SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    54001 1tzo:H (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54002 1tzo:H (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54003 1tzo:I (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54004 1tzo:I (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54005 1tzo:J (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54006 1tzo:J (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54007 1tzo:K (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54008 1tzo:K (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54009 1tzo:L (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54010 1tzo:L (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54011 1tzo:M (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54012 1tzo:M (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54013 1tzo:O (3.6) BS01 CA ? GO:0005576 ... P13423 15326297
    54014 1tzo:O (3.6) BS02 CA ? GO:0005576 ... P13423 15326297
    54015 1tzs:A (2.35) BS01 peptide 3.4.23.34 GO:0004190 ... P14091 15342244
    54016 1tzy:A (1.9) BS01 PO4 ? GO:0000786 ... P02263 16511091
    54017 1tzy:B (1.9) BS01 PO4 ? GO:0000786 ... P0C1H5 16511091
    54018 1tzy:C (1.9) BS01 PO4 ? GO:0000786 ... P84229 16511091
    54019 1tzy:E (1.9) BS01 PO4 ? GO:0000786 ... P02263 16511091
    54020 1tzz:A (1.86) BS01 MG 4.2.1.81 GO:0000287 ... Q89FH0 N/A
    54021 1tzz:B (1.86) BS01 MG 4.2.1.81 GO:0000287 ... Q89FH0 N/A
    54022 1u00:A (1.95) BS01 peptide ? GO:0005524 ... P0A6Z1 15351650
    54023 1u02:A (1.92) BS01 MG 3.1.3.12 GO:0000287 ... Q9HIW7 16815921
    54024 1u02:A (1.92) BS02 GOL 3.1.3.12 GO:0000287 ... Q9HIW7 16815921
    54025 1u02:A (1.92) BS03 GOL 3.1.3.12 GO:0000287 ... Q9HIW7 16815921
    54026 1u05:A (2.5) BS01 ZN 2.4.2.1
    2.4.2.28
    3.5.4.4
    GO:0004000 ... A0A384KG77 N/A
    54027 1u05:B (2.5) BS01 ZN 2.4.2.1
    2.4.2.28
    3.5.4.4
    GO:0004000 ... A0A384KG77 N/A
    54028 1u06:A (1.49) BS01 AZI ? N/A P07751 15928996
    54029 1u06:A (1.49) BS02 AZI ? N/A P07751 15928996
    54030 1u08:A (2.35) BS01 PLP 2.6.1.88 GO:0005515 ... P77806 15280032
    54031 1u08:B (2.35) BS01 PLP 2.6.1.88 GO:0005515 ... P77806 15280032
    54032 1u0a:A (1.64) BS01 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54033 1u0a:A (1.64) BS02 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54034 1u0a:A (1.64) BS03 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54035 1u0a:A (1.64) BS04 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54036 1u0a:A (1.64) BS05 CA 3.2.1.73 GO:0004553 ... P23904 16483609
    54037 1u0a:A (1.64) BS06 ZN 3.2.1.73 GO:0004553 ... P23904 16483609
    54038 1u0a:B (1.64) BS01 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54039 1u0a:B (1.64) BS02 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54040 1u0a:B (1.64) BS03 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54041 1u0a:B (1.64) BS04 CA 3.2.1.73 GO:0004553 ... P23904 16483609
    54042 1u0a:B (1.64) BS05 ZN 3.2.1.73 GO:0004553 ... P23904 16483609
    54043 1u0a:C (1.64) BS01 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54044 1u0a:C (1.64) BS02 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54045 1u0a:C (1.64) BS03 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54046 1u0a:C (1.64) BS04 ZN 3.2.1.73 GO:0004553 ... P23904 16483609
    54047 1u0a:C (1.64) BS05 CA 3.2.1.73 GO:0004553 ... P23904 16483609
    54048 1u0a:D (1.64) BS01 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54049 1u0a:D (1.64) BS02 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54050 1u0a:D (1.64) BS03 BGC 3.2.1.73 GO:0004553 ... P23904 16483609
    54051 1u0a:D (1.64) BS04 ZN 3.2.1.73 GO:0004553 ... P23904 16483609
    54052 1u0a:D (1.64) BS05 CA 3.2.1.73 GO:0004553 ... P23904 16483609
    54053 1u0b:B (2.3) BS01 rna 6.1.1.16 GO:0000166 ... P21888 15489861
    54054 1u0b:B (2.3) BS02 ZN 6.1.1.16 GO:0000166 ... P21888 15489861
    54055 1u0c:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54056 1u0c:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54057 1u0c:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54058 1u0c:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54059 1u0d:A (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54060 1u0d:A (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54061 1u0d:B (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54062 1u0d:B (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605
    54063 1u0f:A (1.6) BS01 G6P 5.3.1.9 GO:0002639 ... P06745 15342241
    54064 1u0f:A (1.6) BS02 G6Q 5.3.1.9 GO:0002639 ... P06745 15342241
    54065 1u0g:A (1.7) BS01 E4P 5.3.1.9 GO:0002639 ... P06745 15342241
    54066 1u0g:B (1.7) BS01 E4P 5.3.1.9 GO:0002639 ... P06745 15342241
    54067 1u0h:A (2.9) BS01 MG 4.6.1.1 GO:0009190 ... P30803 15591060
    54068 1u0h:A (2.9) BS02 MG 4.6.1.1 GO:0009190 ... P30803 15591060
    54069 1u0h:A (2.9) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 15591060
    54070 1u0h:A (2.9) BS04 ONM 4.6.1.1 GO:0009190 ... P30803 15591060
    54071 1u0h:B (2.9) BS01 ONM 4.6.1.1 GO:0009190 ... P26769 15591060
    54072 1u0h:C (2.9) BS01 MG ? GO:0003924 ... P04896 15591060
    54073 1u0h:C (2.9) BS02 GSP ? GO:0003924 ... P04896 15591060
    54074 1u0j:A (2.1) BS01 ADP 3.6.4.12 GO:0019079 ... P03132 15310852
    54075 1u0l:A (2.8) BS01 ZN 3.6.1.- GO:0000028 ... Q9X242 15331784
    54076 1u0l:A (2.8) BS02 GDP 3.6.1.- GO:0000028 ... Q9X242 15331784
    54077 1u0l:B (2.8) BS01 ZN 3.6.1.- GO:0000028 ... Q9X242 15331784
    54078 1u0l:B (2.8) BS02 GDP 3.6.1.- GO:0000028 ... Q9X242 15331784
    54079 1u0l:C (2.8) BS01 ZN 3.6.1.- GO:0000028 ... Q9X242 15331784
    54080 1u0l:C (2.8) BS02 GDP 3.6.1.- GO:0000028 ... Q9X242 15331784
    54081 1u0w:A (2.0) BS01 STL 2.3.1.74 GO:0009058 ... P30074 15380179
    54082 1u0w:B (2.0) BS01 STL 2.3.1.74 GO:0009058 ... P30074 15380179
    54083 1u0w:C (2.0) BS01 STL 2.3.1.74 GO:0009058 ... P30074 15380179
    54084 1u0w:D (2.0) BS01 STL 2.3.1.74 GO:0009058 ... P30074 15380179
    54085 1u0x:A (1.45) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 15258143
    54086 1u0x:A (1.45) BS02 XE 1.7.6.1 GO:0005576 ... Q94734 15258143
    54087 1u0x:A (1.45) BS03 XE 1.7.6.1 GO:0005576 ... Q94734 15258143
    54088 1u0z:A (1.9) BS01 RDC ? GO:0005524 ... P41148 N/A
    54089 1u0z:B (1.9) BS01 RDC ? GO:0005524 ... P41148 N/A
    54090 1u10:A (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54091 1u10:A (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54092 1u10:B (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54093 1u10:B (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54094 1u10:C (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54095 1u10:C (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54096 1u10:D (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54097 1u10:D (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54098 1u10:E (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54099 1u10:E (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54100 1u10:F (2.4) BS01 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54101 1u10:F (2.4) BS02 ZN 3.4.24.- GO:0000270 ... P0C0T5 15292190
    54102 1u12:A (2.7) BS01 K ? GO:0005221 ... Q98GN8 15550244
    54103 1u12:B (2.7) BS01 K ? GO:0005221 ... Q98GN8 15550244
    54104 1u13:A (2.01) BS01 HEM 1.14.15.36 GO:0004497 ... P9WPP9 N/A
    54105 1u17:A (1.7) BS01 HEM ? GO:0005576 ... Q26239 N/A
    54106 1u17:B (1.7) BS01 HEM ? GO:0005576 ... Q26239 N/A
    54107 1u18:A (1.96) BS01 HEM ? GO:0005576 ... Q26239 N/A
    54108 1u18:A (1.96) BS02 HSM ? GO:0005576 ... Q26239 N/A
    54109 1u18:B (1.96) BS01 HEM ? GO:0005576 ... Q26239 N/A
    54110 1u18:B (1.96) BS02 HSM ? GO:0005576 ... Q26239 N/A
    54111 1u19:A (2.2) BS01 ZN ? GO:0000139 ... P02699 15327956
    54112 1u19:A (2.2) BS02 ZN ? GO:0000139 ... P02699 15327956
    54113 1u19:A (2.2) BS03 ZN ? GO:0000139 ... P02699 15327956
    54114 1u19:A (2.2) BS04 ZN ? GO:0000139 ... P02699 15327956
    54115 1u19:A (2.2) BS05 RET ? GO:0000139 ... P02699 15327956
    54116 1u19:B (2.2) BS01 ZN ? GO:0000139 ... P02699 15327956
    54117 1u19:B (2.2) BS02 ZN ? GO:0000139 ... P02699 15327956
    54118 1u19:B (2.2) BS03 ZN ? GO:0000139 ... P02699 15327956
    54119 1u19:B (2.2) BS04 RET ? GO:0000139 ... P02699 15327956
    54120 1u1b:A (2.0) BS01 PAX 4.6.1.18 GO:0003676 ... P61823 15969595 MOAD: Kd=16nM
    54121 1u1b:B (2.0) BS01 PAX 4.6.1.18 GO:0003676 ... P61823 15969595 MOAD: Kd=16nM
    54122 1u1c:A (2.2) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54123 1u1c:A (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54124 1u1c:A (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54125 1u1c:B (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54126 1u1c:B (2.2) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54127 1u1c:B (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54128 1u1c:C (2.2) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54129 1u1c:C (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54130 1u1c:C (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54131 1u1c:D (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54132 1u1c:D (2.2) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54133 1u1c:D (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54134 1u1c:E (2.2) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54135 1u1c:E (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54136 1u1c:E (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54137 1u1c:F (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54138 1u1c:F (2.2) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54139 1u1c:F (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    54140 1u1d:A (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54141 1u1d:A (2.001) BS02 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54142 1u1d:A (2.001) BS03 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54143 1u1d:B (2.001) BS01 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54144 1u1d:B (2.001) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54145 1u1d:B (2.001) BS03 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54146 1u1d:C (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54147 1u1d:C (2.001) BS02 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54148 1u1d:C (2.001) BS03 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54149 1u1d:D (2.001) BS01 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54150 1u1d:D (2.001) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54151 1u1d:D (2.001) BS03 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54152 1u1d:E (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54153 1u1d:E (2.001) BS02 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54154 1u1d:F (2.001) BS01 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54155 1u1d:F (2.001) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54156 1u1d:F (2.001) BS03 181 2.4.2.3 GO:0003824 ... P12758 15983408
    54157 1u1e:A (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54158 1u1e:A (2.001) BS02 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54159 1u1e:A (2.001) BS03 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54160 1u1e:B (2.001) BS01 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54161 1u1e:B (2.001) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54162 1u1e:B (2.001) BS03 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54163 1u1e:C (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54164 1u1e:C (2.001) BS02 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54165 1u1e:C (2.001) BS03 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54166 1u1e:D (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54167 1u1e:D (2.001) BS02 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54168 1u1e:E (2.001) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54169 1u1e:E (2.001) BS02 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54170 1u1e:E (2.001) BS03 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54171 1u1e:F (2.001) BS01 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54172 1u1e:F (2.001) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54173 1u1e:F (2.001) BS03 182 2.4.2.3 GO:0003824 ... P12758 15983408
    54174 1u1f:A (2.3) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54175 1u1f:A (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54176 1u1f:A (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54177 1u1f:B (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54178 1u1f:B (2.3) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54179 1u1f:B (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54180 1u1f:C (2.3) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54181 1u1f:C (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54182 1u1f:C (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54183 1u1f:D (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54184 1u1f:D (2.3) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54185 1u1f:D (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54186 1u1f:E (2.3) BS01 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54187 1u1f:E (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54188 1u1f:E (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54189 1u1f:F (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54190 1u1f:F (2.3) BS02 PO4 2.4.2.3 GO:0003824 ... P12758 15983408
    54191 1u1f:F (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    54192 1u1g:A (1.95) BS01 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54193 1u1g:B (1.95) BS01 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54194 1u1g:B (1.95) BS02 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54195 1u1g:C (1.95) BS01 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54196 1u1g:C (1.95) BS02 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54197 1u1g:D (1.95) BS01 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54198 1u1g:D (1.95) BS02 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54199 1u1g:E (1.95) BS01 BBB 2.4.2.3 GO:0003824 ... P12758 15983408
    54200 1u1g:E (1.95) BS02 BBB 2.4.2.3 GO:0003824 ... P12758 15983408

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).