SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    542801 6rqx:A (1.68) BS01 peptide 3.4.11.- GO:0001525 ... Q9NZ08 31843903
    542802 6rqx:A (1.68) BS02 ZN 3.4.11.- GO:0001525 ... Q9NZ08 31843903
    542803 6rqy:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542804 6rqy:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542805 6rqz:A (1.53) BS01 KGH 3.2.1.114 GO:0000139 ... Q24451 32605368
    542806 6rqz:A (1.53) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542807 6rr0:A (2.18) BS01 peptide ? N/A P11978 31515872
    542808 6rr0:B (2.18) BS01 peptide ? N/A P11978 31515872
    542809 6rr0:C (2.18) BS01 peptide ? N/A P11978 31515872
    542810 6rr0:D (2.18) BS01 peptide ? N/A P11978 31515872
    542811 6rr0:E (2.18) BS01 peptide ? N/A P11978 31515872
    542812 6rr0:F (2.18) BS01 peptide ? N/A P11978 31515872
    542813 6rr0:G (2.18) BS01 peptide ? N/A P11978 31515872
    542814 6rr1:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542815 6rr1:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542816 6rr2:A (1.991) BS01 KF5 2.7.1.23 GO:0003951 ... Q8Y8D7 32017533
    542817 6rr2:A (1.991) BS02 MTA 2.7.1.23 GO:0003951 ... Q8Y8D7 32017533
    542818 6rr3:A (1.69) BS01 FAD 1.18.1.2 GO:0000166 ... A0A0H3ASL8 31394095
    542819 6rr4:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542820 6rr4:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542821 6rr5:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542822 6rr5:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542823 6rr6:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542824 6rr6:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542825 6rr7:A (3.01) BS01 rna 3.1.-.- GO:0003723 ... P03434 31485076
    542826 6rr7:A (3.01) BS02 rna 3.1.-.- GO:0003723 ... P03434 31485076
    542827 6rr7:B (3.01) BS01 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    542828 6rr7:B (3.01) BS02 rna 2.7.7.48 GO:0000166 ... P03432 31485076
    542829 6rr7:C (3.01) BS01 rna ? GO:0001172 ... P03429 31485076
    542830 6rr7:C (3.01) BS02 rna ? GO:0001172 ... P03429 31485076
    542831 6rr8:A (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542832 6rr8:B (1.9) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 32723869
    542833 6rr9:A (3.432) BS01 ZN ? N/A Q08AF3 35037067
    542834 6rra:A (1.4) BS01 FAD 1.18.1.2 GO:0000166 ... A0A0H3ASL8 31394095
    542835 6rra:A (1.4) BS02 NAP 1.18.1.2 GO:0000166 ... A0A0H3ASL8 31394095
    542836 6rrc:A (2.37) BS01 peptide ? N/A Q8WVM7 32467316
    542837 6rrc:C (2.37) BS01 peptide ? N/A Q8WVM7 32467316
    542838 6rrd:A (3.1) BS01 dna 2.7.7.6 GO:0000428 ... P10964 31804486
    542839 6rrd:B (3.1) BS01 dna 2.7.7.6 GO:0000428 ... P22138 31804486
    542840 6rrd:B (3.1) BS02 dna 2.7.7.6 GO:0000428 ... P22138 31804486
    542841 6rrd:Q (3.1) BS01 dna ? GO:0000120 ... P40992 31804486
    542842 6rrd:Q (3.1) BS02 dna ? GO:0000120 ... P40992 31804486
    542843 6rrd:Q (3.1) BS03 ZN ? GO:0000120 ... P40992 31804486
    542844 6rrd:R (3.1) BS01 dna ? GO:0001164 ... Q04712 31804486
    542845 6rrd:R (3.1) BS02 dna ? GO:0001164 ... Q04712 31804486
    542846 6rre:B (3.586) BS01 MG 3.1.4.- GO:0009405 ... Q5ZSQ2 32853279
    542847 6rre:C (3.586) BS01 MG 3.1.4.- GO:0009405 ... Q5ZSQ2 32853279
    542848 6rre:D (3.586) BS01 MG 3.1.4.- GO:0009405 ... Q5ZSQ2 32853279
    542849 6rrg:A (1.127) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542850 6rrg:A (1.127) BS02 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542851 6rrg:A (1.127) BS03 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542852 6rrg:A (1.127) BS04 GLC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542853 6rrg:A (1.127) BS05 FBU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542854 6rrh:A (2.07) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542855 6rri:A (1.097) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542856 6rri:A (1.097) BS02 KFH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853 BindingDB: Kd=42nM
    542857 6rri:A (1.097) BS03 KFH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853 BindingDB: Kd=42nM
    542858 6rri:A (1.097) BS04 GLC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542859 6rri:A (1.097) BS05 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542860 6rrj:A (1.95) BS01 KFE 3.2.1.114 GO:0000139 ... Q24451 32605368
    542861 6rrj:A (1.95) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542862 6rrk:A (3.17) BS01 peptide ? N/A Q8WVM7 32467316
    542863 6rrk:B (3.17) BS01 peptide ? N/A Q8WVM7 32467316
    542864 6rrm:A (1.64) BS01 9JT 2.3.2.- GO:0005886 ... I6Y9J2 31380528
    542865 6rrm:B (1.64) BS01 9JT 2.3.2.- GO:0005886 ... I6Y9J2 31380528
    542866 6rrn:A (1.59) BS01 KFT 3.2.1.114 GO:0000139 ... Q24451 32605368
    542867 6rrn:A (1.59) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542868 6rrp:A (2.4) BS01 URS ? GO:0002049 ... Q9I188 31899238 MOAD: ic50=174.4uM
    542869 6rrp:A (2.4) BS02 CU ? GO:0002049 ... Q9I188 31899238
    542870 6rrp:A (2.4) BS03 CU ? GO:0002049 ... Q9I188 31899238
    542871 6rrp:B (2.4) BS01 URS ? GO:0002049 ... Q9I188 31899238 MOAD: ic50=174.4uM
    542872 6rrp:B (2.4) BS02 CU ? GO:0002049 ... Q9I188 31899238
    542873 6rrp:B (2.4) BS03 CU ? GO:0002049 ... Q9I188 31899238
    542874 6rrq:A (2.7) BS01 CU ? GO:0002049 ... Q9I188 31899238
    542875 6rrq:A (2.7) BS02 CU ? GO:0002049 ... Q9I188 31899238
    542876 6rrq:B (2.7) BS01 CU ? GO:0002049 ... Q9I188 31899238
    542877 6rrq:B (2.7) BS02 CU ? GO:0002049 ... Q9I188 31899238
    542878 6rru:A (1.9) BS01 KG8 3.2.1.114 GO:0000139 ... Q24451 32605368
    542879 6rru:A (1.9) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542880 6rru:A (1.9) BS03 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542881 6rrw:A (2.15) BS01 KG5 3.2.1.114 GO:0000139 ... Q24451 32605368
    542882 6rrw:A (2.15) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542883 6rrx:A (1.84) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542884 6rrx:A (1.84) BS02 KFW 3.2.1.114 GO:0000139 ... Q24451 32605368
    542885 6rry:A (1.86) BS01 KGE 3.2.1.114 GO:0000139 ... Q24451 32605368
    542886 6rry:A (1.86) BS02 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542887 6rs0:A (1.8) BS01 ZN 3.2.1.114 GO:0000139 ... Q24451 32605368
    542888 6rs0:A (1.8) BS02 KGB 3.2.1.114 GO:0000139 ... Q24451 32605368
    542889 6rs5:A (1.07) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542890 6rs5:A (1.07) BS02 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542891 6rs5:A (1.07) BS03 KGK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542892 6rs5:A (1.07) BS04 KGK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542893 6rs5:A (1.07) BS05 GLC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542894 6rs6:A (1.6) BS01 GLY N/A N/A N/A 31471321
    542895 6rs6:A (1.6) BS02 SER N/A N/A N/A 31471321
    542896 6rs9:A (1.4) BS01 XYP N/A N/A N/A 31471321
    542897 6rs9:A (1.4) BS02 XYP N/A N/A N/A 31471321
    542898 6rs9:A (1.4) BS03 XYP N/A N/A N/A 31471321
    542899 6rsa:A (2.0) BS01 UVC 4.6.1.18 GO:0004519 ... P61823 4016100
    542900 6rsb:A (1.8) BS01 KGZ 2.7.10.2 GO:0004672 ... P23458 N/A
    542901 6rsb:B (1.8) BS01 KGZ 2.7.10.2 GO:0004672 ... P23458 N/A
    542902 6rsc:A (1.85) BS01 KH5 2.7.10.2 GO:0004672 ... P23458 N/A
    542903 6rsc:B (1.85) BS01 KH5 2.7.10.2 GO:0004672 ... P23458 N/A
    542904 6rsd:A (1.76) BS01 KH8 2.7.10.2 GO:0004672 ... P23458 N/A
    542905 6rsd:B (1.76) BS01 KH8 2.7.10.2 GO:0004672 ... P23458 N/A
    542906 6rse:A (1.8) BS01 KHH 2.7.10.2 GO:0004672 ... P23458 N/A
    542907 6rse:B (1.8) BS01 KHH 2.7.10.2 GO:0004672 ... P23458 N/A
    542908 6rsh:A (1.71) BS01 KHE 2.7.10.2 GO:0004672 ... P23458 N/A
    542909 6rsh:B (1.71) BS01 KHE 2.7.10.2 GO:0004672 ... P23458 N/A
    542910 6rsi:A (2.48) BS01 HEC ? GO:0005515 ... P00044 31490058
    542911 6rsi:A (2.48) BS02 EVB ? GO:0005515 ... P00044 31490058
    542912 6rsi:A (2.48) BS03 EVB ? GO:0005515 ... P00044 31490058
    542913 6rsi:A (2.48) BS04 EVB ? GO:0005515 ... P00044 31490058
    542914 6rsj:A (2.27) BS01 HEC ? GO:0005515 ... P00044 31490058
    542915 6rsj:A (2.27) BS02 EVB ? GO:0005515 ... P00044 31490058
    542916 6rsj:A (2.27) BS03 EVB ? GO:0005515 ... P00044 31490058
    542917 6rsj:A (2.27) BS04 EVB ? GO:0005515 ... P00044 31490058
    542918 6rsk:A (2.31) BS01 HEC ? GO:0005515 ... P00044 31490058
    542919 6rsk:A (2.31) BS02 EVB ? GO:0005515 ... P00044 31490058
    542920 6rsk:A (2.31) BS03 EVB ? GO:0005515 ... P00044 31490058
    542921 6rsk:A (2.31) BS04 EVB ? GO:0005515 ... P00044 31490058
    542922 6rsk:B (2.31) BS01 HEC ? GO:0005515 ... P00044 31490058
    542923 6rsk:B (2.31) BS02 EVB ? GO:0005515 ... P00044 31490058
    542924 6rsk:B (2.31) BS03 EVB ? GO:0005515 ... P00044 31490058
    542925 6rsk:B (2.31) BS04 EVB ? GO:0005515 ... P00044 31490058
    542926 6rsl:A (1.988) BS01 HEC ? GO:0005515 ... P00044 31490058
    542927 6rsl:A (1.988) BS02 EVB ? GO:0005515 ... P00044 31490058
    542928 6rsl:A (1.988) BS03 EVB ? GO:0005515 ... P00044 31490058
    542929 6rsl:A (1.988) BS04 EVB ? GO:0005515 ... P00044 31490058
    542930 6rsl:A (1.988) BS05 EVB ? GO:0005515 ... P00044 31490058
    542931 6rsl:B (1.988) BS01 EVB ? GO:0005515 ... P00044 31490058
    542932 6rsl:B (1.988) BS02 HEC ? GO:0005515 ... P00044 31490058
    542933 6rsl:B (1.988) BS03 EVB ? GO:0005515 ... P00044 31490058
    542934 6rsl:B (1.988) BS04 EVB ? GO:0005515 ... P00044 31490058
    542935 6rsl:B (1.988) BS05 EVB ? GO:0005515 ... P00044 31490058
    542936 6rsr:A (3.15) BS01 KHT 2.7.11.1 GO:0002218 ... Q9UHD2 31859507
    542937 6rst:A (3.29) BS01 KHQ 2.7.11.1 GO:0002218 ... Q9UHD2 31859507
    542938 6rsu:A (2.75) BS01 KJB 2.7.11.1 GO:0002218 ... Q9UHD2 31859507
    542939 6rsv:A (1.1) BS01 KHW 3.4.23.22 GO:0004190 ... P11838 N/A
    542940 6rsv:A (1.1) BS02 KHZ 3.4.23.22 GO:0004190 ... P11838 N/A
    542941 6rsw:A (1.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 31757941
    542942 6rsx:A (1.6) BS01 CMP N/A GO:0001932 ... N/A N/A
    542943 6rsx:A (1.6) BS02 CMP N/A GO:0001932 ... N/A N/A
    542944 6rsy:A (2.95) BS01 peptide ? N/A P04439 32310221
    542945 6rsy:D (2.95) BS01 peptide N/A N/A N/A 32310221
    542946 6rsy:E (2.95) BS01 peptide N/A N/A N/A 32310221
    542947 6rsy:F (2.95) BS01 peptide ? N/A P04439 32310221
    542948 6rsy:I (2.95) BS01 peptide N/A N/A N/A 32310221
    542949 6rsy:J (2.95) BS01 peptide N/A N/A N/A 32310221
    542950 6rsz:A (1.089) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542951 6rsz:A (1.089) BS02 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542952 6rsz:A (1.089) BS03 KJ5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32230853
    542953 6rt2:A (1.3) BS01 CV5 ? GO:0005778 ... Q8IEW2 32195483 MOAD: Kd=646uM
    542954 6rt2:B (1.3) BS01 CV5 ? GO:0005778 ... Q8IEW2 32195483 MOAD: Kd=646uM
    542955 6rt2:C (1.3) BS01 CV5 ? GO:0005778 ... Q8IEW2 32195483 MOAD: Kd=646uM
    542956 6rt2:D (1.3) BS01 CV5 ? GO:0005778 ... Q8IEW2 32195483 MOAD: Kd=646uM
    542957 6rt2:D (1.3) BS02 CV5 ? GO:0005778 ... Q8IEW2 32195483 MOAD: Kd=646uM
    542958 6rt4:A (1.49) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542959 6rt4:B (1.49) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542960 6rt5:B (2.303) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542961 6rt5:C (2.303) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542962 6rt6:B (1.461) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542963 6rt6:C (1.461) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542964 6rt7:B (1.73) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542965 6rt7:C (1.73) BS01 rna ? GO:0003723 ... Q96MU7 31670957
    542966 6rt8:A (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542967 6rt8:B (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542968 6rt8:C (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542969 6rt8:D (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542970 6rt8:E (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542971 6rt8:F (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542972 6rt8:G (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542973 6rt8:H (2.19) BS01 KJE 4.-.-.- GO:0005515 ... A0A2P1GIW2 32066966
    542974 6rt9:A (1.55) BS01 GLC 3.2.1.17 GO:0003796 ... P00698 32638771
    542975 6rt9:A (1.55) BS02 FRU 3.2.1.17 GO:0003796 ... P00698 32638771
    542976 6rtd:A (2.36) BS01 DHE 1.3.-.- GO:0006783 ... Q9I609 31173777
    542977 6rtd:A (2.36) BS02 HEC 1.3.-.- GO:0006783 ... Q9I609 31173777
    542978 6rtd:B (2.36) BS01 BU3 1.3.-.- GO:0006783 ... Q9I609 31173777
    542979 6rtd:B (2.36) BS02 DHE 1.3.-.- GO:0006783 ... Q9I609 31173777
    542980 6rtd:B (2.36) BS03 HEC 1.3.-.- GO:0006783 ... Q9I609 31173777
    542981 6rte:A (1.94) BS01 HEC 1.3.-.- GO:0006783 ... Q9I609 31173777
    542982 6rte:B (1.94) BS01 BU3 1.3.-.- GO:0006783 ... Q9I609 31173777
    542983 6rte:B (1.94) BS02 HEC 1.3.-.- GO:0006783 ... Q9I609 31173777
    542984 6rtg:A (1.9) BS01 UDP N/A GO:0016757 ... N/A 32195351
    542985 6rtg:A (1.9) BS02 MN N/A GO:0016757 ... N/A 32195351
    542986 6rtg:A (1.9) BS03 K N/A GO:0016757 ... N/A 32195351
    542987 6rti:A (2.2) BS01 rna 3.4.17.21 GO:0004180 ... Q04609 32525981
    542988 6rti:A (2.2) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 32525981
    542989 6rti:A (2.2) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 32525981
    542990 6rti:A (2.2) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 32525981
    542991 6rti:A (2.2) BS05 G88 3.4.17.21 GO:0004180 ... Q04609 32525981 BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM
    542992 6rtj:A (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799
    542993 6rtj:A (2.0) BS02 FXH 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799 MOAD: ic50=11.2uM
    542994 6rtj:A (2.0) BS03 CA 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799
    542995 6rtm:A (2.1) BS01 FAD 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799
    542996 6rtm:A (2.1) BS02 KJH 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799
    542997 6rtn:A (2.17) BS01 KJK 3.5.2.6 GO:0005886 ... P14489 31454231
    542998 6rtn:B (2.17) BS01 KJK 3.5.2.6 GO:0005886 ... P14489 31454231
    542999 6rto:A (2.3) BS01 FAD 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799
    543000 6rto:A (2.3) BS02 KJH 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 31870799

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).