SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    543201 6ruz:C (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543202 6ruz:C (2.9) BS02 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543203 6ruz:D (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543204 6ruz:D (2.9) BS02 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543205 6rv0:A (2.7) BS01 PMP 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 31794008
    543206 6rv1:A (3.0) BS01 PLP 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 31794008
    543207 6rv2:A (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    543208 6rv2:A (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    543209 6rv2:A (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    543210 6rv2:A (3.0) BS04 Y01 ? GO:0005252 ... O14649 32499642
    543211 6rv2:A (3.0) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543212 6rv2:A (3.0) BS06 K ? GO:0005252 ... O14649 32499642
    543213 6rv2:B (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    543214 6rv2:B (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    543215 6rv2:B (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    543216 6rv2:B (3.0) BS04 Y01 ? GO:0005252 ... O14649 32499642
    543217 6rv2:B (3.0) BS05 K ? GO:0005252 ... O14649 32499642
    543218 6rv2:B (3.0) BS06 Y01 ? GO:0005252 ... O14649 32499642
    543219 6rv2:B (3.0) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543220 6rv2:C (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    543221 6rv2:C (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    543222 6rv2:C (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    543223 6rv2:C (3.0) BS04 K ? GO:0005252 ... O14649 32499642
    543224 6rv2:C (3.0) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543225 6rv2:D (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    543226 6rv2:D (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    543227 6rv2:D (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    543228 6rv2:D (3.0) BS04 K ? GO:0005252 ... O14649 32499642
    543229 6rv2:D (3.0) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543230 6rv2:D (3.0) BS06 Y01 ? GO:0005252 ... O14649 32499642
    543231 6rv2:D (3.0) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543232 6rv3:A (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    543233 6rv3:A (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    543234 6rv3:A (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    543235 6rv3:A (2.9) BS04 Y01 ? GO:0005252 ... O14649 32499642
    543236 6rv3:A (2.9) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543237 6rv3:A (2.9) BS06 K ? GO:0005252 ... O14649 32499642
    543238 6rv3:A (2.9) BS07 KKQ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=172nM
    543239 6rv3:A (2.9) BS08 Y01 ? GO:0005252 ... O14649 32499642
    543240 6rv3:B (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    543241 6rv3:B (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    543242 6rv3:B (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    543243 6rv3:B (2.9) BS04 Y01 ? GO:0005252 ... O14649 32499642
    543244 6rv3:B (2.9) BS05 K ? GO:0005252 ... O14649 32499642
    543245 6rv3:B (2.9) BS06 KKQ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=172nM
    543246 6rv3:B (2.9) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543247 6rv3:B (2.9) BS08 Y01 ? GO:0005252 ... O14649 32499642
    543248 6rv3:C (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    543249 6rv3:C (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    543250 6rv3:C (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    543251 6rv3:C (2.9) BS04 K ? GO:0005252 ... O14649 32499642
    543252 6rv3:C (2.9) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543253 6rv3:C (2.9) BS06 KKQ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=172nM
    543254 6rv3:C (2.9) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543255 6rv3:D (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    543256 6rv3:D (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    543257 6rv3:D (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    543258 6rv3:D (2.9) BS04 K ? GO:0005252 ... O14649 32499642
    543259 6rv3:D (2.9) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543260 6rv3:D (2.9) BS06 KKQ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=172nM
    543261 6rv3:D (2.9) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543262 6rv3:D (2.9) BS08 Y01 ? GO:0005252 ... O14649 32499642
    543263 6rv3:D (2.9) BS09 DMU ? GO:0005252 ... O14649 32499642
    543264 6rv4:A (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    543265 6rv4:A (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    543266 6rv4:A (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    543267 6rv4:A (3.1) BS04 Y01 ? GO:0005252 ... O14649 32499642
    543268 6rv4:A (3.1) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543269 6rv4:A (3.1) BS06 KKZ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=42.0nM
    543270 6rv4:A (3.1) BS07 K ? GO:0005252 ... O14649 32499642
    543271 6rv4:B (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    543272 6rv4:B (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    543273 6rv4:B (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    543274 6rv4:B (3.1) BS04 KKZ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=42.0nM
    543275 6rv4:B (3.1) BS05 K ? GO:0005252 ... O14649 32499642
    543276 6rv4:B (3.1) BS06 Y01 ? GO:0005252 ... O14649 32499642
    543277 6rv4:B (3.1) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543278 6rv4:C (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    543279 6rv4:C (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    543280 6rv4:C (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    543281 6rv4:C (3.1) BS04 K ? GO:0005252 ... O14649 32499642
    543282 6rv4:C (3.1) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543283 6rv4:C (3.1) BS06 KKZ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=42.0nM
    543284 6rv4:C (3.1) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543285 6rv4:D (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    543286 6rv4:D (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    543287 6rv4:D (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    543288 6rv4:D (3.1) BS04 K ? GO:0005252 ... O14649 32499642
    543289 6rv4:D (3.1) BS05 Y01 ? GO:0005252 ... O14649 32499642
    543290 6rv4:D (3.1) BS06 KKZ ? GO:0005252 ... O14649 32499642 BindingDB: IC50=42.0nM
    543291 6rv4:D (3.1) BS07 Y01 ? GO:0005252 ... O14649 32499642
    543292 6rv5:A (1.58) BS01 FRU 2.4.1.10 GO:0009758 ... B2VCC3 31877648
    543293 6rv5:A (1.58) BS02 ZN 2.4.1.10 GO:0009758 ... B2VCC3 31877648
    543294 6rv5:A (1.58) BS03 ZN 2.4.1.10 GO:0009758 ... B2VCC3 31877648
    543295 6rv6:A (3.507) BS01 FUC ? N/A P27918 31507604
    543296 6rv6:A (3.507) BS02 FUC ? N/A P27918 31507604
    543297 6rv6:A (3.507) BS03 MAN ? N/A P27918 31507604
    543298 6rv6:A (3.507) BS04 MAN ? N/A P27918 31507604
    543299 6rv6:A (3.507) BS05 MAN ? N/A P27918 31507604
    543300 6rv6:A (3.507) BS06 MAN ? N/A P27918 31507604
    543301 6rv6:A (3.507) BS07 MAN ? N/A P27918 31507604
    543302 6rv6:B (3.507) BS01 FUC ? N/A P27918 31507604
    543303 6rv6:B (3.507) BS02 BGC ? N/A P27918 31507604
    543304 6rv6:B (3.507) BS03 FUC ? N/A P27918 31507604
    543305 6rv6:B (3.507) BS04 MAN ? N/A P27918 31507604
    543306 6rv6:B (3.507) BS05 MAN ? N/A P27918 31507604
    543307 6rv6:B (3.507) BS06 MAN ? N/A P27918 31507604
    543308 6rv6:B (3.507) BS07 MAN ? N/A P27918 31507604
    543309 6rv6:B (3.507) BS08 MAN ? N/A P27918 31507604
    543310 6rv6:B (3.507) BS09 MAN ? N/A P27918 31507604
    543311 6rv7:B (1.73) BS01 GCV 3.1.1.117 N/A A0A0A7EQR3 32094331
    543312 6rv8:A (1.85) BS01 XYP 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    543313 6rv8:A (1.85) BS02 MAN 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    543314 6rv8:B (1.85) BS01 XYL 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    543315 6rv8:B (1.85) BS02 GCV 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    543316 6rv8:B (1.85) BS03 MAN 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    543317 6rv9:B (1.64) BS01 XYL 3.1.1.117 N/A A0A0A7EQR3 32094331
    543318 6rv9:B (1.64) BS02 XYP 3.1.1.117 N/A A0A0A7EQR3 32094331
    543319 6rv9:B (1.64) BS03 GCV 3.1.1.117 N/A A0A0A7EQR3 32094331
    543320 6rvb:A (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543321 6rvb:A (2.9) BS02 NAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543322 6rvb:A (2.9) BS03 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543323 6rvb:A (2.9) BS04 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543324 6rvb:A (2.9) BS05 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543325 6rvb:B (2.9) BS01 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543326 6rvb:B (2.9) BS02 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543327 6rvb:B (2.9) BS03 NAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543328 6rvb:B (2.9) BS04 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543329 6rvb:C (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543330 6rvb:C (2.9) BS02 NAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543331 6rvb:C (2.9) BS03 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543332 6rvb:D (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543333 6rvb:D (2.9) BS02 NAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543334 6rvb:D (2.9) BS03 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543335 6rvd:A (3.5) BS01 CLR ? GO:0000122 ... Q13635 31548691
    543336 6rvd:A (3.5) BS02 CLR ? GO:0000122 ... Q13635 31548691
    543337 6rvd:B (3.5) BS01 CLR ? GO:0000122 ... Q13635 31548691
    543338 6rvd:B (3.5) BS02 CLR ? GO:0000122 ... Q13635 31548691
    543339 6rvd:C (3.5) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 31548691
    543340 6rvd:C (3.5) BS02 CA 3.1.-.- GO:0007267 ... Q15465 31548691
    543341 6rvd:C (3.5) BS03 CA 3.1.-.- GO:0007267 ... Q15465 31548691
    543342 6rve:A (1.15) BS01 XCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543343 6rve:A (1.15) BS02 KCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543344 6rvf:A (2.07) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863
    543345 6rvf:A (2.07) BS02 KKH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863 MOAD: Ki=730nM
    543346 6rvg:A (1.1) BS01 XCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543347 6rvg:A (1.1) BS02 XCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543348 6rvg:A (1.1) BS03 XCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543349 6rvg:A (1.1) BS04 KCO 3.4.21.64 GO:0004252 ... P06873 31490500
    543350 6rvh:A (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543351 6rvh:A (3.0) BS02 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543352 6rvh:A (3.0) BS03 VK3 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543353 6rvh:A (3.0) BS04 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543354 6rvh:A (3.0) BS05 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543355 6rvh:B (3.0) BS01 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543356 6rvh:B (3.0) BS02 VK3 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543357 6rvh:B (3.0) BS03 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543358 6rvh:B (3.0) BS04 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543359 6rvh:C (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543360 6rvh:C (3.0) BS02 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543361 6rvh:D (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543362 6rvh:D (3.0) BS02 COA 1.6.-.- GO:0000166 ... Q72HK3 31520616
    543363 6rvk:A (1.58) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863
    543364 6rvk:A (1.58) BS02 R29 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863 MOAD: Ki=439nM
    543365 6rvl:A (1.72) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863
    543366 6rvl:A (1.72) BS02 KKE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863 MOAD: Ki=1148nM
    543367 6rvm:A (2.155) BS01 GOL ? GO:0003924 ... P0A031 31997533
    543368 6rvm:A (2.155) BS02 GOL ? GO:0003924 ... P0A031 31997533
    543369 6rvm:A (2.155) BS03 GOL ? GO:0003924 ... P0A031 31997533
    543370 6rvm:B (2.155) BS01 GOL ? GO:0003924 ... P0A031 31997533
    543371 6rvm:C (2.155) BS01 GOL ? GO:0003924 ... P0A031 31997533
    543372 6rvm:C (2.155) BS02 MG ? GO:0003924 ... P0A031 31997533
    543373 6rvn:A (1.242) BS01 GDP ? GO:0003924 ... P0A031 31997533 MOAD: Kd=18.2nM
    543374 6rvn:A (1.242) BS02 CA ? GO:0003924 ... P0A031 31997533
    543375 6rvp:A (1.16) BS01 GDP ? GO:0003924 ... P0A031 31997533
    543376 6rvp:A (1.16) BS02 CA ? GO:0003924 ... P0A031 31997533
    543377 6rvp:A (1.16) BS03 MB3 ? GO:0003924 ... P0A031 31997533
    543378 6rvq:A (1.136) BS01 GDP ? GO:0003924 ... P0A031 31997533
    543379 6rvq:A (1.136) BS02 CA ? GO:0003924 ... P0A031 31997533
    543380 6rvq:A (1.136) BS03 EDO ? GO:0003924 ... P0A031 31997533
    543381 6rvz:A (2.1) BS01 KL2 ? GO:0003824 ... Q5VTE6 32732418
    543382 6rvz:A (2.1) BS02 ADN ? GO:0003824 ... Q5VTE6 32732418
    543383 6rw1:A (1.7) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863
    543384 6rw1:A (1.7) BS02 KL5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 31423863 MOAD: Ki=1305nM
    543385 6rw2:A (2.26) BS01 peptide 2.7.10.1 N/A P29317 32202781
    543386 6rw3:A (3.65) BS01 GLC ? GO:0005886 ... O97467 31996846
    543387 6rw3:A (3.65) BS02 BGC ? GO:0005886 ... O97467 31996846
    543388 6rw3:B (3.65) BS01 GLC ? GO:0005886 ... O97467 31996846
    543389 6rw3:B (3.65) BS02 BGC ? GO:0005886 ... O97467 31996846
    543390 6rw3:C (3.65) BS01 GLC ? GO:0005886 ... O97467 31996846
    543391 6rw3:C (3.65) BS02 BGC ? GO:0005886 ... O97467 31996846
    543392 6rw3:D (3.65) BS01 GLC ? GO:0005886 ... O97467 31996846
    543393 6rw3:D (3.65) BS02 BGC ? GO:0005886 ... O97467 31996846
    543394 6rw4:0 (2.97) BS01 rna ? GO:0003735 ... P82930 32522994
    543395 6rw4:2 (2.97) BS01 rna ? GO:0001650 ... Q96BP2 32522994
    543396 6rw4:3 (2.97) BS01 rna ? GO:0005515 ... Q9NWT8 32522994
    543397 6rw4:8 (2.97) BS01 rna ? GO:0003743 ... Q9H2K0 32522994
    543398 6rw4:B (2.97) BS01 rna ? GO:0003735 ... Q9Y399 32522994
    543399 6rw4:B (2.97) BS02 MG ? GO:0003735 ... Q9Y399 32522994
    543400 6rw4:C (2.97) BS01 rna ? GO:0003723 ... Q96EL2 32522994

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).