZMP ? GO:0000035 ... Q6C7X2 31844670
    540983 6rfr:R (3.2) BS01 ZMP ? GO:0005739 ... Q6C9Z1 31844670
    540984 6rfr:b (3.2) BS01 T7X ? N/A A0A1D8NGI5 31844670
    540985 6rfr:j (3.2) BS01 LMN 1.6.99.3 GO:0016020 ... B5RSK9 31844670
    540986 6rfs:A (4.04) BS01 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540987 6rfs:A (4.04) BS02 SF4 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540988 6rfs:A (4.04) BS03 FES 1.6.99.3 GO:0008137 ... F2Z6F1 31844670
    540989 6rfs:B (4.04) BS01 SF4 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540990 6rfs:B (4.04) BS02 FMN 7.1.1.2 GO:0005739 ... F2Z660 31844670
    540991 6rfs:C (4.04) BS01 SF4 1.6.99.3 GO:0005739 ... F2Z626 31844670
    540992 6rfs:E (4.04) BS01 NDP ? GO:0005739 ... Q6C7X4 31844670
    540993 6rfs:H (4.04) BS01 FES 1.6.99.3 GO:0016491 ... F2Z6C0 31844670
    540994 6rfs:I (4.04) BS01 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540995 6rfs:I (4.04) BS02 SF4 1.6.99.3 GO:0003954 ... F2Z619 31844670
    540996 6rfs:K (4.04) BS01 SF4 1.6.99.3 GO:0008137 ... Q6C2Q1 31844670
    540997 6rfs:M (4.04) BS01 ZN ? GO:0005739 ... Q6C8J9 31844670
    540998 6rfs:O (4.04) BS01 ZMP ? GO:0000035 ... Q6C926 31844670
    540999 6rfs:P (4.04) BS01 ZMP ? GO:0005739 ... Q6CI60 31844670
    541000 6rft:A (2.3) BS01 ACO 2.3.1.- GO:0008080 ... A0A1M9A4M7 31254444

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).