SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    549401 6sv1:R (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549402 6sv1:S (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549403 6sv1:T (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549404 6sv1:T (2.19) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549405 6sv1:U (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549406 6sv1:V (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549407 6sv1:W (2.19) BS01 CA 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549408 6sv1:W (2.19) BS02 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549409 6sv1:X (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549410 6sv1:Y (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549411 6sv1:Z (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549412 6sv1:a (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549413 6sv1:b (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549414 6sv1:b (2.19) BS02 CA 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549415 6sv1:c (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549416 6sv1:d (2.19) BS01 FE 1.16.3.1 GO:0004322 ... Q2RVS1 32878987
    549417 6sv3:A (1.64001) BS01 FEC 4.99.1.9 GO:0004325 ... Q8Y565 31794133
    549418 6sv4:A (3.3) BS01 rna ? GO:0000054 ... P05750 32203490
    549419 6sv4:AA (3.3) BS01 rna ? GO:0000470 ... P17076 32203490
    549420 6sv4:AA (3.3) BS02 rna ? GO:0000470 ... P17076 32203490
    549421 6sv4:AB (3.3) BS01 rna ? GO:0002181 ... P0CX41 32203490
    549422 6sv4:AC (3.3) BS01 rna ? GO:0002181 ... P05745 32203490
    549423 6sv4:AD (3.3) BS01 rna ? GO:0002181 ... P05738 32203490
    549424 6sv4:AE (3.3) BS01 rna ? GO:0003735 ... P04449 32203490
    549425 6sv4:AE (3.3) BS02 rna ? GO:0003735 ... P04449 32203490
    549426 6sv4:AF (3.3) BS01 rna ? GO:0000448 ... P49166 32203490
    549427 6sv4:AF (3.3) BS02 rna ? GO:0000448 ... P49166 32203490
    549428 6sv4:AG (3.3) BS01 rna ? GO:0000027 ... P0C0W9 32203490
    549429 6sv4:AG (3.3) BS02 rna ? GO:0000027 ... P0C0W9 32203490
    549430 6sv4:AH (3.3) BS01 rna ? GO:0000027 ... P04456 32203490
    549431 6sv4:AH (3.3) BS02 rna ? GO:0000027 ... P04456 32203490
    549432 6sv4:AI (3.3) BS01 rna ? GO:0002181 ... P49167 32203490
    549433 6sv4:AJ (3.3) BS01 rna ? GO:0002181 ... Q12690 32203490
    549434 6sv4:AJ (3.3) BS02 rna ? GO:0002181 ... Q12690 32203490
    549435 6sv4:AK (3.3) BS01 rna ? GO:0002181 ... P05743 32203490
    549436 6sv4:AK (3.3) BS02 rna ? GO:0002181 ... P05743 32203490
    549437 6sv4:AL (3.3) BS01 rna ? GO:0002181 ... P04650 32203490
    549438 6sv4:AL (3.3) BS02 rna ? GO:0002181 ... P04650 32203490
    549439 6sv4:AM (3.3) BS01 rna ? GO:0000027 ... P36105 32203490
    549440 6sv4:AN (3.3) BS01 rna ? GO:0002181 ... P0C2H6 32203490
    549441 6sv4:AN (3.3) BS02 rna ? GO:0002181 ... P0C2H6 32203490
    549442 6sv4:AO (3.3) BS01 rna ? GO:0000027 ... P0CH08 32203490
    549443 6sv4:AP (3.3) BS01 rna ? GO:0002181 ... P0CX27 32203490
    549444 6sv4:AP (3.3) BS02 rna ? GO:0002181 ... P0CX27 32203490
    549445 6sv4:AQ (3.3) BS01 rna ? GO:0002181 ... P05748 32203490
    549446 6sv4:AQ (3.3) BS02 rna ? GO:0002181 ... P05748 32203490
    549447 6sv4:AR (3.3) BS01 rna ? GO:0002181 ... P02406 32203490
    549448 6sv4:AT (3.3) BS01 rna ? GO:0002181 ... P0CX25 32203490
    549449 6sv4:AU (3.3) BS01 rna ? GO:0000470 ... P26784 32203490
    549450 6sv4:AV (3.3) BS01 rna ? GO:0002181 ... P05747 32203490
    549451 6sv4:AW (3.3) BS01 rna ? GO:0002181 ... P0CX45 32203490
    549452 6sv4:AW (3.3) BS02 rna ? GO:0002181 ... P0CX45 32203490
    549453 6sv4:AX (3.3) BS01 rna ? GO:0000448 ... P05740 32203490
    549454 6sv4:AX (3.3) BS02 rna ? GO:0000448 ... P05740 32203490
    549455 6sv4:AY (3.3) BS01 rna ? GO:0002181 ... P14120 32203490
    549456 6sv4:Ab (3.3) BS01 rna ? GO:0000054 ... P05750 32203490
    549457 6sv4:Ac (3.3) BS01 rna ? GO:0000054 ... P05750 32203490
    549458 6sv4:B (3.3) BS01 rna ? GO:0003723 ... A0A1L4AA68 32203490
    549459 6sv4:BA (3.3) BS01 rna ? GO:0000027 ... P14126 32203490
    549460 6sv4:BB (3.3) BS01 rna ? GO:0002181 ... P0CX49 32203490
    549461 6sv4:BC (3.3) BS01 rna ? GO:0002181 ... P0C2H8 32203490
    549462 6sv4:BD (3.3) BS01 rna ? GO:0000027 ... P41805 32203490
    549463 6sv4:BD (3.3) BS02 rna ? GO:0000027 ... P41805 32203490
    549464 6sv4:BE (3.3) BS01 rna ? GO:0002181 ... P10664 32203490
    549465 6sv4:BE (3.3) BS02 rna ? GO:0002181 ... P10664 32203490
    549466 6sv4:BF (3.3) BS01 rna ? GO:0002181 ... P0CX82 32203490
    549467 6sv4:BF (3.3) BS02 rna ? GO:0002181 ... P0CX82 32203490
    549468 6sv4:BG (3.3) BS01 rna ? GO:0002181 ... P38061 32203490
    549469 6sv4:BH (3.3) BS01 rna ? GO:0002181 ... P0CX23 32203490
    549470 6sv4:BH (3.3) BS02 rna ? GO:0002181 ... P0CX23 32203490
    549471 6sv4:BI (3.3) BS01 rna ? GO:0000027 ... P26321 32203490
    549472 6sv4:BI (3.3) BS02 rna ? GO:0000027 ... P26321 32203490
    549473 6sv4:BJ (3.3) BS01 rna ? GO:0002181 ... Q02753 32203490
    549474 6sv4:BJ (3.3) BS02 rna ? GO:0002181 ... Q02753 32203490
    549475 6sv4:BK (3.3) BS01 rna ? GO:0000027 ... P05744 32203490
    549476 6sv4:BL (3.3) BS01 rna ? GO:0002181 ... P05749 32203490
    549477 6sv4:BM (3.3) BS01 rna ? GO:0000027 ... Q02326 32203490
    549478 6sv4:BN (3.3) BS01 rna ? GO:0002181 ... P87262 32203490
    549479 6sv4:BO (3.3) BS01 rna ? GO:0000463 ... P05737 32203490
    549480 6sv4:BO (3.3) BS02 rna ? GO:0000463 ... P05737 32203490
    549481 6sv4:BP (3.3) BS01 rna ? GO:0000463 ... P0CX84 32203490
    549482 6sv4:BP (3.3) BS02 rna ? GO:0000463 ... P0CX84 32203490
    549483 6sv4:BU (3.3) BS01 rna ? GO:0000027 ... P05317 32203490
    549484 6sv4:Bb (3.3) BS01 rna ? GO:0003723 ... A0A1L4AA68 32203490
    549485 6sv4:Bc (3.3) BS01 rna ? GO:0003723 ... A0A1L4AA68 32203490
    549486 6sv4:C (3.3) BS01 rna ? N/A Q08745 32203490
    549487 6sv4:Cb (3.3) BS01 rna ? N/A Q08745 32203490
    549488 6sv4:Cc (3.3) BS01 rna ? N/A Q08745 32203490
    549489 6sv4:D (3.3) BS01 rna ? GO:0000028 ... P48589 32203490
    549490 6sv4:Db (3.3) BS01 rna ? GO:0000028 ... P48589 32203490
    549491 6sv4:Dc (3.3) BS01 rna ? GO:0000028 ... P48589 32203490
    549492 6sv4:E (3.3) BS01 rna ? GO:0000028 ... Q01855 32203490
    549493 6sv4:Eb (3.3) BS01 rna ? GO:0000028 ... Q01855 32203490
    549494 6sv4:Ec (3.3) BS01 rna ? GO:0000028 ... Q01855 32203490
    549495 6sv4:F (3.3) BS01 rna ? GO:0000462 ... P0CX51 32203490
    549496 6sv4:Fb (3.3) BS01 rna ? GO:0000462 ... P0CX51 32203490
    549497 6sv4:Fc (3.3) BS01 rna ? GO:0000462 ... P0CX51 32203490
    549498 6sv4:G (3.3) BS01 rna ? GO:0000028 ... P14127 32203490
    549499 6sv4:Gb (3.3) BS01 rna ? GO:0000028 ... P14127 32203490
    549500 6sv4:Gc (3.3) BS01 rna ? GO:0000028 ... P14127 32203490
    549501 6sv4:H (3.3) BS01 rna ? GO:0000054 ... P0CX55 32203490
    549502 6sv4:Hb (3.3) BS01 rna ? GO:0000054 ... P0CX55 32203490
    549503 6sv4:Hc (3.3) BS01 rna ? GO:0000054 ... P0CX55 32203490
    549504 6sv4:I (3.3) BS01 rna ? GO:0000028 ... P07280 32203490
    549505 6sv4:Ib (3.3) BS01 rna ? GO:0000028 ... P07280 32203490
    549506 6sv4:Ic (3.3) BS01 rna ? GO:0000028 ... P07280 32203490
    549507 6sv4:J (3.3) BS01 rna ? GO:0000462 ... P38701 32203490
    549508 6sv4:Jb (3.3) BS01 rna ? GO:0000462 ... P38701 32203490
    549509 6sv4:Jc (3.3) BS01 rna ? GO:0000462 ... P38701 32203490
    549510 6sv4:K (3.3) BS01 rna ? GO:0002181 ... Q3E792 32203490
    549511 6sv4:Kb (3.3) BS01 rna ? GO:0002181 ... Q3E792 32203490
    549512 6sv4:Kc (3.3) BS01 rna ? GO:0002181 ... Q3E792 32203490
    549513 6sv4:L (3.3) BS01 rna ? GO:0000028 ... P0C0X0 32203490
    549514 6sv4:Lb (3.3) BS01 rna ? GO:0000028 ... P0C0X0 32203490
    549515 6sv4:Lc (3.3) BS01 rna ? GO:0000028 ... P0C0X0 32203490
    549516 6sv4:M (3.3) BS01 rna ? GO:0002181 ... P41057 32203490
    549517 6sv4:Mb (3.3) BS01 rna ? GO:0002181 ... P41057 32203490
    549518 6sv4:Mc (3.3) BS01 rna ? GO:0002181 ... P41057 32203490
    549519 6sv4:N (3.3) BS01 rna ? GO:0000028 ... P05759 32203490
    549520 6sv4:Nb (3.3) BS01 rna ? GO:0000028 ... P05759 32203490
    549521 6sv4:Nc (3.3) BS01 rna ? GO:0000028 ... P05759 32203490
    549522 6sv4:O (3.3) BS01 rna ? GO:0001965 ... P38011 32203490
    549523 6sv4:Ob (3.3) BS01 rna ? GO:0001965 ... P38011 32203490
    549524 6sv4:Oc (3.3) BS01 rna ? GO:0001965 ... P38011 32203490
    549525 6sv4:P (3.3) BS01 rna ? GO:0000028 ... P32905 32203490
    549526 6sv4:Pb (3.3) BS01 rna ? GO:0000028 ... P32905 32203490
    549527 6sv4:Pc (3.3) BS01 rna ? GO:0000028 ... P32905 32203490
    549528 6sv4:Q (3.3) BS01 rna ? GO:0000462 ... P33442 32203490
    549529 6sv4:Qb (3.3) BS01 rna ? GO:0000462 ... P33442 32203490
    549530 6sv4:Qb (3.3) BS02 rna ? GO:0000462 ... P33442 32203490
    549531 6sv4:Qc (3.3) BS01 rna ? GO:0000462 ... P33442 32203490
    549532 6sv4:Qc (3.3) BS02 rna ? GO:0000462 ... P33442 32203490
    549533 6sv4:R (3.3) BS01 rna ? GO:0000054 ... P25443 32203490
    549534 6sv4:Rb (3.3) BS01 rna ? GO:0000054 ... P25443 32203490
    549535 6sv4:Rc (3.3) BS01 rna ? GO:0000054 ... P25443 32203490
    549536 6sv4:S (3.3) BS01 rna ? GO:0002181 ... P0CX35 32203490
    549537 6sv4:Sb (3.3) BS01 rna ? GO:0002181 ... P0CX35 32203490
    549538 6sv4:Sb (3.3) BS02 rna ? GO:0002181 ... P0CX35 32203490
    549539 6sv4:Sc (3.3) BS01 rna ? GO:0002181 ... P0CX35 32203490
    549540 6sv4:Sc (3.3) BS02 rna ? GO:0002181 ... P0CX35 32203490
    549541 6sv4:T (3.3) BS01 rna ? GO:0000462 ... P0CX37 32203490
    549542 6sv4:Tb (3.3) BS01 rna ? GO:0000462 ... P0CX37 32203490
    549543 6sv4:Tc (3.3) BS01 rna ? GO:0000462 ... P0CX37 32203490
    549544 6sv4:U (3.3) BS01 rna ? GO:0002181 ... P26786 32203490
    549545 6sv4:Ub (3.3) BS01 rna ? GO:0002181 ... P26786 32203490
    549546 6sv4:Uc (3.3) BS01 rna ? GO:0002181 ... P26786 32203490
    549547 6sv4:V (3.3) BS01 rna ? GO:0000462 ... P0CX39 32203490
    549548 6sv4:V (3.3) BS02 rna ? GO:0000462 ... P0CX39 32203490
    549549 6sv4:Vb (3.3) BS01 rna ? GO:0000462 ... P0CX39 32203490
    549550 6sv4:Vb (3.3) BS02 rna ? GO:0000462 ... P0CX39 32203490
    549551 6sv4:Vc (3.3) BS01 rna ? GO:0000462 ... P0CX39 32203490
    549552 6sv4:Vc (3.3) BS02 rna ? GO:0000462 ... P0CX39 32203490
    549553 6sv4:W (3.3) BS01 rna ? GO:0000462 ... O13516 32203490
    549554 6sv4:Wb (3.3) BS01 rna ? GO:0000462 ... O13516 32203490
    549555 6sv4:Wc (3.3) BS01 rna ? GO:0000462 ... O13516 32203490
    549556 6sv4:Wc (3.3) BS02 rna ? GO:0000462 ... O13516 32203490
    549557 6sv4:X (3.3) BS01 rna ? GO:0000028 ... P0CX47 32203490
    549558 6sv4:XA (3.3) BS01 rna ? GO:0000470 ... P17076 32203490
    549559 6sv4:XA (3.3) BS02 rna ? GO:0000470 ... P17076 32203490
    549560 6sv4:XB (3.3) BS01 rna ? GO:0002181 ... P0CX41 32203490
    549561 6sv4:XC (3.3) BS01 rna ? GO:0002181 ... P05745 32203490
    549562 6sv4:XD (3.3) BS01 rna ? GO:0002181 ... P05738 32203490
    549563 6sv4:XE (3.3) BS01 rna ? GO:0003735 ... P04449 32203490
    549564 6sv4:XE (3.3) BS02 rna ? GO:0003735 ... P04449 32203490
    549565 6sv4:XF (3.3) BS01 rna ? GO:0000448 ... P49166 32203490
    549566 6sv4:XF (3.3) BS02 rna ? GO:0000448 ... P49166 32203490
    549567 6sv4:XG (3.3) BS01 rna ? GO:0000027 ... P0C0W9 32203490
    549568 6sv4:XG (3.3) BS02 rna ? GO:0000027 ... P0C0W9 32203490
    549569 6sv4:XH (3.3) BS01 rna ? GO:0000027 ... P04456 32203490
    549570 6sv4:XH (3.3) BS02 rna ? GO:0000027 ... P04456 32203490
    549571 6sv4:XI (3.3) BS01 rna ? GO:0002181 ... P49167 32203490
    549572 6sv4:XJ (3.3) BS01 rna ? GO:0002181 ... Q12690 32203490
    549573 6sv4:XJ (3.3) BS02 rna ? GO:0002181 ... Q12690 32203490
    549574 6sv4:XK (3.3) BS01 rna ? GO:0002181 ... P05743 32203490
    549575 6sv4:XK (3.3) BS02 rna ? GO:0002181 ... P05743 32203490
    549576 6sv4:XL (3.3) BS01 rna ? GO:0002181 ... P04650 32203490
    549577 6sv4:XL (3.3) BS02 rna ? GO:0002181 ... P04650 32203490
    549578 6sv4:XM (3.3) BS01 rna ? GO:0000027 ... P36105 32203490
    549579 6sv4:XN (3.3) BS01 rna ? GO:0002181 ... P0C2H6 32203490
    549580 6sv4:XN (3.3) BS02 rna ? GO:0002181 ... P0C2H6 32203490
    549581 6sv4:XO (3.3) BS01 rna ? GO:0000027 ... P0CH08 32203490
    549582 6sv4:XP (3.3) BS01 rna ? GO:0002181 ... P0CX27 32203490
    549583 6sv4:XP (3.3) BS02 rna ? GO:0002181 ... P0CX27 32203490
    549584 6sv4:XQ (3.3) BS01 rna ? GO:0002181 ... P05748 32203490
    549585 6sv4:XQ (3.3) BS02 rna ? GO:0002181 ... P05748 32203490
    549586 6sv4:XR (3.3) BS01 rna ? GO:0002181 ... P02406 32203490
    549587 6sv4:XT (3.3) BS01 rna ? GO:0002181 ... P0CX25 32203490
    549588 6sv4:XT (3.3) BS02 rna ? GO:0002181 ... P0CX25 32203490
    549589 6sv4:XU (3.3) BS01 rna ? GO:0000470 ... P26784 32203490
    549590 6sv4:XV (3.3) BS01 rna ? GO:0002181 ... P05747 32203490
    549591 6sv4:XW (3.3) BS01 rna ? GO:0002181 ... P0CX45 32203490
    549592 6sv4:XW (3.3) BS02 rna ? GO:0002181 ... P0CX45 32203490
    549593 6sv4:XX (3.3) BS01 rna ? GO:0000448 ... P05740 32203490
    549594 6sv4:XX (3.3) BS02 rna ? GO:0000448 ... P05740 32203490
    549595 6sv4:XY (3.3) BS01 rna ? GO:0002181 ... P14120 32203490
    549596 6sv4:Xb (3.3) BS01 rna ? GO:0000028 ... P0CX47 32203490
    549597 6sv4:Xc (3.3) BS01 rna ? GO:0000028 ... P0CX47 32203490
    549598 6sv4:Y (3.3) BS01 rna ? GO:0000462 ... P05756 32203490
    549599 6sv4:Y (3.3) BS02 rna ? GO:0000462 ... P05756 32203490
    549600 6sv4:YA (3.3) BS01 rna ? GO:0000027 ... P14126 32203490

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).