SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    550601 6t24:C (3.7) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 32084355
    550602 6t24:D (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 32084355
    550603 6t24:D (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550604 6t24:D (3.7) BS03 9ZK 3.6.4.- GO:0000287 ... P68135 32084355
    550605 6t24:E (3.7) BS01 9ZK 3.6.4.- GO:0000287 ... P68135 32084355
    550606 6t24:E (3.7) BS02 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550607 6t25:A (3.6) BS01 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550608 6t25:A (3.6) BS02 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550609 6t25:A (3.6) BS03 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550610 6t25:B (3.6) BS01 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550611 6t25:B (3.6) BS02 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550612 6t25:B (3.6) BS03 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550613 6t25:C (3.6) BS01 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550614 6t25:C (3.6) BS02 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550615 6t25:C (3.6) BS03 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550616 6t25:D (3.6) BS01 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550617 6t25:D (3.6) BS02 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550618 6t25:D (3.6) BS03 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550619 6t25:E (3.6) BS01 peptide 3.6.4.- GO:0000287 ... P68135 32084355
    550620 6t25:E (3.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 32084355
    550621 6t26:A (2.265) BS01 ZN ? GO:0004035 ... Q93P54 33102813
    550622 6t26:A (2.265) BS02 ZN ? GO:0004035 ... Q93P54 33102813
    550623 6t26:A (2.265) BS03 MG ? GO:0004035 ... Q93P54 33102813
    550624 6t26:A (2.265) BS04 PO4 ? GO:0004035 ... Q93P54 33102813
    550625 6t26:A (2.265) BS05 MG ? GO:0004035 ... Q93P54 33102813
    550626 6t26:A (2.265) BS06 MG ? GO:0004035 ... Q93P54 33102813
    550627 6t26:B (2.265) BS01 ZN ? GO:0004035 ... Q93P54 33102813
    550628 6t26:B (2.265) BS02 ZN ? GO:0004035 ... Q93P54 33102813
    550629 6t26:B (2.265) BS03 MG ? GO:0004035 ... Q93P54 33102813
    550630 6t26:B (2.265) BS04 PO4 ? GO:0004035 ... Q93P54 33102813
    550631 6t26:B (2.265) BS05 MG ? GO:0004035 ... Q93P54 33102813
    550632 6t26:B (2.265) BS06 MG ? GO:0004035 ... Q93P54 33102813
    550633 6t27:A (1.11) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550634 6t28:AAA (1.55) BS01 M92 2.7.11.17 GO:0004672 ... Q8IU85 32433887
    550635 6t29:AAA (1.484) BS01 M8Z 2.7.11.17 GO:0004672 ... Q8IU85 32433887
    550636 6t2a:A (2.0) BS01 ZN 3.1.13.- N/A P19239 N/A
    550637 6t2a:A (2.0) BS02 MN 3.1.13.- N/A P19239 N/A
    550638 6t2a:B (2.0) BS01 ZN 3.1.13.- N/A P19239 N/A
    550639 6t2a:B (2.0) BS02 MN 3.1.13.- N/A P19239 N/A
    550640 6t2b:A (2.13) BS01 NAD 3.2.1.- GO:0000166 ... B2UQL7 N/A
    550641 6t2b:B (2.13) BS01 NAD 3.2.1.- GO:0000166 ... B2UQL7 N/A
    550642 6t2b:C (2.13) BS01 NAD 3.2.1.- GO:0000166 ... B2UQL7 N/A
    550643 6t2b:D (2.13) BS01 NAD 3.2.1.- GO:0000166 ... B2UQL7 N/A
    550644 6t2c:A (3.52) BS01 rna ? GO:0003723 ... H6QM92 32304664
    550645 6t2c:B (3.52) BS01 rna 2.7.7.48 GO:0001172 ... H6QM91 32304664
    550646 6t2c:C (3.52) BS01 rna ? GO:0003723 ... H6QM90 32304664
    550647 6t2d:A (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 31944488
    550648 6t2e:A (2.4) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 31944488
    550649 6t2f:A (2.09) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 31944488
    550650 6t2f:A (2.09) BS02 M9H 2.3.2.27 GO:0005634 ... Q00987 31944488
    550651 6t2h:A (1.41) BS01 M9N 3.1.1.98 GO:0016787 ... Q6P988 31862412
    550652 6t2i:A (1.61) BS01 JFM 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q04544 32743543
    550653 6t2k:A (1.38) BS01 M9K 3.1.1.98 GO:0016787 ... Q6P988 31862412
    550654 6t2l:A (1.0) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550655 6t2m:A (3.0) BS01 peptide ? GO:0003677 ... Q9PTN2 32787090
    550656 6t2m:A (3.0) BS02 M9Q ? GO:0003677 ... Q9PTN2 32787090
    550657 6t2n:AAA (2.7) BS01 CA ? GO:0004553 ... N/A 32782292
    550658 6t2n:BBB (2.7) BS01 CA ? GO:0004553 ... N/A 32782292
    550659 6t2o:AAA (2.05) BS01 CA N/A GO:0004553 ... N/A 32782292
    550660 6t2o:BBB (2.05) BS01 CA N/A GO:0004553 ... N/A 32782292
    550661 6t2p:AAA (2.1) BS01 CA N/A GO:0004553 ... N/A 32782292
    550662 6t2p:BBB (2.1) BS01 CA N/A GO:0004553 ... N/A 32782292
    550663 6t2q:AAA (2.0) BS01 GAL N/A GO:0004553 ... N/A 32782292
    550664 6t2q:AAA (2.0) BS02 CA N/A GO:0004553 ... N/A 32782292
    550665 6t2q:BBB (2.0) BS01 GAL N/A GO:0004553 ... N/A 32782292
    550666 6t2q:BBB (2.0) BS02 CA N/A GO:0004553 ... N/A 32782292
    550667 6t2s:AAA (3.3) BS01 GAL N/A GO:0004553 ... N/A 32782292
    550668 6t2s:BBB (3.3) BS01 GAL N/A GO:0004553 ... N/A 32782292
    550669 6t2s:CCC (3.3) BS01 GAL N/A GO:0004553 ... N/A 32782292
    550670 6t2t:A (1.3) BS01 GSH 2.5.1.18 GO:0003824 ... Q7JYX0 31845319
    550671 6t2u:B (3.6) BS01 dna 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 31907455
    550672 6t2u:C (3.6) BS01 dna 3.1.11.5 GO:0000724 ... P07648 31907455
    550673 6t2u:D (3.6) BS01 dna 5.6.2.3 GO:0000724 ... P04993 31907455
    550674 6t2v:B (3.8) BS01 dna 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 31907455
    550675 6t2v:C (3.8) BS01 dna 3.1.11.5 GO:0000724 ... P07648 31907455
    550676 6t2v:D (3.8) BS01 dna 5.6.2.3 GO:0000724 ... P04993 31907455
    550677 6t2w:A (1.7) BS01 M9T 2.7.10.1 GO:0004672 ... P07333 31851518 MOAD: ic50=0.00000001M
    550678 6t2y:A (1.8) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550679 6t2y:B (1.8) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550680 6t2z:A (1.35) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550681 6t2z:B (1.35) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550682 6t30:A (1.8) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550683 6t30:B (1.8) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550684 6t31:A (1.35) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550685 6t31:B (1.35) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550686 6t32:A (1.75) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550687 6t32:B (1.75) BS01 HL9 ? GO:0005576 ... P22629 33400831
    550688 6t34:A (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550689 6t34:B (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550690 6t34:C (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550691 6t34:D (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550692 6t34:E (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550693 6t34:F (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550694 6t34:G (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550695 6t34:H (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550696 6t34:I (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550697 6t34:J (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550698 6t34:K (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550699 6t34:L (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550700 6t34:M (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550701 6t34:N (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550702 6t34:O (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550703 6t34:P (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550704 6t34:Q (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550705 6t34:R (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550706 6t34:S (5.2) BS01 rna ? GO:0019028 ... A0A346TKY7 31659175
    550707 6t35:A (1.75) BS01 M9W 3.5.2.6 GO:0008800 ... P00811 35486701
    550708 6t35:A (1.75) BS02 ZN 3.5.2.6 GO:0008800 ... P00811 35486701
    550709 6t36:A (1.86) BS01 peptide 3.1.3.48 GO:0000165 ... P26045 33441627
    550710 6t37:A (2.079) BS01 M9Z 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550711 6t37:B (2.079) BS01 M9Z 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550712 6t37:C (2.079) BS01 M9Z 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550713 6t37:D (2.079) BS01 M9Z 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550714 6t38:A (2.15) BS01 MBK 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550715 6t38:B (2.15) BS01 MBK 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550716 6t38:C (2.15) BS01 MBK 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550717 6t38:D (2.15) BS01 MBK 2.7.7.24 GO:0000166 ... Q9HU22 34757294
    550718 6t3b:A (3.01) BS01 M9T 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 31851518
    550719 6t3c:A (2.62) BS01 MBW 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 31851518
    550720 6t3e:A (2.6) BS01 PRO 1.5.1.21 GO:0000166 ... H3ZMH3 32355045
    550721 6t3e:A (2.6) BS02 NAI 1.5.1.21 GO:0000166 ... H3ZMH3 32355045
    550722 6t3e:B (2.6) BS01 PRO 1.5.1.21 GO:0000166 ... H3ZMH3 32355045
    550723 6t3e:B (2.6) BS02 NAI 1.5.1.21 GO:0000166 ... H3ZMH3 32355045
    550724 6t3g:A (1.63) BS01 JOV 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q04544 32743543
    550725 6t3l:A (2.07) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 32228856
    550726 6t3l:B (2.07) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 32228856
    550727 6t3m:H (1.38) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    550728 6t3m:H (1.38) BS02 MD8 3.4.21.5 GO:0004252 ... P00734 N/A
    550729 6t3m:H (1.38) BS03 MD8 3.4.21.5 GO:0004252 ... P00734 N/A
    550730 6t3p:A (0.97) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550731 6t3p:A (0.97) BS02 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550732 6t3p:A (0.97) BS03 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    550733 6t3q:H (1.33) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 32011145
    550734 6t3q:H (1.33) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 32011145
    550735 6t3q:H (1.33) BS03 M6Q 3.4.21.5 GO:0004252 ... P00734 32011145 MOAD: Ki=379nM
    550736 6t3u:A (2.21) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 32228856
    550737 6t3u:B (2.21) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 32228856
    550738 6t3v:A (1.62) BS01 PLP 2.6.1.- GO:0003824 ... C7E5X4 34204354
    550739 6t3w:A (1.82) BS01 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... P03313 34985963
    550740 6t3w:A (1.82) BS02 SFX 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... P03313 34985963
    550741 6t40:A (1.67) BS01 GLY 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q2LKZ0 31909201
    550742 6t41:A (2.45) BS01 MFE 2.7.11.22
    2.7.11.23
    GO:0004672 ... P49336 31988137
    550743 6t42:AAA (1.95) BS01 DE1 ? GO:0005515 ... P02754 31880900
    550744 6t44:AAA (2.0) BS01 DE1 ? GO:0005576 ... P67976 31880900
    550745 6t44:BBB (2.0) BS01 DE1 ? GO:0005576 ... P67976 31880900
    550746 6t46:A (2.45) BS01 peptide ? N/A E9RIY6 32658272
    550747 6t46:C (2.45) BS01 peptide ? N/A E9RIY6 32658272
    550748 6t46:E (2.45) BS01 peptide ? N/A E9RIY6 32658272
    550749 6t46:G (2.45) BS01 peptide ? N/A E9RIY6 32658272
    550750 6t48:A (2.17) BS01 CYS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q2LKZ0 31909201
    550751 6t48:A (2.17) BS02 GSH 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q2LKZ0 31909201
    550752 6t48:A (2.17) BS03 GLY 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q2LKZ0 31909201
    550753 6t48:C (2.17) BS01 GSH 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... Q2LKZ0 31909201
    550754 6t48:C (2.17) BS02 GLY 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... Q2LKZ0 31909201
    550755 6t49:A (1.56) BS01 MH5 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q04544 32743543 MOAD: Ki=0.37mM
    550756 6t4a:H (1.31) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 32011145
    550757 6t4a:H (1.31) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 32011145
    550758 6t4a:H (1.31) BS03 J5K 3.4.21.5 GO:0004252 ... P00734 32011145 MOAD: Ki=140nM
    550759 6t4c:A (1.8) BS01 GSH 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q2LKZ0 31909201
    550760 6t4c:C (1.8) BS01 GSH 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... Q2LKZ0 31909201
    550761 6t4d:A (2.14) BS01 ZN ? N/A Q8IJ93 33296386
    550762 6t4e:A (1.66) BS01 HWH 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q04544 32743543
    550763 6t4e:B (1.66) BS01 HWH 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q04544 32743543
    550764 6t4g:A (1.93) BS01 CLR ? GO:0003677 ... P51449 33536342 BindingDB: EC50=20nM
    550765 6t4g:A (1.93) BS02 L3E ? GO:0003677 ... P51449 33536342
    550766 6t4h:A (2.9) BS01 AGS 7.4.2.8 GO:0005524 ... Q183M9 32858965
    550767 6t4i:A (1.84) BS01 CLR ? GO:0003677 ... P51449 33536342 BindingDB: EC50=20nM
    550768 6t4i:A (1.84) BS02 4F1 ? GO:0003677 ... P51449 33536342 BindingDB: IC50=7.8nM, EC50=16nM
    550769 6t4j:A (1.79) BS01 MHQ ? GO:0003677 ... P51449 33536342
    550770 6t4j:A (1.79) BS02 L3E ? GO:0003677 ... P51449 33536342
    550771 6t4k:A (1.89) BS01 MHQ ? GO:0003677 ... P51449 33536342
    550772 6t4k:A (1.89) BS02 4F1 ? GO:0003677 ... P51449 33536342 BindingDB: IC50=7.8nM, EC50=16nM
    550773 6t4n:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003
    550774 6t4n:A (1.4) BS02 F1A 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003 MOAD: Kd=14uM
    550775 6t4n:A (1.4) BS03 MJB 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003
    550776 6t4o:A (1.133) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003
    550777 6t4o:A (1.133) BS02 MJ2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003 MOAD: Kd=18uM
    550778 6t4p:A (1.75) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003
    550779 6t4p:A (1.75) BS02 MHK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32971003 MOAD: Kd=2.9uM
    550780 6t4q:LA (2.6) BS01 rna ? GO:0002181 ... P0CX45 31858614
    550781 6t4q:LA (2.6) BS02 rna ? GO:0002181 ... P0CX45 31858614
    550782 6t4q:LA (2.6) BS03 MG ? GO:0002181 ... P0CX45 31858614
    550783 6t4q:LA (2.6) BS04 MG ? GO:0002181 ... P0CX45 31858614
    550784 6t4q:LB (2.6) BS01 rna ? GO:0000027 ... P14126 31858614
    550785 6t4q:LB (2.6) BS02 MG ? GO:0000027 ... P14126 31858614
    550786 6t4q:LC (2.6) BS01 rna ? GO:0002181 ... P10664 31858614
    550787 6t4q:LC (2.6) BS02 rna ? GO:0002181 ... P10664 31858614
    550788 6t4q:LD (2.6) BS01 rna ? GO:0000027 ... P26321 31858614
    550789 6t4q:LD (2.6) BS02 rna ? GO:0000027 ... P26321 31858614
    550790 6t4q:LE (2.6) BS01 rna ? GO:0000027 ... P05739 31858614
    550791 6t4q:LF (2.6) BS01 rna ? GO:0000463 ... P05737 31858614
    550792 6t4q:LF (2.6) BS02 rna ? GO:0000463 ... P05737 31858614
    550793 6t4q:LG (2.6) BS01 rna ? GO:0000470 ... P17076 31858614
    550794 6t4q:LG (2.6) BS02 rna ? GO:0000470 ... P17076 31858614
    550795 6t4q:LH (2.6) BS01 rna ? GO:0002181 ... P05738 31858614
    550796 6t4q:LI (2.6) BS01 rna ? GO:0000027 ... P41805 31858614
    550797 6t4q:LI (2.6) BS02 rna ? GO:0000027 ... P41805 31858614
    550798 6t4q:LI (2.6) BS03 rna ? GO:0000027 ... P41805 31858614
    550799 6t4q:LJ (2.6) BS01 rna ? GO:0000027 ... Q3E757 31858614
    550800 6t4q:LJ (2.6) BS02 rna ? GO:0000027 ... Q3E757 31858614

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).