SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    543601 6rx0:C (1.2) BS01 NAP ? GO:0000166 ... O76290 35675511
    543602 6rx0:D (1.2) BS01 NAP ? GO:0000166 ... O76290 35675511
    543603 6rx0:D (1.2) BS02 KM5 ? GO:0000166 ... O76290 35675511
    543604 6rx2:A (1.82) BS01 peptide ? GO:0000122 ... P31947 32501690
    543605 6rx2:A (1.82) BS02 CA ? GO:0000122 ... P31947 32501690
    543606 6rx2:A (1.82) BS03 KM2 ? GO:0000122 ... P31947 32501690
    543607 6rx4:A (3.3) BS01 peptide 7.1.1.7 GO:0005515 ... P0ABJ9 31723136
    543608 6rx4:A (3.3) BS02 HEB 7.1.1.7 GO:0005515 ... P0ABJ9 31723136
    543609 6rx4:A (3.3) BS03 HEB 7.1.1.7 GO:0005515 ... P0ABJ9 31723136
    543610 6rx4:A (3.3) BS04 HDD 7.1.1.7 GO:0005515 ... P0ABJ9 31723136
    543611 6rx4:B (3.3) BS01 HDD 7.1.1.7 GO:0005515 ... P0ABK2 31723136
    543612 6rx4:B (3.3) BS02 UQ8 7.1.1.7 GO:0005515 ... P0ABK2 31723136
    543613 6rx5:A (1.42) BS01 NAP ? GO:0000166 ... O76290 35675511
    543614 6rx5:A (1.42) BS02 FE1 ? GO:0000166 ... O76290 35675511
    543615 6rx5:B (1.42) BS01 NAP ? GO:0000166 ... O76290 35675511
    543616 6rx5:B (1.42) BS02 FE1 ? GO:0000166 ... O76290 35675511
    543617 6rx5:C (1.42) BS01 NAP ? GO:0000166 ... O76290 35675511
    543618 6rx5:D (1.42) BS01 NAP ? GO:0000166 ... O76290 35675511
    543619 6rx5:D (1.42) BS02 FE1 ? GO:0000166 ... O76290 35675511
    543620 6rx6:A (1.11) BS01 NAP ? GO:0000166 ... O76290 35675511
    543621 6rx6:A (1.11) BS02 KMK ? GO:0000166 ... O76290 35675511
    543622 6rx6:B (1.11) BS01 NAP ? GO:0000166 ... O76290 35675511
    543623 6rx6:B (1.11) BS02 KMK ? GO:0000166 ... O76290 35675511
    543624 6rx6:C (1.11) BS01 NAP ? GO:0000166 ... O76290 35675511
    543625 6rx6:C (1.11) BS02 KMK ? GO:0000166 ... O76290 35675511
    543626 6rx6:D (1.11) BS01 NAP ? GO:0000166 ... O76290 35675511
    543627 6rx6:D (1.11) BS02 KMK ? GO:0000166 ... O76290 35675511
    543628 6rx8:A (1.92) BS01 FUM 4.3.2.1 GO:0003824 ... Q11KV9 31625664
    543629 6rx8:A (1.92) BS02 FUM 4.3.2.1 GO:0003824 ... Q11KV9 31625664
    543630 6rxb:A (2.25) BS01 MIY N/A GO:0003677 ... N/A N/A
    543631 6rxb:B (2.25) BS01 MIY N/A GO:0003677 ... N/A N/A
    543632 6rxb:C (2.25) BS01 MIY N/A GO:0003677 ... N/A N/A
    543633 6rxb:D (2.25) BS01 MIY N/A GO:0003677 ... N/A N/A
    543634 6rxc:A (2.1) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 35675511
    543635 6rxc:A (2.1) BS02 KMK 1.5.1.33 GO:0004155 ... Q01782 35675511
    543636 6rxc:B (2.1) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 35675511
    543637 6rxc:B (2.1) BS02 KMK 1.5.1.33 GO:0004155 ... Q01782 35675511
    543638 6rxc:C (2.1) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 35675511
    543639 6rxc:C (2.1) BS02 KMK 1.5.1.33 GO:0004155 ... Q01782 35675511
    543640 6rxc:D (2.1) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 35675511
    543641 6rxc:D (2.1) BS02 KMK 1.5.1.33 GO:0004155 ... Q01782 35675511
    543642 6rxd:A (1.65) BS01 ZN ? N/A B7GTV0 33454010
    543643 6rxd:A (1.65) BS02 ZN ? N/A B7GTV0 33454010
    543644 6rxd:B (1.65) BS01 ZN ? N/A B7GTV0 33454010
    543645 6rxd:B (1.65) BS02 ZN ? N/A B7GTV0 33454010
    543646 6rxe:A (1.84) BS01 IHS ? N/A B7GTV0 33454010
    543647 6rxe:B (1.84) BS01 IHS ? N/A B7GTV0 33454010
    543648 6rxe:B (1.84) BS02 PO4 ? N/A B7GTV0 33454010
    543649 6rxf:A (2.397) BS01 ZN ? N/A B7GTV0 33454010
    543650 6rxf:A (2.397) BS02 ZN ? N/A B7GTV0 33454010
    543651 6rxf:A (2.397) BS03 ZN ? N/A B7GTV0 33454010
    543652 6rxf:A (2.397) BS04 ZN ? N/A B7GTV0 33454010
    543653 6rxf:A (2.397) BS05 ZN ? N/A B7GTV0 33454010
    543654 6rxf:A (2.397) BS06 ZN ? N/A B7GTV0 33454010
    543655 6rxf:B (2.397) BS01 ZN ? N/A B7GTV0 33454010
    543656 6rxf:B (2.397) BS02 ZN ? N/A B7GTV0 33454010
    543657 6rxf:B (2.397) BS03 ZN ? N/A B7GTV0 33454010
    543658 6rxf:B (2.397) BS04 ZN ? N/A B7GTV0 33454010
    543659 6rxf:B (2.397) BS05 ZN ? N/A B7GTV0 33454010
    543660 6rxf:B (2.397) BS06 ZN ? N/A B7GTV0 33454010
    543661 6rxg:A (1.71) BS01 PO4 ? N/A B7GTV0 33454010
    543662 6rxg:A (1.71) BS02 ZN ? N/A B7GTV0 33454010
    543663 6rxg:A (1.71) BS03 ZN ? N/A B7GTV0 33454010
    543664 6rxg:B (1.71) BS01 PO4 ? N/A B7GTV0 33454010
    543665 6rxg:B (1.71) BS02 ZN ? N/A B7GTV0 33454010
    543666 6rxg:B (1.71) BS03 ZN ? N/A B7GTV0 33454010
    543667 6rxh:B (2.0) BS01 peptide 4.1.1.11 GO:0004068 ... P0A790 32148849
    543668 6rxh:E (2.0) BS01 peptide 4.1.1.11 GO:0004068 ... P0A790 32148849
    543669 6rxh:E (2.0) BS02 peptide 4.1.1.11 GO:0004068 ... P0A790 32148849
    543670 6rxj:A (1.6) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543671 6rxj:A (1.6) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543672 6rxj:B (1.6) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543673 6rxj:B (1.6) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543674 6rxk:A (1.35) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543675 6rxk:A (1.35) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543676 6rxl:A (2.3) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543677 6rxl:A (2.3) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543678 6rxm:A (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543679 6rxm:A (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543680 6rxm:A (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543681 6rxm:B (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543682 6rxm:B (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543683 6rxm:B (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543684 6rxm:C (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543685 6rxm:C (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543686 6rxm:C (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543687 6rxm:D (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543688 6rxm:D (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543689 6rxm:D (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543690 6rxm:E (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543691 6rxm:E (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543692 6rxm:E (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543693 6rxm:F (1.92) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543694 6rxm:F (1.92) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543695 6rxm:F (1.92) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543696 6rxn:A (1.5) BS01 FE ? GO:0005506 ... P04170 2091025
    543697 6rxo:A (1.95) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543698 6rxo:A (1.95) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543699 6rxo:A (1.95) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543700 6rxo:B (1.95) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543701 6rxo:B (1.95) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543702 6rxo:B (1.95) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543703 6rxp:A (1.8) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543704 6rxp:A (1.8) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543705 6rxp:A (1.8) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543706 6rxp:B (1.8) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543707 6rxp:B (1.8) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543708 6rxp:B (1.8) BS03 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543709 6rxq:A (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543710 6rxq:A (1.7) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543711 6rxq:A (1.7) BS03 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543712 6rxq:B (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543713 6rxq:B (1.7) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543714 6rxq:B (1.7) BS03 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543715 6rxq:C (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543716 6rxq:C (1.7) BS02 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543717 6rxq:D (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543718 6rxq:D (1.7) BS02 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543719 6rxr:A (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543720 6rxr:A (1.7) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543721 6rxr:A (1.7) BS03 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543722 6rxr:B (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543723 6rxr:B (1.7) BS02 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543724 6rxr:B (1.7) BS03 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543725 6rxr:C (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543726 6rxr:C (1.7) BS02 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543727 6rxr:D (1.7) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543728 6rxr:D (1.7) BS02 KMQ 2.3.1.286 GO:0036054 ... P75960 32187803
    543729 6rxs:A (1.599) BS01 peptide 2.3.1.286 GO:0036054 ... P75960 32187803
    543730 6rxs:A (1.599) BS02 ZN 2.3.1.286 GO:0036054 ... P75960 32187803
    543731 6rxt:CB (7.0) BS01 rna ? GO:0000494 ... G0SGY2 31378463
    543732 6rxt:CC (7.0) BS01 rna ? GO:0030515 ... G0S2U4 31378463
    543733 6rxt:CC (7.0) BS02 rna ? GO:0030515 ... G0S2U4 31378463
    543734 6rxt:CD (7.0) BS01 rna ? GO:0005634 ... G0RYF6 31378463
    543735 6rxt:CD (7.0) BS02 rna ? GO:0005634 ... G0RYF6 31378463
    543736 6rxt:CE (7.0) BS01 rna ? GO:0000398 ... G0SGM0 31378463
    543737 6rxt:CE (7.0) BS02 rna ? GO:0000398 ... G0SGM0 31378463
    543738 6rxt:CF (7.0) BS01 rna ? GO:0000398 ... G0SGM0 31378463
    543739 6rxt:CG (7.0) BS01 rna ? GO:0005634 ... G0SG51 31378463
    543740 6rxt:CH (7.0) BS01 rna ? GO:0000479 ... G0S0B1 31378463
    543741 6rxt:CI (7.0) BS01 rna ? GO:0000462 ... G0S445 31378463
    543742 6rxt:CI (7.0) BS02 rna ? GO:0000462 ... G0S445 31378463
    543743 6rxt:CI (7.0) BS03 GTP ? GO:0000462 ... G0S445 31378463
    543744 6rxt:CI (7.0) BS04 MG ? GO:0000462 ... G0S445 31378463
    543745 6rxt:CJ (7.0) BS01 rna ? GO:0003723 ... G0SDL4 31378463
    543746 6rxt:CJ (7.0) BS02 rna ? GO:0003723 ... G0SDL4 31378463
    543747 6rxt:CK (7.0) BS01 rna ? GO:0005730 ... G0SE90 31378463
    543748 6rxt:CL (7.0) BS01 rna ? GO:0005634 ... G0S9I7 31378463
    543749 6rxt:CM (7.0) BS01 rna ? GO:0000462 ... G0RY94 31378463
    543750 6rxt:CM (7.0) BS02 rna ? GO:0000462 ... G0RY94 31378463
    543751 6rxt:CN (7.0) BS01 rna ? GO:0005634 ... G0SAY9 31378463
    543752 6rxt:CP (7.0) BS01 rna ? GO:0003676 ... G0S3V7 31378463
    543753 6rxt:CQ (7.0) BS01 rna ? GO:0003676 ... G0S3T2 31378463
    543754 6rxt:CT (7.0) BS01 rna ? GO:0003723 ... G0S4E3 31378463
    543755 6rxt:CT (7.0) BS02 rna ? GO:0003723 ... G0S4E3 31378463
    543756 6rxt:CU (7.0) BS01 rna ? GO:0000462 ... G0S5F1 31378463
    543757 6rxt:Ca (7.0) BS01 rna ? GO:0003735 ... G0S7T8 31378463
    543758 6rxt:Cc (7.0) BS01 rna ? GO:0003723 ... G0S1Z0 31378463
    543759 6rxt:Cg (7.0) BS01 rna ? GO:0003723 ... G0S0Z4 31378463
    543760 6rxt:Ch (7.0) BS01 rna ? GO:0003735 ... G0RZM9 31378463
    543761 6rxt:Ci (7.0) BS01 rna ? GO:0003735 ... G0SFL1 31378463
    543762 6rxt:Cj (7.0) BS01 rna ? GO:0000462 ... G0SBR7 31378463
    543763 6rxt:Cm (7.0) BS01 rna ? GO:0003735 ... G0SHI0 31378463
    543764 6rxt:Cn (7.0) BS01 rna ? GO:0003735 ... G0RY17 31378463
    543765 6rxt:Cp (7.0) BS01 rna ? GO:0000028 ... G0S9M9 31378463
    543766 6rxt:UA (7.0) BS01 rna ? GO:0000028 ... G0SF93 31378463
    543767 6rxt:UA (7.0) BS02 rna ? GO:0000028 ... G0SF93 31378463
    543768 6rxt:UB (7.0) BS01 rna ? GO:0005634 ... G0SDW0 31378463
    543769 6rxt:UB (7.0) BS02 rna ? GO:0005634 ... G0SDW0 31378463
    543770 6rxt:UC (7.0) BS01 rna ? GO:0000462 ... G0S4H3 31378463
    543771 6rxt:UD (7.0) BS01 rna ? GO:0000462 ... G0SCT7 31378463
    543772 6rxt:UE (7.0) BS01 rna ? GO:0000462 ... G0RYX2 31378463
    543773 6rxt:UF (7.0) BS01 rna ? GO:0000462 ... G0S387 31378463
    543774 6rxt:UF (7.0) BS02 rna ? GO:0000462 ... G0S387 31378463
    543775 6rxt:UG (7.0) BS01 rna ? GO:0000462 ... G0RZ99 31378463
    543776 6rxt:UG (7.0) BS02 rna ? GO:0000462 ... G0RZ99 31378463
    543777 6rxt:UH (7.0) BS01 rna ? GO:0005634 ... P0CT47 31378463
    543778 6rxt:UJ (7.0) BS01 rna ? GO:0000462 ... G0S5L1 31378463
    543779 6rxt:UK (7.0) BS01 rna ? GO:0005634 ... G0SF32 31378463
    543780 6rxt:UK (7.0) BS02 rna ? GO:0005634 ... G0SF32 31378463
    543781 6rxt:UL (7.0) BS01 rna ? GO:0005730 ... G0RZL9 31378463
    543782 6rxt:UM (7.0) BS01 rna ? GO:0000472 ... G0SG95 31378463
    543783 6rxt:UN (7.0) BS01 rna ? GO:0005634 ... G0S8Y4 31378463
    543784 6rxt:UO (7.0) BS01 rna ? GO:0005634 ... G0SEI5 31378463
    543785 6rxt:UP (7.0) BS01 rna ? GO:0006364 ... G0S612 31378463
    543786 6rxt:UQ (7.0) BS01 rna ? GO:0003723 ... G0SCS8 31378463
    543787 6rxt:UR (7.0) BS01 rna ? GO:0005730 ... G0SBN9 31378463
    543788 6rxt:UR (7.0) BS02 rna ? GO:0005730 ... G0SBN9 31378463
    543789 6rxt:US (7.0) BS01 rna ? GO:0005634 ... G0RZL4 31378463
    543790 6rxt:UU (7.0) BS01 rna ? GO:0006364 ... G0S872 31378463
    543791 6rxt:UU (7.0) BS02 rna ? GO:0006364 ... G0S872 31378463
    543792 6rxt:UX (7.0) BS01 rna N/A GO:0032040 ... N/A 31378463
    543793 6rxt:UX (7.0) BS02 rna N/A GO:0032040 ... N/A 31378463
    543794 6rxt:UX (7.0) BS03 ZN N/A GO:0032040 ... N/A 31378463
    543795 6rxt:UZ (7.0) BS01 rna ? N/A G0S7X0 31378463
    543796 6rxu:CB (3.5) BS01 rna ? GO:0000494 ... G0SGY2 31378463
    543797 6rxu:CC (3.5) BS01 rna ? GO:0030515 ... G0S2U4 31378463
    543798 6rxu:CC (3.5) BS02 rna ? GO:0030515 ... G0S2U4 31378463
    543799 6rxu:CD (3.5) BS01 rna ? GO:0005634 ... G0RYF6 31378463
    543800 6rxu:CD (3.5) BS02 rna ? GO:0005634 ... G0RYF6 31378463

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).