SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    550001 6sy0:A (3.102) BS02 dna ? N/A C6KSN9 N/A
    550002 6sy0:B (3.102) BS01 dna ? N/A C6KSN9 N/A
    550003 6sy0:B (3.102) BS02 dna ? N/A C6KSN9 N/A
    550004 6sy0:C (3.102) BS01 dna ? N/A C6KSN9 N/A
    550005 6sy0:C (3.102) BS02 dna ? N/A C6KSN9 N/A
    550006 6sy1:A (1.87) BS01 TPP 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550007 6sy1:A (1.87) BS02 MG 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550008 6sy1:A (1.87) BS03 TPP 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550009 6sy1:B (1.87) BS01 TPP 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550010 6sy1:B (1.87) BS02 TPP 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550011 6sy1:B (1.87) BS03 MG 1.2.4.- GO:0002244 ... Q96HY7 32695416
    550012 6sy3:A (0.95) BS01 CA 3.4.21.4 GO:0004252 ... P00760 32011145
    550013 6sy3:A (0.95) BS02 LXW 3.4.21.4 GO:0004252 ... P00760 32011145 MOAD: Ki=497uM
    550014 6sy4:A (2.695) BS01 rna ? GO:0000976 ... P04483 32052019
    550015 6sy4:B (2.695) BS01 rna ? GO:0000976 ... P04483 32052019
    550016 6sy6:A (2.9) BS01 rna ? GO:0000976 ... P04483 32052019
    550017 6sy6:B (2.9) BS01 rna ? GO:0000976 ... P04483 32052019
    550018 6sy7:A (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550019 6sy7:A (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550020 6sy7:B (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550021 6sy7:B (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550022 6sy7:C (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550023 6sy7:C (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550024 6sy7:D (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550025 6sy7:D (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550026 6sy7:E (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550027 6sy7:E (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550028 6sy7:F (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550029 6sy7:F (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550030 6sy7:G (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550031 6sy7:G (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550032 6sy7:H (2.75) BS01 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550033 6sy7:H (2.75) BS02 AMP 2.7.1.11 GO:0003872 ... O15648 31838765
    550034 6sy8:A (2.08) BS01 ZN 3.1.13.- N/A Q5S581 N/A
    550035 6sy8:B (2.08) BS01 ZN 3.1.13.- N/A Q5S581 N/A
    550036 6sya:A (2.27) BS01 LY8 ? GO:0016787 ... A0A2K8JN75 33995922
    550037 6sya:B (2.27) BS01 LY8 ? GO:0016787 ... A0A2K8JN75 33995922
    550038 6syb:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    550039 6syb:A (1.6) BS02 LYQ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    550040 6syc:A (1.38) BS01 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550041 6syc:A (1.38) BS02 IMD 3.2.1.17 GO:0003796 ... P00698 32876060
    550042 6syc:B (1.38) BS01 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550043 6syc:B (1.38) BS02 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550044 6syc:B (1.38) BS03 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550045 6syc:B (1.38) BS04 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550046 6syd:A (1.1) BS01 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550047 6sye:A (0.97) BS01 LYE 3.2.1.17 GO:0003796 ... P00698 32876060
    550048 6syf:A (1.9) BS01 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550049 6syf:A (1.9) BS02 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550050 6syf:B (1.9) BS01 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550051 6syf:B (1.9) BS02 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550052 6syf:C (1.9) BS01 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550053 6syf:C (1.9) BS02 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550054 6syf:D (1.9) BS01 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550055 6syf:D (1.9) BS02 peptide 2.3.2.- GO:0000122 ... P63279 32929246
    550056 6syi:A (1.6) BS01 peptide 3.1.-.- GO:0003723 ... D4HIS2 33166574
    550057 6syl:A (2.95) BS01 H7N ? GO:0016787 ... A0A2K8JN75 33306346
    550058 6syl:B (2.95) BS01 H7N ? GO:0016787 ... A0A2K8JN75 33306346
    550059 6sym:A (1.6302) BS01 ZN 1.8.4.12 GO:0005506 ... P0A746 N/A
    550060 6sym:B (1.6302) BS01 ZN 1.8.4.12 GO:0005506 ... P0A746 N/A
    550061 6syn:A (2.63) BS01 CB9 3.4.16.4 GO:0000917 ... A0A3N4B5A3 N/A
    550062 6syo:LLL (1.25) BS01 SF4 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550063 6syo:LLL (1.25) BS02 FCO 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550064 6syo:LLL (1.25) BS03 MG 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550065 6syo:LLL (1.25) BS04 OXY 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550066 6syo:MMM (1.25) BS01 SF4 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550067 6syo:MMM (1.25) BS02 FCO 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550068 6syo:MMM (1.25) BS03 MG 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550069 6syo:MMM (1.25) BS04 OXY 1.12.99.6 GO:0005515 ... P0ACE0 N/A
    550070 6syo:SSS (1.25) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550071 6syo:SSS (1.25) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550072 6syo:SSS (1.25) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550073 6syo:TTT (1.25) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550074 6syo:TTT (1.25) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550075 6syo:TTT (1.25) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550076 6syp:AAA (1.8) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 N/A
    550077 6syp:AAA (1.8) BS02 M0B 1.3.5.2 GO:0004151 ... Q02127 N/A
    550078 6syq:A (3.0) BS01 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550079 6syq:A (3.0) BS02 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550080 6syq:A (3.0) BS03 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550081 6syq:A (3.0) BS04 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550082 6syq:A (3.0) BS05 CA 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550083 6syq:B (3.0) BS01 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550084 6syq:B (3.0) BS02 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550085 6syq:B (3.0) BS03 CA 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550086 6syq:B (3.0) BS04 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550087 6syr:A (1.49) BS01 GCU ? N/A B1ZMF4 31740581
    550088 6syr:A (1.49) BS02 MG ? N/A B1ZMF4 31740581
    550089 6sys:A (1.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    550090 6sys:A (1.3) BS02 LZW 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    550091 6sys:A (1.3) BS03 LZW 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    550092 6syt:A (3.45) BS01 IHP 2.7.11.1 GO:0000184 ... Q96Q15 31792449
    550093 6syt:C (3.45) BS01 ATP ? GO:0000184 ... Q9H0W8 31792449
    550094 6syt:C (3.45) BS02 MG ? GO:0000184 ... Q9H0W8 31792449
    550095 6syu:A (1.33) BS01 XYP ? GO:0046872 ... B1ZMF4 31740581
    550096 6syu:A (1.33) BS02 XYP ? GO:0046872 ... B1ZMF4 31740581
    550097 6syu:A (1.33) BS03 XYP ? GO:0046872 ... B1ZMF4 31740581
    550098 6syu:A (1.33) BS04 MG ? GO:0046872 ... B1ZMF4 31740581
    550099 6syv:A (1.12) BS01 MG ? GO:0046872 ... B1ZMF4 31740581
    550100 6syv:A (1.12) BS02 GCU ? GO:0046872 ... B1ZMF4 31740581
    550101 6syv:A (1.12) BS03 BDP ? GO:0046872 ... B1ZMF4 31740581
    550102 6syw:A (0.93) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550103 6syw:A (0.93) BS02 M0K 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550104 6syx:LLL (1.3) BS01 SF4 N/A GO:0008901 ... N/A N/A
    550105 6syx:LLL (1.3) BS02 FCO N/A GO:0008901 ... N/A N/A
    550106 6syx:LLL (1.3) BS03 MG N/A GO:0008901 ... N/A N/A
    550107 6syx:LLL (1.3) BS04 OXY N/A GO:0008901 ... N/A N/A
    550108 6syx:MMM (1.3) BS01 SF4 N/A GO:0008901 ... N/A N/A
    550109 6syx:MMM (1.3) BS02 FCO N/A GO:0008901 ... N/A N/A
    550110 6syx:MMM (1.3) BS03 MG N/A GO:0008901 ... N/A N/A
    550111 6syx:MMM (1.3) BS04 OXY N/A GO:0008901 ... N/A N/A
    550112 6syx:SSS (1.3) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550113 6syx:SSS (1.3) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550114 6syx:SSS (1.3) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550115 6syx:TTT (1.3) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550116 6syx:TTT (1.3) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550117 6syx:TTT (1.3) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550118 6syy:A (1.794) BS01 CU ? GO:0005507 ... O67206 N/A
    550119 6syy:A (1.794) BS02 CU ? GO:0005507 ... O67206 N/A
    550120 6syy:A (1.794) BS03 CU ? GO:0005507 ... O67206 N/A
    550121 6syy:A (1.794) BS04 CU ? GO:0005507 ... O67206 N/A
    550122 6syy:A (1.794) BS05 O ? GO:0005507 ... O67206 N/A
    550123 6syz:A (2.28) BS01 M1E ? GO:0003723 ... Q96MU7 32101404 MOAD: ic50>1000uM
    550124 6syz:B (2.28) BS01 M1E ? GO:0003723 ... Q96MU7 32101404 MOAD: ic50>1000uM
    550125 6sz0:A (1.74) BS01 MG ? GO:0046872 ... B1ZMF4 31740581
    550126 6sz0:A (1.74) BS02 MG ? GO:0046872 ... B1ZMF4 31740581
    550127 6sz1:A (1.75) BS01 M0W ? GO:0003723 ... Q96MU7 32101404 MOAD: ic50>1000uM
    550128 6sz1:B (1.75) BS01 M0W ? GO:0003723 ... Q96MU7 32101404 MOAD: ic50>1000uM
    550129 6sz2:B (1.52) BS01 M0Q ? GO:0003723 ... Q96MU7 32101404
    550130 6sz3:B (1.28) BS01 M1H ? GO:0003723 ... Q96MU7 32101404
    550131 6sz4:A (1.75) BS01 BDP ? GO:0046872 ... B1ZMF4 31740581
    550132 6sz5:A (2.23) BS01 peptide ? GO:0000086 ... P0DP24 31785178
    550133 6sz5:A (2.23) BS02 peptide ? GO:0000086 ... P0DP24 31785178
    550134 6sz5:A (2.23) BS03 CA ? GO:0000086 ... P0DP24 31785178
    550135 6sz5:A (2.23) BS04 CA ? GO:0000086 ... P0DP24 31785178
    550136 6sz5:A (2.23) BS05 CA ? GO:0000086 ... P0DP24 31785178
    550137 6sz5:A (2.23) BS06 CA ? GO:0000086 ... P0DP24 31785178
    550138 6sz6:A (2.988) BS01 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    550139 6sz6:A (2.988) BS02 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    550140 6sz6:A (2.988) BS03 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    550141 6sz6:A (2.988) BS04 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    550142 6sz6:A (2.988) BS05 BGC 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    550143 6sz7:A (2.31) BS01 M1Q ? GO:0003723 ... A0A2K6KCS5 32101404 MOAD: ic50=1615uM
    550144 6sz7:B (2.31) BS01 M1Q ? GO:0003723 ... A0A2K6KCS5 32101404 MOAD: ic50=1615uM
    550145 6sz8:B (1.47) BS01 M1Z ? GO:0003723 ... A0A2K6KCS5 32101404 MOAD: ic50>1000uM
    550146 6sz9:C (3.7) BS01 ZN ? GO:0005737 ... Q5ZYB7 32513920
    550147 6sza:A (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550148 6sza:B (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550149 6sza:B (6.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550150 6sza:C (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550151 6sza:D (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550152 6sza:E (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550153 6sza:E (6.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550154 6sza:F (6.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550155 6szb:A (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550156 6szb:B (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550157 6szb:B (7.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550158 6szb:C (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550159 6szb:C (7.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550160 6szb:D (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550161 6szb:D (7.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550162 6szb:E (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550163 6szb:E (7.0) BS02 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550164 6szb:F (7.0) BS01 ADP 3.6.3.- GO:0005515 ... P31473 31992852
    550165 6szd:LLL (1.5) BS01 F3S N/A GO:0008901 ... N/A N/A
    550166 6szd:LLL (1.5) BS02 SF4 N/A GO:0008901 ... N/A N/A
    550167 6szd:LLL (1.5) BS03 FCO N/A GO:0008901 ... N/A N/A
    550168 6szd:LLL (1.5) BS04 MG N/A GO:0008901 ... N/A N/A
    550169 6szd:MMM (1.5) BS01 F3S N/A GO:0008901 ... N/A N/A
    550170 6szd:MMM (1.5) BS02 SF4 N/A GO:0008901 ... N/A N/A
    550171 6szd:MMM (1.5) BS03 FCO N/A GO:0008901 ... N/A N/A
    550172 6szd:MMM (1.5) BS04 MG N/A GO:0008901 ... N/A N/A
    550173 6szd:SSS (1.5) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550174 6szd:SSS (1.5) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550175 6szd:SSS (1.5) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550176 6szd:TTT (1.5) BS01 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550177 6szd:TTT (1.5) BS02 F3S 1.12.99.6 GO:0008901 ... P69741 N/A
    550178 6szd:TTT (1.5) BS03 SF4 1.12.99.6 GO:0008901 ... P69741 N/A
    550179 6sze:A (2.94) BS01 M2B 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 31749904
    550180 6sze:B (2.94) BS01 M2B 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 31749904
    550181 6szg:A (1.84) BS01 M2K 2.5.1.31 GO:0000287 ... V5VCK8 31929185
    550182 6szg:A (1.84) BS02 M2E 2.5.1.31 GO:0000287 ... V5VCK8 31929185
    550183 6szg:B (1.84) BS01 CA 2.5.1.31 GO:0000287 ... V5VCK8 31929185
    550184 6szh:B (1.65) BS01 CA 2.5.1.31 GO:0000287 ... V5VCK8 31929185
    550185 6szh:B (1.65) BS02 M2H 2.5.1.31 GO:0000287 ... V5VCK8 31929185
    550186 6szi:A (3.0) BS01 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550187 6szi:A (3.0) BS02 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550188 6szi:A (3.0) BS03 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550189 6szi:A (3.0) BS04 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550190 6szi:A (3.0) BS05 CA 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550191 6szi:B (3.0) BS01 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550192 6szi:B (3.0) BS02 GLC 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550193 6szi:B (3.0) BS03 CA 2.4.1.5 GO:0009250 ... Q9RE05 32409580
    550194 6szj:A (2.53) BS01 M5W 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 31749904
    550195 6szj:B (2.53) BS01 M5W 2.7.10.2
    2.7.11.1
    GO:0004672 ... O43353 31749904
    550196 6szk:LLL (1.2) BS01 SF4 N/A GO:0008901 ... N/A N/A
    550197 6szk:LLL (1.2) BS02 FCO N/A GO:0008901 ... N/A N/A
    550198 6szk:LLL (1.2) BS03 MG N/A GO:0008901 ... N/A N/A
    550199 6szk:MMM (1.2) BS01 SF4 N/A GO:0008901 ... N/A N/A
    550200 6szk:MMM (1.2) BS02 FCO N/A GO:0008901 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).