SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    55001 1uet:A (2.0) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    55002 1uet:A (2.0) BS02 CA 2.7.7.72 GO:0000049 ... O28126 14592988
    55003 1ueu:A (2.0) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    55004 1ueu:A (2.0) BS02 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    55005 1ueu:A (2.0) BS03 CTP 2.7.7.72 GO:0000049 ... O28126 14592988
    55006 1uev:A (2.7) BS01 MG 2.7.7.72 GO:0000049 ... O28126 14592988
    55007 1uev:A (2.7) BS02 ATP 2.7.7.72 GO:0000049 ... O28126 14592988
    55008 1uf2:A (3.5) BS01 peptide ? GO:0005198 ... P22472 14527391
    55009 1uf3:A (2.1) BS01 CA ? N/A P84068 N/A
    55010 1uf3:A (2.1) BS02 CA ? N/A P84068 N/A
    55011 1uf3:B (2.1) BS01 CA ? N/A P84068 N/A
    55012 1uf3:C (2.1) BS01 CA ? N/A P84068 N/A
    55013 1uf3:D (2.1) BS01 CA ? N/A P84068 N/A
    55014 1uf3:D (2.1) BS02 CA ? N/A P84068 N/A
    55015 1uf3:E (2.1) BS01 CA ? N/A P84068 N/A
    55016 1uf3:F (2.1) BS01 CA ? N/A P84068 N/A
    55017 1uf3:F (2.1) BS02 CA ? N/A P84068 N/A
    55018 1uf3:G (2.1) BS01 CA ? N/A P84068 N/A
    55019 1uf3:H (2.1) BS01 CA ? N/A P84068 N/A
    55020 1uf5:A (1.6) BS01 CDT 3.5.1.77 GO:0016811 ... P60327 N/A
    55021 1uf5:B (1.6) BS01 CDT 3.5.1.77 GO:0016811 ... P60327 N/A
    55022 1uf7:A (1.9) BS01 CDV 3.5.1.77 GO:0016811 ... P60327 N/A
    55023 1uf7:B (1.9) BS01 CDV 3.5.1.77 GO:0016811 ... P60327 N/A
    55024 1uf8:A (1.8) BS01 ING 3.5.1.77 GO:0016811 ... P60327 N/A
    55025 1uf8:B (1.8) BS01 ING 3.5.1.77 GO:0016811 ... P60327 N/A
    55026 1uf9:B (2.8) BS01 PO4 2.7.1.24 GO:0004140 ... Q56416 15526298
    55027 1uf9:C (2.8) BS01 ATP 2.7.1.24 GO:0004140 ... Q56416 15526298
    55028 1ufj:A (1.6) BS01 CZM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 15106972
    55029 1ug9:A (2.5) BS01 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55030 1ug9:A (2.5) BS02 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55031 1ug9:A (2.5) BS03 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55032 1ug9:A (2.5) BS04 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55033 1ug9:A (2.5) BS05 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55034 1ug9:A (2.5) BS06 CA 3.2.1.70 GO:0004553 ... Q9LBQ9 14660574
    55035 1uga:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55036 1ugb:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55037 1ugb:A (2.0) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974 BindingDB: Ki=1500000nM
    55038 1ugc:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55039 1ugd:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55040 1uge:A (1.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55041 1ugf:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55042 1ugf:A (2.0) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974 BindingDB: Ki=1500000nM
    55043 1ugg:A (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8987974
    55044 1ugp:A (1.63) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    55045 1ugp:A (1.63) BS02 BUA 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    55046 1ugr:A (1.8) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    55047 1ugs:A (2.0) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 14717710
    55048 1ugw:A (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    55049 1ugw:A (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    55050 1ugw:A (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    55051 1ugw:A (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    55052 1ugw:C (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    55053 1ugw:C (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    55054 1ugw:C (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    55055 1ugw:C (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    55056 1ugw:E (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    55057 1ugw:E (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    55058 1ugw:E (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    55059 1ugw:E (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    55060 1ugw:G (1.7) BS01 peptide ? GO:0019862 ... P18670 12946359
    55061 1ugw:G (1.7) BS02 peptide ? GO:0019862 ... P18670 12946359
    55062 1ugw:G (1.7) BS03 peptide ? GO:0019862 ... P18670 12946359
    55063 1ugw:G (1.7) BS04 GAL ? GO:0019862 ... P18670 12946359 MOAD: Ka=1220M^-1
    55064 1ugx:A (1.6) BS01 peptide ? GO:0019862 ... P18670 12946359
    55065 1ugx:A (1.6) BS02 MGC ? GO:0019862 ... P18670 12946359
    55066 1ugy:A (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    55067 1ugy:A (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    55068 1ugy:A (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    55069 1ugy:A (2.4) BS04 GLC ? GO:0019862 ... P18670 12946359
    55070 1ugy:A (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    55071 1ugy:C (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    55072 1ugy:C (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    55073 1ugy:C (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    55074 1ugy:C (2.4) BS04 GLC ? GO:0019862 ... P18670 12946359
    55075 1ugy:C (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    55076 1ugy:E (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    55077 1ugy:E (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    55078 1ugy:E (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    55079 1ugy:E (2.4) BS04 BGC ? GO:0019862 ... P18670 12946359
    55080 1ugy:E (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    55081 1ugy:G (2.4) BS01 peptide ? GO:0019862 ... P18670 12946359
    55082 1ugy:G (2.4) BS02 peptide ? GO:0019862 ... P18670 12946359
    55083 1ugy:G (2.4) BS03 peptide ? GO:0019862 ... P18670 12946359
    55084 1ugy:G (2.4) BS04 BGC ? GO:0019862 ... P18670 12946359
    55085 1ugy:G (2.4) BS05 GLA ? GO:0019862 ... P18670 12946359
    55086 1uh0:A (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55087 1uh0:A (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55088 1uh0:A (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    55089 1uh0:C (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55090 1uh0:C (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55091 1uh0:C (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    55092 1uh0:E (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55093 1uh0:E (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55094 1uh0:E (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    55095 1uh0:G (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55096 1uh0:G (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55097 1uh0:G (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    55098 1uh1:A (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55099 1uh1:A (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55100 1uh1:A (2.8) BS03 MGC ? GO:0019862 ... P18670 12946359
    55101 1uh1:C (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55102 1uh1:C (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55103 1uh1:C (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    55104 1uh1:E (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55105 1uh1:E (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55106 1uh1:E (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    55107 1uh1:G (2.8) BS01 peptide ? GO:0019862 ... P18670 12946359
    55108 1uh1:G (2.8) BS02 peptide ? GO:0019862 ... P18670 12946359
    55109 1uh1:G (2.8) BS03 AMG ? GO:0019862 ... P18670 12946359
    55110 1uh2:A (2.0) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55111 1uh2:A (2.0) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55112 1uh2:A (2.0) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55113 1uh2:A (2.0) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55114 1uh2:A (2.0) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55115 1uh2:A (2.0) BS06 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55116 1uh2:A (2.0) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55117 1uh2:A (2.0) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55118 1uh2:A (2.0) BS09 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55119 1uh2:A (2.0) BS10 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55120 1uh2:A (2.0) BS11 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55121 1uh3:A (2.6) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55122 1uh3:A (2.6) BS02 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    55123 1uh3:A (2.6) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55124 1uh3:A (2.6) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55125 1uh3:A (2.6) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55126 1uh3:A (2.6) BS06 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    55127 1uh3:A (2.6) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55128 1uh3:A (2.6) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55129 1uh3:A (2.6) BS09 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55130 1uh3:A (2.6) BS10 GLD 3.2.1.135 GO:0004553 ... Q60053 14687576
    55131 1uh3:A (2.6) BS11 ACI 3.2.1.135 GO:0004553 ... Q60053 14687576
    55132 1uh3:A (2.6) BS12 HSD 3.2.1.135 GO:0004553 ... Q60053 14687576
    55133 1uh3:A (2.6) BS13 ACI 3.2.1.135 GO:0004553 ... Q60053 14687576
    55134 1uh3:A (2.6) BS14 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55135 1uh3:A (2.6) BS15 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55136 1uh3:A (2.6) BS16 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55137 1uh4:A (1.8) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55138 1uh4:A (1.8) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55139 1uh4:A (1.8) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55140 1uh4:A (1.8) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55141 1uh4:A (1.8) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55142 1uh4:A (1.8) BS06 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55143 1uh4:A (1.8) BS07 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55144 1uh4:A (1.8) BS08 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55145 1uh4:A (1.8) BS09 BGC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55146 1uh4:A (1.8) BS10 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55147 1uh4:A (1.8) BS11 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55148 1uh4:A (1.8) BS12 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55149 1uh4:A (1.8) BS13 GLC 3.2.1.135 GO:0004553 ... Q60053 14687576
    55150 1uh4:A (1.8) BS14 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55151 1uh4:A (1.8) BS15 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55152 1uh4:A (1.8) BS16 CA 3.2.1.135 GO:0004553 ... Q60053 14687576
    55153 1uh5:A (2.2) BS01 TCL 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426 BindingDB: IC50=200nM
    55154 1uh5:A (2.2) BS02 NAD 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426
    55155 1uh5:B (2.2) BS01 TCL 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426 BindingDB: IC50=200nM
    55156 1uh5:B (2.2) BS02 NAD 1.3.1.9 GO:0004318 ... Q9BJJ9 15381426
    55157 1uha:A (1.5) BS01 CA ? GO:0008061 ... P83790 15039554
    55158 1uhb:A (2.15) BS01 peptide 3.4.21.4 GO:0004252 ... P00761 15106996
    55159 1uhb:A (2.15) BS02 CA 3.4.21.4 GO:0004252 ... P00761 15106996
    55160 1uhb:B (2.15) BS01 peptide 3.4.21.4 GO:0004252 ... P00761 15106996
    55161 1uhd:A (2.0) BS01 peptide 4.1.1.11 GO:0004068 ... P56065 15184017
    55162 1uhe:A (1.55) BS01 peptide 4.1.1.11 GO:0004068 ... P56065 15184017
    55163 1uhe:A (1.55) BS02 NSN 4.1.1.11 GO:0004068 ... P56065 15184017
    55164 1uhh:A (1.8) BS01 CZP ? GO:0005509 ... P02592 15632284
    55165 1uhh:B (1.8) BS01 CZP ? GO:0005509 ... P02592 15632284
    55166 1uhi:A (1.8) BS01 CZI ? GO:0005509 ... P02592 15632284
    55167 1uhi:B (1.8) BS01 CZI ? GO:0005509 ... P02592 15632284
    55168 1uhj:A (1.8) BS01 CZB ? GO:0005509 ... P02592 15632284
    55169 1uhj:B (1.8) BS01 CZB ? GO:0005509 ... P02592 15632284
    55170 1uhk:A (1.6) BS01 CZN ? GO:0005509 ... P02592 15632284
    55171 1uhk:B (1.6) BS01 CZN ? GO:0005509 ... P02592 15632284
    55172 1uhl:A (2.9) BS01 peptide ? GO:0003677 ... P28702 12970175
    55173 1uhl:A (2.9) BS02 MEI ? GO:0003677 ... P28702 12970175
    55174 1uhl:B (2.9) BS01 peptide ? GO:0003677 ... Q13133 12970175
    55175 1uhl:B (2.9) BS02 444 ? GO:0003677 ... Q13133 12970175 BindingDB: IC50=13nM, EC50=10nM, Kd=92nM, Ki=24nM
    55176 1uhn:A (2.1) BS01 CA ? GO:0005509 ... Q8LAS7 12871972
    55177 1uhn:A (2.1) BS02 CA ? GO:0005509 ... Q8LAS7 12871972
    55178 1uho:A (2.5) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 12955149
    55179 1uho:A (2.5) BS02 VDN 3.1.4.35 GO:0004114 ... O76074 12955149 MOAD: Kd~0.6nM
    BindingDB: IC50=0.890000nM, Ki=1nM
    55180 1uhv:A (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    55181 1uhv:B (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    55182 1uhv:C (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    55183 1uhv:D (2.1) BS01 DFX 3.2.1.37 GO:0004553 ... P36906 14659747
    55184 1ui0:A (1.5) BS01 SF4 3.2.2.27 GO:0004844 ... Q5SKC5 14556741
    55185 1ui0:A (1.5) BS02 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    55186 1ui0:A (1.5) BS03 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    55187 1ui1:A (2.8) BS01 SF4 3.2.2.27 GO:0004844 ... Q5SKC5 14556741
    55188 1ui7:A (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55189 1ui7:A (2.0) BS02 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55190 1ui7:B (2.0) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55191 1ui7:B (2.0) BS02 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55192 1ui8:A (1.8) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55193 1ui8:B (1.8) BS01 CU 1.4.3.21 GO:0005507 ... P46881 14979714
    55194 1uib:A (1.76) BS01 NAG 3.2.1.17 GO:0003796 ... P00698 11983077
    55195 1uib:A (1.76) BS02 NAG 3.2.1.17 GO:0003796 ... P00698 11983077
    55196 1uib:A (1.76) BS03 NAG 3.2.1.17 GO:0003796 ... P00698 11983077
    55197 1uih:A (1.75) BS01 NAG 3.2.1.17 GO:0003796 ... P00698 11983077
    55198 1uih:A (1.75) BS02 NAG 3.2.1.17 GO:0003796 ... P00698 11983077
    55199 1uim:A (2.15) BS01 PLP 4.2.3.1 GO:0003941 ... P83823 12952961
    55200 1uim:B (2.15) BS01 PLP 4.2.3.1 GO:0003941 ... P83823 12952961

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).