SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    544601 6s0s:E (2.4) BS02 RIO 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544602 6s0s:F (2.4) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544603 6s0s:F (2.4) BS02 RIO 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544604 6s0u:A (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544605 6s0u:B (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544606 6s0u:C (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544607 6s0u:D (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544608 6s0u:E (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544609 6s0u:F (2.15) BS01 AKG 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544610 6s0v:A (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544611 6s0v:B (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544612 6s0v:C (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544613 6s0v:D (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544614 6s0v:E (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544615 6s0v:F (3.0) BS01 XXX 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544616 6s0w:A (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544617 6s0w:B (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544618 6s0w:C (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544619 6s0w:D (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544620 6s0w:E (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544621 6s0w:F (2.36) BS01 9CS 1.14.11.37 GO:0016491 ... Q6L732 32592631
    544622 6s0x:1 (2.425) BS01 rna ? GO:0003735 ... A0A077V2P0 31391518
    544623 6s0x:2 (2.425) BS01 rna ? GO:0003735 ... W8TQ59 31391518
    544624 6s0x:3 (2.425) BS01 rna ? GO:0003735 ... A0A077UL47 31391518
    544625 6s0x:4 (2.425) BS01 rna ? GO:0003735 ... A0A077UGV8 31391518
    544626 6s0x:C (2.425) BS01 rna ? GO:0002181 ... B3VKN3 31391518
    544627 6s0x:D (2.425) BS01 rna ? GO:0003735 ... W8U3W0 31391518
    544628 6s0x:E (2.425) BS01 rna ? GO:0003735 ... W8TRC7 31391518
    544629 6s0x:F (2.425) BS01 rna ? GO:0000049 ... W8TUC3 31391518
    544630 6s0x:F (2.425) BS02 rna ? GO:0000049 ... W8TUC3 31391518
    544631 6s0x:G (2.425) BS01 rna ? GO:0002181 ... W8U3X2 31391518
    544632 6s0x:H (2.425) BS01 rna ? GO:0003729 ... W8TUE6 31391518
    544633 6s0x:I (2.425) BS01 rna ? GO:0003735 ... A0A077UUA0 31391518
    544634 6s0x:I (2.425) BS02 rna ? GO:0003735 ... A0A077UUA0 31391518
    544635 6s0x:J (2.425) BS01 rna ? GO:0003735 ... A0A077UGA7 31391518
    544636 6s0x:K (2.425) BS01 rna ? GO:0000049 ... A0A077V4G0 31391518
    544637 6s0x:L (2.425) BS01 rna ? GO:0003735 ... A0A077UG91 31391518
    544638 6s0x:M (2.425) BS01 rna ? GO:0003735 ... W8TRE0 31391518
    544639 6s0x:M (2.425) BS02 rna ? GO:0003735 ... W8TRE0 31391518
    544640 6s0x:N (2.425) BS01 rna ? GO:0003735 ... A0A077UVB6 31391518
    544641 6s0x:O (2.425) BS01 rna ? GO:0000027 ... A0A077VMP6 31391518
    544642 6s0x:P (2.425) BS01 rna ? GO:0003723 ... D7URR3 31391518
    544643 6s0x:Q (2.425) BS01 rna ? GO:0003735 ... A0A077UKF9 31391518
    544644 6s0x:R (2.425) BS01 rna ? GO:0003735 ... W8TUB4 31391518
    544645 6s0x:S (2.425) BS01 rna ? GO:0003723 ... W8TRD5 31391518
    544646 6s0x:T (2.425) BS01 rna ? GO:0003735 ... N/A 31391518
    544647 6s0x:U (2.425) BS01 rna ? GO:0003735 ... A0A077ULC5 31391518
    544648 6s0x:U (2.425) BS02 rna ? GO:0003735 ... A0A077ULC5 31391518
    544649 6s0x:V (2.425) BS01 rna ? GO:0003735 ... A0A077URJ8 31391518
    544650 6s0x:W (2.425) BS01 rna ? GO:0003735 ... A0A077W1J5 31391518
    544651 6s0x:X (2.425) BS01 rna ? GO:0003735 ... W8UVN7 31391518
    544652 6s0x:X (2.425) BS02 rna ? GO:0003735 ... W8UVN7 31391518
    544653 6s0x:Y (2.425) BS01 rna ? GO:0003735 ... A0A380EL30 31391518
    544654 6s0x:Z (2.425) BS01 rna N/A GO:0003735 ... N/A 31391518
    544655 6s0x:b (2.425) BS01 rna ? GO:0003735 ... A0A2X2M020 31391518
    544656 6s0x:c (2.425) BS01 rna ? GO:0003676 ... A0A077UU26 31391518
    544657 6s0x:d (2.425) BS01 rna ? GO:0003723 ... W8TVK2 31391518
    544658 6s0x:e (2.425) BS01 rna ? GO:0003723 ... W8TUC9 31391518
    544659 6s0x:f (2.425) BS01 rna ? GO:0003735 ... W8TPC6 31391518
    544660 6s0x:g (2.425) BS01 rna ? GO:0000049 ... A0A077VHU6 31391518
    544661 6s0x:h (2.425) BS01 rna ? GO:0003735 ... W8U8T8 31391518
    544662 6s0x:i (2.425) BS01 rna ? GO:0003723 ... A0A1Q4GY48 31391518
    544663 6s0x:j (2.425) BS01 rna ? GO:0000049 ... A0A0H2K0A0 31391518
    544664 6s0x:k (2.425) BS01 rna ? GO:0003735 ... A0A077UKD6 31391518
    544665 6s0x:l (2.425) BS01 rna ? GO:0003735 ... N/A 31391518
    544666 6s0x:m (2.425) BS01 rna ? GO:0003676 ... W8U8U6 31391518
    544667 6s0x:n (2.425) BS01 rna ? GO:0003735 ... A0A077UGW7 31391518
    544668 6s0x:o (2.425) BS01 rna ? GO:0003735 ... W8U6H8 31391518
    544669 6s0x:p (2.425) BS01 rna ? GO:0003735 ... W8U6K4 31391518
    544670 6s0x:q (2.425) BS01 rna ? GO:0003735 ... A0A077VLD5 31391518
    544671 6s0x:r (2.425) BS01 rna ? GO:0003735 ... A0A077UZF4 31391518
    544672 6s0x:s (2.425) BS01 rna ? GO:0003723 ... N/A 31391518
    544673 6s0x:t (2.425) BS01 rna ? GO:0003723 ... W8UXC3 31391518
    544674 6s0x:u (2.425) BS01 rna N/A GO:0003735 ... N/A 31391518
    544675 6s0x:v (2.425) BS01 rna ? GO:0044238 ... D2Z097 31391518
    544676 6s0y:A (1.81) BS01 peptide N/A N/A N/A 31921179
    544677 6s0y:B (1.81) BS01 peptide N/A N/A N/A 31921179
    544678 6s0y:B (1.81) BS02 peptide N/A N/A N/A 31921179
    544679 6s0z:1 (2.3) BS01 rna ? GO:0003735 ... A0A077V2P0 31391518
    544680 6s0z:2 (2.3) BS01 rna ? GO:0003735 ... W8TQ59 31391518
    544681 6s0z:3 (2.3) BS01 rna ? GO:0003735 ... A0A077UL47 31391518
    544682 6s0z:4 (2.3) BS01 rna ? GO:0003735 ... A0A077UGV8 31391518
    544683 6s0z:C (2.3) BS01 rna ? GO:0002181 ... B3VKN3 31391518
    544684 6s0z:D (2.3) BS01 rna ? GO:0003735 ... W8U3W0 31391518
    544685 6s0z:E (2.3) BS01 rna ? GO:0003735 ... W8TRC7 31391518
    544686 6s0z:F (2.3) BS01 rna ? GO:0000049 ... W8TUC3 31391518
    544687 6s0z:F (2.3) BS02 rna ? GO:0000049 ... W8TUC3 31391518
    544688 6s0z:G (2.3) BS01 rna ? GO:0002181 ... W8U3X2 31391518
    544689 6s0z:H (2.3) BS01 rna ? GO:0003729 ... W8TUE6 31391518
    544690 6s0z:I (2.3) BS01 rna ? GO:0003735 ... A0A077UUA0 31391518
    544691 6s0z:J (2.3) BS01 rna ? GO:0003735 ... A0A077UGA7 31391518
    544692 6s0z:K (2.3) BS01 rna ? GO:0000049 ... A0A077V4G0 31391518
    544693 6s0z:K (2.3) BS02 rna ? GO:0000049 ... A0A077V4G0 31391518
    544694 6s0z:L (2.3) BS01 rna ? GO:0003735 ... A0A077UG91 31391518
    544695 6s0z:M (2.3) BS01 rna ? GO:0003735 ... W8TRE0 31391518
    544696 6s0z:M (2.3) BS02 rna ? GO:0003735 ... W8TRE0 31391518
    544697 6s0z:N (2.3) BS01 rna ? GO:0003735 ... A0A077UVB6 31391518
    544698 6s0z:O (2.3) BS01 rna ? GO:0000027 ... A0A077VMP6 31391518
    544699 6s0z:P (2.3) BS01 rna ? GO:0003723 ... D7URR3 31391518
    544700 6s0z:Q (2.3) BS01 rna ? GO:0003735 ... A0A077UKF9 31391518
    544701 6s0z:R (2.3) BS01 rna ? GO:0003735 ... W8TUB4 31391518
    544702 6s0z:S (2.3) BS01 rna ? GO:0003723 ... W8TRD5 31391518
    544703 6s0z:T (2.3) BS01 rna ? GO:0003735 ... N/A 31391518
    544704 6s0z:U (2.3) BS01 rna ? GO:0003735 ... A0A077ULC5 31391518
    544705 6s0z:U (2.3) BS02 rna ? GO:0003735 ... A0A077ULC5 31391518
    544706 6s0z:V (2.3) BS01 rna ? GO:0003735 ... A0A077URJ8 31391518
    544707 6s0z:W (2.3) BS01 rna ? GO:0003735 ... A0A077W1J5 31391518
    544708 6s0z:X (2.3) BS01 rna ? GO:0003735 ... W8UVN7 31391518
    544709 6s0z:X (2.3) BS02 rna ? GO:0003735 ... W8UVN7 31391518
    544710 6s0z:Y (2.3) BS01 rna ? GO:0003735 ... A0A380EL30 31391518
    544711 6s0z:Z (2.3) BS01 rna N/A GO:0003735 ... N/A 31391518
    544712 6s11:A (2.445) BS01 KQE 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    544713 6s11:B (2.445) BS01 KQE 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    544714 6s12:1 (3.2) BS01 rna ? GO:0003735 ... A0A077V2P0 31391518
    544715 6s12:2 (3.2) BS01 rna ? GO:0003735 ... W8TQ59 31391518
    544716 6s12:3 (3.2) BS01 rna ? GO:0003735 ... A0A077UL47 31391518
    544717 6s12:4 (3.2) BS01 rna ? GO:0003735 ... A0A077UGV8 31391518
    544718 6s12:C (3.2) BS01 rna ? GO:0002181 ... B3VKN3 31391518
    544719 6s12:D (3.2) BS01 rna ? GO:0003735 ... W8U3W0 31391518
    544720 6s12:E (3.2) BS01 rna ? GO:0003735 ... W8TRC7 31391518
    544721 6s12:F (3.2) BS01 rna ? GO:0000049 ... W8TUC3 31391518
    544722 6s12:F (3.2) BS02 rna ? GO:0000049 ... W8TUC3 31391518
    544723 6s12:G (3.2) BS01 rna ? GO:0002181 ... W8U3X2 31391518
    544724 6s12:H (3.2) BS01 rna ? GO:0003729 ... W8TUE6 31391518
    544725 6s12:I (3.2) BS01 rna ? GO:0003735 ... A0A077UUA0 31391518
    544726 6s12:J (3.2) BS01 rna ? GO:0003735 ... A0A077UGA7 31391518
    544727 6s12:K (3.2) BS01 rna ? GO:0000049 ... A0A077V4G0 31391518
    544728 6s12:K (3.2) BS02 rna ? GO:0000049 ... A0A077V4G0 31391518
    544729 6s12:L (3.2) BS01 rna ? GO:0003735 ... A0A077UG91 31391518
    544730 6s12:M (3.2) BS01 rna ? GO:0003735 ... W8TRE0 31391518
    544731 6s12:M (3.2) BS02 rna ? GO:0003735 ... W8TRE0 31391518
    544732 6s12:N (3.2) BS01 rna ? GO:0003735 ... A0A077UVB6 31391518
    544733 6s12:O (3.2) BS01 rna ? GO:0000027 ... A0A077VMP6 31391518
    544734 6s12:P (3.2) BS01 rna ? GO:0003723 ... D7URR3 31391518
    544735 6s12:Q (3.2) BS01 rna ? GO:0003735 ... A0A077UKF9 31391518
    544736 6s12:R (3.2) BS01 rna ? GO:0003735 ... W8TUB4 31391518
    544737 6s12:S (3.2) BS01 rna ? GO:0003723 ... W8TRD5 31391518
    544738 6s12:T (3.2) BS01 rna ? GO:0003735 ... N/A 31391518
    544739 6s12:U (3.2) BS01 rna ? GO:0003735 ... A0A077ULC5 31391518
    544740 6s12:U (3.2) BS02 rna ? GO:0003735 ... A0A077ULC5 31391518
    544741 6s12:V (3.2) BS01 rna ? GO:0003735 ... A0A077URJ8 31391518
    544742 6s12:W (3.2) BS01 rna ? GO:0003735 ... A0A077W1J5 31391518
    544743 6s12:X (3.2) BS01 rna ? GO:0003735 ... W8UVN7 31391518
    544744 6s12:Y (3.2) BS01 rna ? GO:0003735 ... A0A380EL30 31391518
    544745 6s12:Z (3.2) BS01 rna N/A GO:0003735 ... N/A 31391518
    544746 6s13:1 (3.58) BS01 rna ? GO:0003735 ... A0A077V2P0 31391518
    544747 6s13:2 (3.58) BS01 rna ? GO:0003735 ... W8TQ59 31391518
    544748 6s13:3 (3.58) BS01 rna ? GO:0003735 ... A0A077UL47 31391518
    544749 6s13:4 (3.58) BS01 rna ? GO:0003735 ... A0A077UGV8 31391518
    544750 6s13:C (3.58) BS01 rna ? GO:0002181 ... B3VKN3 31391518
    544751 6s13:D (3.58) BS01 rna ? GO:0003735 ... W8U3W0 31391518
    544752 6s13:E (3.58) BS01 rna ? GO:0003735 ... W8TRC7 31391518
    544753 6s13:F (3.58) BS01 rna ? GO:0000049 ... W8TUC3 31391518
    544754 6s13:F (3.58) BS02 rna ? GO:0000049 ... W8TUC3 31391518
    544755 6s13:G (3.58) BS01 rna ? GO:0002181 ... W8U3X2 31391518
    544756 6s13:H (3.58) BS01 rna ? GO:0003729 ... W8TUE6 31391518
    544757 6s13:I (3.58) BS01 rna ? GO:0003735 ... A0A077UUA0 31391518
    544758 6s13:I (3.58) BS02 rna ? GO:0003735 ... A0A077UUA0 31391518
    544759 6s13:J (3.58) BS01 rna ? GO:0003735 ... A0A077UGA7 31391518
    544760 6s13:K (3.58) BS01 rna ? GO:0000049 ... A0A077V4G0 31391518
    544761 6s13:K (3.58) BS02 rna ? GO:0000049 ... A0A077V4G0 31391518
    544762 6s13:L (3.58) BS01 rna ? GO:0003735 ... A0A077UG91 31391518
    544763 6s13:M (3.58) BS01 rna ? GO:0003735 ... W8TRE0 31391518
    544764 6s13:M (3.58) BS02 rna ? GO:0003735 ... W8TRE0 31391518
    544765 6s13:N (3.58) BS01 rna ? GO:0003735 ... A0A077UVB6 31391518
    544766 6s13:O (3.58) BS01 rna ? GO:0000027 ... A0A077VMP6 31391518
    544767 6s13:P (3.58) BS01 rna ? GO:0003723 ... D7URR3 31391518
    544768 6s13:Q (3.58) BS01 rna ? GO:0003735 ... A0A077UKF9 31391518
    544769 6s13:R (3.58) BS01 rna ? GO:0003735 ... W8TUB4 31391518
    544770 6s13:S (3.58) BS01 rna ? GO:0003723 ... W8TRD5 31391518
    544771 6s13:T (3.58) BS01 rna ? GO:0003735 ... N/A 31391518
    544772 6s13:U (3.58) BS01 rna ? GO:0003735 ... A0A077ULC5 31391518
    544773 6s13:U (3.58) BS02 rna ? GO:0003735 ... A0A077ULC5 31391518
    544774 6s13:V (3.58) BS01 rna ? GO:0003735 ... A0A077URJ8 31391518
    544775 6s13:W (3.58) BS01 rna ? GO:0003735 ... A0A077W1J5 31391518
    544776 6s13:X (3.58) BS01 rna ? GO:0003735 ... W8UVN7 31391518
    544777 6s13:Y (3.58) BS01 rna ? GO:0003735 ... A0A380EL30 31391518
    544778 6s13:Z (3.58) BS01 rna N/A GO:0003735 ... N/A 31391518
    544779 6s13:b (3.58) BS01 rna ? GO:0003735 ... A0A2X2M020 31391518
    544780 6s13:c (3.58) BS01 rna ? GO:0003676 ... A0A077UU26 31391518
    544781 6s13:d (3.58) BS01 rna ? GO:0003723 ... W8TVK2 31391518
    544782 6s13:e (3.58) BS01 rna ? GO:0003723 ... W8TUC9 31391518
    544783 6s13:f (3.58) BS01 rna ? GO:0003735 ... W8TPC6 31391518
    544784 6s13:g (3.58) BS01 rna ? GO:0000049 ... A0A077VHU6 31391518
    544785 6s13:h (3.58) BS01 rna ? GO:0003735 ... W8U8T8 31391518
    544786 6s13:i (3.58) BS01 rna ? GO:0003723 ... A0A1Q4GY48 31391518
    544787 6s13:j (3.58) BS01 rna ? GO:0000049 ... A0A0H2K0A0 31391518
    544788 6s13:k (3.58) BS01 rna ? GO:0003735 ... A0A077UKD6 31391518
    544789 6s13:l (3.58) BS01 rna ? GO:0003735 ... N/A 31391518
    544790 6s13:m (3.58) BS01 rna ? GO:0003676 ... W8U8U6 31391518
    544791 6s13:n (3.58) BS01 rna ? GO:0003735 ... A0A077UGW7 31391518
    544792 6s13:o (3.58) BS01 rna ? GO:0003735 ... W8U6H8 31391518
    544793 6s13:p (3.58) BS01 rna ? GO:0003735 ... W8U6K4 31391518
    544794 6s13:q (3.58) BS01 rna ? GO:0003735 ... A0A077VLD5 31391518
    544795 6s13:r (3.58) BS01 rna ? GO:0003735 ... A0A077UZF4 31391518
    544796 6s13:s (3.58) BS01 rna ? GO:0003723 ... N/A 31391518
    544797 6s13:t (3.58) BS01 rna ? GO:0003723 ... W8UXC3 31391518
    544798 6s13:u (3.58) BS01 rna N/A GO:0003735 ... N/A 31391518
    544799 6s13:v (3.58) BS01 rna ? GO:0044238 ... D2Z097 31391518
    544800 6s14:A (1.05) BS01 KQW 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).