SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    546601 6sem:A (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546602 6sem:B (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546603 6sem:C (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546604 6sem:D (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546605 6sen:A (1.65) BS01 peptide ? N/A Q15561 31697419
    546606 6sen:B (1.65) BS01 peptide ? N/A Q15561 31697419
    546607 6seo:A (2.55) BS01 peptide ? N/A Q15561 31697419
    546608 6sep:A (2.2) BS01 NAD 2.5.1.44 GO:0016740 ... O32323 34605434
    546609 6sep:B (2.2) BS01 NAD 2.5.1.44 GO:0016740 ... O32323 34605434
    546610 6ses:A (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 32591477
    546611 6ses:B (2.0) BS01 GDP ? GO:0000226 ... Q6B856 32591477
    546612 6ses:B (2.0) BS02 L95 ? GO:0000226 ... Q6B856 32591477
    546613 6ses:C (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 32591477
    546614 6ses:D (2.0) BS01 GDP ? GO:0000226 ... Q6B856 32591477
    546615 6ses:D (2.0) BS02 L95 ? GO:0000226 ... Q6B856 32591477
    546616 6ses:F (2.0) BS01 ACP N/A GO:0036211 ... N/A 32591477
    546617 6ses:F (2.0) BS02 MG N/A GO:0036211 ... N/A 32591477
    546618 6seu:A (1.95) BS01 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546619 6seu:A (1.95) BS02 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546620 6sev:A (2.0) BS01 ZN 1.16.-.- GO:0005737 ... P80725 31433627
    546621 6sev:B (2.0) BS01 ZN 1.16.-.- GO:0005737 ... P80725 31433627
    546622 6sev:D (2.0) BS01 ZN 1.16.-.- GO:0005737 ... P80725 31433627
    546623 6sev:E (2.0) BS01 ZN 1.16.-.- GO:0005737 ... P80725 31433627
    546624 6sew:A (2.12) BS01 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546625 6sex:A (1.78) BS01 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546626 6sex:A (1.78) BS02 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546627 6sey:A (1.23) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546628 6sey:A (1.23) BS02 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546629 6sey:A (1.23) BS03 BGC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546630 6sey:A (1.23) BS04 GLC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546631 6sey:A (1.23) BS05 L9B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: IC50=15nM
    546632 6sey:A (1.23) BS06 L9B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: IC50=15nM
    546633 6sez:A (2.22) BS01 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546634 6sez:A (2.22) BS02 AU 3.2.1.17 GO:0003796 ... P00698 31490509
    546635 6sf0:A (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546636 6sf0:A (3.01) BS02 NAP N/A GO:0004499 ... N/A 31873300
    546637 6sf0:B (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546638 6sf0:B (3.01) BS02 NAP N/A GO:0004499 ... N/A 31873300
    546639 6sf0:C (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546640 6sf0:C (3.01) BS02 NAP N/A GO:0004499 ... N/A 31873300
    546641 6sf0:D (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    546642 6sf0:D (3.01) BS02 NAP N/A GO:0004499 ... N/A 31873300
    546643 6sf0:D (3.01) BS03 MA4 N/A GO:0004499 ... N/A 31873300
    546644 6sf5:A (1.9) BS01 MN 1.17.4.1 GO:0009263 ... A3XHF9 31414238
    546645 6sf5:A (1.9) BS02 MN 1.17.4.1 GO:0009263 ... A3XHF9 31414238
    546646 6sf5:B (1.9) BS01 MN 1.17.4.1 GO:0009263 ... A3XHF9 31414238
    546647 6sf5:B (1.9) BS02 MN 1.17.4.1 GO:0009263 ... A3XHF9 31414238
    546648 6sf6:A (1.9) BS01 peptide N/A N/A N/A N/A
    546649 6sf6:H (1.9) BS01 peptide N/A N/A N/A N/A
    546650 6sf6:L (1.9) BS01 peptide N/A N/A N/A N/A
    546651 6sf8:A (1.62) BS01 47Y ? GO:0004659 ... Q8WS26 N/A
    546652 6sf9:A (1.59) BS01 CFF ? GO:0004659 ... Q8WS26 N/A
    546653 6sfa:A (1.9) BS01 MN ? GO:0004659 ... Q8WS26 N/A
    546654 6sfb:A (1.52) BS01 L9W ? N/A O75530 31525019
    546655 6sfb:B (1.52) BS01 L9W ? N/A O75530 31525019
    546656 6sfc:A (2.0) BS01 CA ? N/A O75530 31525019
    546657 6sfc:A (2.0) BS02 L9W ? N/A O75530 31525019
    546658 6sfc:B (2.0) BS01 L9T ? N/A O75530 31525019 MOAD: Kd=5.2uM
    546659 6sfe:A (1.08) BS01 L9Z 4.2.1.10 GO:0003855 ... P24670 32259333
    546660 6sfe:B (1.08) BS01 L9Z 4.2.1.10 GO:0003855 ... P24670 32259333
    546661 6sfg:A (1.23) BS01 FQZ 4.2.1.10 GO:0003855 ... P24670 32259333
    546662 6sfg:A (1.23) BS02 FSQ 4.2.1.10 GO:0003855 ... P24670 32259333
    546663 6sfh:A (1.73) BS01 L9Z 4.2.1.10 GO:0003855 ... Q2YWJ9 32259333
    546664 6sfh:B (1.73) BS01 L9Z 4.2.1.10 GO:0003855 ... Q2YWJ9 32259333
    546665 6sfi:A (1.6) BS01 LB5 2.7.11.24 GO:0000077 ... Q16539 31702918 BindingDB: IC50=26nM
    546666 6sfj:A (1.95) BS01 LBB 2.7.11.24 GO:0000077 ... Q16539 31702918 BindingDB: IC50=18nM
    546667 6sfk:A (1.8) BS01 LB8 2.7.11.24 GO:0000077 ... Q16539 31702918 BindingDB: IC50=71nM
    546668 6sfo:A (1.75) BS01 LBE 2.7.11.24 GO:0000077 ... Q16539 N/A BindingDB: IC50=3.7nM
    546669 6sfq:A (1.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546670 6sfq:A (1.0) BS02 7Q1 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: Kd=2600nM
    546671 6sfr:A (1.917) BS01 LBK ? GO:0005085 ... Q07889 32816843
    546672 6sfr:B (1.917) BS01 LBK ? GO:0005085 ... Q07889 32816843
    546673 6sft:A (-1.00) BS01 C2E ? N/A A0A0H3CCM2 32611811
    546674 6sft:A (-1.00) BS02 C2E ? N/A A0A0H3CCM2 32611811
    546675 6sfu:A (1.04) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546676 6sfu:A (1.04) BS02 LBQ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546677 6sfu:A (1.04) BS03 LBQ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546678 6sg0:A (1.13) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546679 6sg0:A (1.13) BS02 FUN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A BindingDB: Ki=6.5e+4nM
    546680 6sg2:AAA (1.65) BS01 SF4 N/A GO:0005506 ... N/A 32488975
    546681 6sg2:AAA (1.65) BS02 SF4 N/A GO:0005506 ... N/A 32488975
    546682 6sg2:AAA (1.65) BS03 SF4 N/A GO:0005506 ... N/A 32488975
    546683 6sg2:AAA (1.65) BS04 LFH N/A GO:0005506 ... N/A 32488975
    546684 6sg6:A (0.98) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546685 6sg6:A (0.98) BS02 LC8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    546686 6sg8:A (2.5) BS01 CA ? GO:0004308 ... W5SB61 31591233
    546687 6sg8:B (2.5) BS01 CA ? GO:0004308 ... W5SB61 31591233
    546688 6sg9:CC (3.1) BS01 peptide N/A N/A N/A 31515389
    546689 6sg9:CI (3.1) BS01 rna ? GO:0003735 ... Q57W62 31515389
    546690 6sg9:CK (3.1) BS01 rna ? GO:0003735 ... Q389T7 31515389
    546691 6sg9:CN (3.1) BS01 rna ? GO:0005739 ... Q580I0 31515389
    546692 6sg9:CS (3.1) BS01 rna N/A N/A N/A 31515389
    546693 6sg9:Cg (3.1) BS01 GTP ? GO:0003735 ... Q585C2 31515389
    546694 6sg9:Ci (3.1) BS01 peptide ? GO:0005739 ... Q57WW0 31515389
    546695 6sg9:DF (3.1) BS01 rna N/A N/A N/A 31515389
    546696 6sg9:DG (3.1) BS01 rna N/A N/A N/A 31515389
    546697 6sg9:DH (3.1) BS01 rna N/A N/A N/A 31515389
    546698 6sg9:DJ (3.1) BS01 rna ? GO:0005737 ... Q584U8 31515389
    546699 6sg9:DV (3.1) BS01 rna ? GO:0005739 ... Q57UZ6 31515389
    546700 6sg9:DW (3.1) BS01 rna N/A N/A N/A 31515389
    546701 6sg9:DX (3.1) BS01 rna ? GO:0005739 ... Q383G5 31515389
    546702 6sg9:F1 (3.1) BS01 peptide ? GO:0003735 ... Q385R2 31515389
    546703 6sg9:F1 (3.1) BS02 peptide ? GO:0003735 ... Q385R2 31515389
    546704 6sg9:F1 (3.1) BS03 rna ? GO:0003735 ... Q385R2 31515389
    546705 6sg9:F1 (3.1) BS04 SAH ? GO:0003735 ... Q385R2 31515389
    546706 6sg9:F4 (3.1) BS01 peptide N/A N/A N/A 31515389
    546707 6sg9:F4 (3.1) BS02 peptide N/A N/A N/A 31515389
    546708 6sg9:F4 (3.1) BS03 peptide N/A N/A N/A 31515389
    546709 6sg9:FD (3.1) BS01 peptide ? GO:0005739 ... Q583U2 31515389
    546710 6sg9:FD (3.1) BS02 peptide ? GO:0005739 ... Q583U2 31515389
    546711 6sg9:FF (3.1) BS01 peptide 2.1.1.- GO:0005739 ... Q57W60 31515389
    546712 6sg9:FF (3.1) BS02 rna 2.1.1.- GO:0005739 ... Q57W60 31515389
    546713 6sg9:FF (3.1) BS03 peptide 2.1.1.- GO:0005739 ... Q57W60 31515389
    546714 6sg9:FF (3.1) BS04 SAH 2.1.1.- GO:0005739 ... Q57W60 31515389
    546715 6sg9:FG (3.1) BS01 rna N/A N/A N/A 31515389
    546716 6sg9:FG (3.1) BS02 ZN N/A N/A N/A 31515389
    546717 6sg9:FI (3.1) BS01 peptide N/A N/A N/A 31515389
    546718 6sg9:FI (3.1) BS02 peptide N/A N/A N/A 31515389
    546719 6sg9:FI (3.1) BS03 peptide N/A N/A N/A 31515389
    546720 6sg9:FI (3.1) BS04 peptide N/A N/A N/A 31515389
    546721 6sg9:FJ (3.1) BS01 peptide ? N/A D0A8R9 31515389
    546722 6sg9:FL (3.1) BS01 rna N/A N/A N/A 31515389
    546723 6sg9:FL (3.1) BS02 ZN N/A N/A N/A 31515389
    546724 6sg9:FL (3.1) BS03 ZN N/A N/A N/A 31515389
    546725 6sg9:FV (3.1) BS01 peptide ? GO:0005759 ... Q38C60 31515389
    546726 6sg9:Fa (3.1) BS01 rna ? GO:0005739 ... Q57VU7 31515389
    546727 6sg9:Fe (3.1) BS01 peptide ? GO:0005737 ... Q387L0 31515389
    546728 6sg9:Fe (3.1) BS02 ZN ? GO:0005737 ... Q387L0 31515389
    546729 6sg9:Ui (3.1) BS01 peptide N/A N/A N/A 31515389
    546730 6sga:CE (3.1) BS01 peptide N/A GO:0003735 ... N/A 31515389
    546731 6sga:CE (3.1) BS02 rna N/A GO:0003735 ... N/A 31515389
    546732 6sga:CF (3.1) BS01 peptide ? GO:0005739 ... Q38BW5 31515389
    546733 6sga:CF (3.1) BS02 rna ? GO:0005739 ... Q38BW5 31515389
    546734 6sga:CH (3.1) BS01 rna N/A GO:0003735 ... N/A 31515389
    546735 6sga:CK (3.1) BS01 rna ? GO:0003735 ... Q389T7 31515389
    546736 6sga:CO (3.1) BS01 rna ? GO:0005739 ... Q4GZ99 31515389
    546737 6sga:CP (3.1) BS01 rna ? GO:0005737 ... Q384N9 31515389
    546738 6sga:CQ (3.1) BS01 rna N/A GO:0003735 ... N/A 31515389
    546739 6sga:CR (3.1) BS01 rna N/A N/A N/A 31515389
    546740 6sga:Ca (3.1) BS01 peptide ? GO:0005739 ... Q38DR3 31515389
    546741 6sga:Ca (3.1) BS02 rna ? GO:0005739 ... Q38DR3 31515389
    546742 6sga:Cb (3.1) BS01 peptide N/A N/A N/A 31515389
    546743 6sga:Cd (3.1) BS01 rna ? GO:0005739 ... Q38DK6 31515389
    546744 6sga:Cj (3.1) BS01 rna ? GO:0005739 ... Q57UK0 31515389
    546745 6sga:Cp (3.1) BS01 rna ? GO:0005739 ... Q389L3 31515389
    546746 6sga:DD (3.1) BS01 rna N/A N/A N/A 31515389
    546747 6sga:DL (3.1) BS01 rna N/A N/A N/A 31515389
    546748 6sga:DP (3.1) BS01 rna N/A N/A N/A 31515389
    546749 6sga:DR (3.1) BS01 rna N/A N/A N/A 31515389
    546750 6sga:DU (3.1) BS01 rna N/A N/A N/A 31515389
    546751 6sga:F1 (3.1) BS01 rna ? GO:0003735 ... Q385R2 31515389
    546752 6sga:F2 (3.1) BS01 rna N/A N/A N/A 31515389
    546753 6sga:F3 (3.1) BS01 peptide ? GO:0005739 ... Q38E61 31515389
    546754 6sga:F3 (3.1) BS02 rna ? GO:0005739 ... Q38E61 31515389
    546755 6sga:F5 (3.1) BS01 peptide N/A N/A N/A 31515389
    546756 6sga:F6 (3.1) BS01 peptide ? GO:0005739 ... Q38FQ8 31515389
    546757 6sga:F7 (3.1) BS01 peptide ? GO:0003729 ... Q57UW6 31515389
    546758 6sga:F7 (3.1) BS02 peptide ? GO:0003729 ... Q57UW6 31515389
    546759 6sga:F7 (3.1) BS03 rna ? GO:0003729 ... Q57UW6 31515389
    546760 6sga:F8 (3.1) BS01 rna N/A N/A N/A 31515389
    546761 6sga:F9 (3.1) BS01 rna N/A N/A N/A 31515389
    546762 6sga:FA (3.1) BS01 peptide ? GO:0005739 ... Q386U1 31515389
    546763 6sga:FA (3.1) BS02 peptide ? GO:0005739 ... Q386U1 31515389
    546764 6sga:FA (3.1) BS03 peptide ? GO:0005739 ... Q386U1 31515389
    546765 6sga:FB (3.1) BS01 rna N/A GO:0001522 ... N/A 31515389
    546766 6sga:FC (3.1) BS01 peptide N/A GO:0001522 ... N/A 31515389
    546767 6sga:FE (3.1) BS01 rna N/A N/A N/A 31515389
    546768 6sga:FJ (3.1) BS01 peptide N/A N/A N/A 31515389
    546769 6sga:FJ (3.1) BS02 rna N/A N/A N/A 31515389
    546770 6sga:FM (3.1) BS01 peptide N/A GO:0050661 ... N/A 31515389
    546771 6sga:FO (3.1) BS01 peptide ? GO:0005737 ... Q389F9 31515389
    546772 6sga:FO (3.1) BS02 peptide ? GO:0005737 ... Q389F9 31515389
    546773 6sga:FO (3.1) BS03 peptide ? GO:0005737 ... Q389F9 31515389
    546774 6sga:FO (3.1) BS04 peptide ? GO:0005737 ... Q389F9 31515389
    546775 6sga:FO (3.1) BS05 rna ? GO:0005737 ... Q389F9 31515389
    546776 6sga:FP (3.1) BS01 peptide N/A N/A N/A 31515389
    546777 6sga:FP (3.1) BS02 MG N/A N/A N/A 31515389
    546778 6sga:FQ (3.1) BS01 rna ? GO:0005249 ... Q387P8 31515389
    546779 6sga:FR (3.1) BS01 rna ? GO:0005249 ... Q387P8 31515389
    546780 6sga:FS (3.1) BS01 peptide ? GO:0005249 ... Q387P8 31515389
    546781 6sga:FU (3.1) BS01 rna ? GO:0005249 ... Q387P8 31515389
    546782 6sga:FW (3.1) BS01 rna ? GO:0005739 ... Q38FI3 31515389
    546783 6sga:FW (3.1) BS02 MG ? GO:0005739 ... Q38FI3 31515389
    546784 6sga:FX (3.1) BS01 peptide ? GO:0005737 ... Q57YK5 31515389
    546785 6sga:FX (3.1) BS02 peptide ? GO:0005737 ... Q57YK5 31515389
    546786 6sga:FY (3.1) BS01 rna N/A N/A N/A 31515389
    546787 6sga:Fa (3.1) BS01 rna ? GO:0005739 ... Q57VU7 31515389
    546788 6sga:Fb (3.1) BS01 PM8 ? GO:0005739 ... Q581U4 31515389
    546789 6sga:Fc (3.1) BS01 PM8 ? GO:0000035 ... Q57WW9 31515389
    546790 6sga:Fd (3.1) BS01 rna ? GO:0005739 ... Q581T4 31515389
    546791 6sga:Fd (3.1) BS02 ZN ? GO:0005739 ... Q581T4 31515389
    546792 6sga:UY (3.1) BS01 rna N/A N/A N/A 31515389
    546793 6sgb:CC (3.3) BS01 peptide N/A N/A N/A 31515389
    546794 6sgb:CE (3.3) BS01 peptide N/A GO:0003735 ... N/A 31515389
    546795 6sgb:CE (3.3) BS02 rna N/A GO:0003735 ... N/A 31515389
    546796 6sgb:CF (3.3) BS01 rna ? GO:0005739 ... Q38BW5 31515389
    546797 6sgb:CH (3.3) BS01 rna N/A GO:0003735 ... N/A 31515389
    546798 6sgb:CI (3.3) BS01 rna ? GO:0003735 ... Q57W62 31515389
    546799 6sgb:CK (3.3) BS01 rna ? GO:0003735 ... Q389T7 31515389
    546800 6sgb:CN (3.3) BS01 rna ? GO:0005739 ... Q580I0 31515389

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).